BLASTX nr result

ID: Coptis24_contig00005332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005332
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267180.2| PREDICTED: probable leucine-rich repeat rece...   101   7e-20
emb|CBI26398.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002525662.1| serine-threonine protein kinase, plant-type,...    96   4e-18
ref|XP_002331914.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002305040.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18

>ref|XP_002267180.2| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g68400-like [Vitis vinifera]
          Length = 633

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/77 (62%), Positives = 62/77 (80%)
 Frame = +3

Query: 27  EKVQNATKRGSDPERMVELEFFDKERPMFDLDDLLRASAEMMGKGKMGSTYKVTIDSGPI 206
           EK +++ +   DPER V LEFFDK+ P+FDLDDLLRASAE+MGKGK+G+TYK T++SG  
Sbjct: 307 EKRRHSWESRGDPERTVALEFFDKDIPVFDLDDLLRASAEVMGKGKLGTTYKATLESGSA 366

Query: 207 VVVKRFKEMSDLDKKEF 257
           V VKR K+++ L KKEF
Sbjct: 367 VAVKRLKDLNGLSKKEF 383


>emb|CBI26398.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/77 (62%), Positives = 62/77 (80%)
 Frame = +3

Query: 27  EKVQNATKRGSDPERMVELEFFDKERPMFDLDDLLRASAEMMGKGKMGSTYKVTIDSGPI 206
           EK +++ +   DPER V LEFFDK+ P+FDLDDLLRASAE+MGKGK+G+TYK T++SG  
Sbjct: 328 EKRRHSWESRGDPERTVALEFFDKDIPVFDLDDLLRASAEVMGKGKLGTTYKATLESGSA 387

Query: 207 VVVKRFKEMSDLDKKEF 257
           V VKR K+++ L KKEF
Sbjct: 388 VAVKRLKDLNGLSKKEF 404


>ref|XP_002525662.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223535098|gb|EEF36780.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 610

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/77 (58%), Positives = 59/77 (76%)
 Frame = +3

Query: 27  EKVQNATKRGSDPERMVELEFFDKERPMFDLDDLLRASAEMMGKGKMGSTYKVTIDSGPI 206
           +K    ++R  DPER VELEFFD+  P+FDLDDLLR+SAE++GKGK+G+TYK  ++S  +
Sbjct: 289 DKKLTLSQRTEDPERRVELEFFDRNIPVFDLDDLLRSSAEVLGKGKLGTTYKSNLESNAV 348

Query: 207 VVVKRFKEMSDLDKKEF 257
           V VKR K M+ L KKEF
Sbjct: 349 VAVKRVKNMNCLSKKEF 365


>ref|XP_002331914.1| predicted protein [Populus trichocarpa] gi|222874586|gb|EEF11717.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/71 (60%), Positives = 56/71 (78%)
 Frame = +3

Query: 45  TKRGSDPERMVELEFFDKERPMFDLDDLLRASAEMMGKGKMGSTYKVTIDSGPIVVVKRF 224
           ++   DPER VEL+FFDK  P+FDLDDLLRASAE++GKGK+G+TYK  ++SG ++ VKR 
Sbjct: 304 SRSAEDPERSVELQFFDKNIPVFDLDDLLRASAEVLGKGKLGTTYKANLESGAVISVKRV 363

Query: 225 KEMSDLDKKEF 257
           + M  L KKEF
Sbjct: 364 EYMDSLSKKEF 374


>ref|XP_002305040.1| predicted protein [Populus trichocarpa] gi|222848004|gb|EEE85551.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/66 (65%), Positives = 54/66 (81%)
 Frame = +3

Query: 60  DPERMVELEFFDKERPMFDLDDLLRASAEMMGKGKMGSTYKVTIDSGPIVVVKRFKEMSD 239
           DPER +EL+FFDK  P+FDLDDLLRASAE++GKGK+G+TY   ++SG +V VKR K M+ 
Sbjct: 277 DPERRIELQFFDKNIPVFDLDDLLRASAEVLGKGKLGTTYSANLESGAVVAVKRVKYMNS 336

Query: 240 LDKKEF 257
           L KKEF
Sbjct: 337 LSKKEF 342


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