BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005325
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18334.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002866251.1| hypothetical protein ARALYDRAFT_495917 [Arab...   138   4e-31
ref|NP_200621.1| RNA recognition motif-containing protein [Arabi...   138   5e-31
gb|AAM98125.1| unknown protein [Arabidopsis thaliana]                 138   5e-31
ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group] g...   132   2e-29

>emb|CBI18334.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/109 (63%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
 Frame = +1

Query: 1   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180
           VGGLGE VT  D+ K  SSLGTVK ++ ++T GRSFAY+DF PSS KSL+KLFS+YNGC 
Sbjct: 188 VGGLGETVTSDDINKMLSSLGTVKVVDIMRTKGRSFAYLDFLPSSAKSLSKLFSTYNGCF 247

Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVA--QDNIDIPEKPKLLTQDK 321
           WKGGRL+LEKAKEHYLVRL REW ED E+A  Q +  I +   ++  DK
Sbjct: 248 WKGGRLKLEKAKEHYLVRLSREWAEDGELAISQPSNSIDKNTNIVASDK 296


>ref|XP_002866251.1| hypothetical protein ARALYDRAFT_495917 [Arabidopsis lyrata subsp.
           lyrata] gi|297312086|gb|EFH42510.1| hypothetical protein
           ARALYDRAFT_495917 [Arabidopsis lyrata subsp. lyrata]
          Length = 728

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/97 (68%), Positives = 74/97 (76%)
 Frame = +1

Query: 1   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180
           VGGLGE V   DL K FS +GTV ++EFV+T GRSFAYVDF PSS  SL KLFS+YNGCV
Sbjct: 15  VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYVDFSPSSTNSLTKLFSTYNGCV 74

Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIP 291
           WKGGRLRLEKAKEHYL RL+REWE     + + I  P
Sbjct: 75  WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAP 111


>ref|NP_200621.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|9759539|dbj|BAB11005.1| unnamed protein product
           [Arabidopsis thaliana] gi|110738487|dbj|BAF01169.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332009617|gb|AED97000.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/97 (67%), Positives = 74/97 (76%)
 Frame = +1

Query: 1   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180
           VGGLGE V   DL K FS +GTV ++EFV+T GRSFAY+DF PSS  SL KLFS+YNGCV
Sbjct: 14  VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSPSSTNSLTKLFSTYNGCV 73

Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIP 291
           WKGGRLRLEKAKEHYL RL+REWE     + + I  P
Sbjct: 74  WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAP 110


>gb|AAM98125.1| unknown protein [Arabidopsis thaliana]
          Length = 748

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/97 (67%), Positives = 74/97 (76%)
 Frame = +1

Query: 1   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180
           VGGLGE V   DL K FS +GTV ++EFV+T GRSFAY+DF PSS  SL KLFS+YNGCV
Sbjct: 14  VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSPSSTNSLTKLFSTYNGCV 73

Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIP 291
           WKGGRLRLEKAKEHYL RL+REWE     + + I  P
Sbjct: 74  WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAP 110


>ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group]
           gi|42409268|dbj|BAD10531.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|113535367|dbj|BAF07750.1| Os02g0138200 [Oryza
           sativa Japonica Group] gi|125538008|gb|EAY84403.1|
           hypothetical protein OsI_05779 [Oryza sativa Indica
           Group] gi|125580747|gb|EAZ21678.1| hypothetical protein
           OsJ_05309 [Oryza sativa Japonica Group]
           gi|215694017|dbj|BAG89216.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 552

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180
           VGG+ E V  ADL+  F+S+G V  +EFV+T+GRSFAYVDF   SDK+L KLFS+YNGC 
Sbjct: 20  VGGISEGVAAADLEAMFASVGRVAGVEFVRTNGRSFAYVDFHCPSDKALAKLFSTYNGCK 79

Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQD---NIDIPEKPKLLTQDK 321
           WKGG+LRLEKAKEHYL RL+REWE++   AQ+   + D+  K + L  +K
Sbjct: 80  WKGGKLRLEKAKEHYLTRLKREWEQEAAAAQEMPASADVESKKEKLELNK 129