BLASTX nr result
ID: Coptis24_contig00005325
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005325 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18334.3| unnamed protein product [Vitis vinifera] 139 2e-31 ref|XP_002866251.1| hypothetical protein ARALYDRAFT_495917 [Arab... 138 4e-31 ref|NP_200621.1| RNA recognition motif-containing protein [Arabi... 138 5e-31 gb|AAM98125.1| unknown protein [Arabidopsis thaliana] 138 5e-31 ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group] g... 132 2e-29 >emb|CBI18334.3| unnamed protein product [Vitis vinifera] Length = 847 Score = 139 bits (351), Expect = 2e-31 Identities = 69/109 (63%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +1 Query: 1 VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180 VGGLGE VT D+ K SSLGTVK ++ ++T GRSFAY+DF PSS KSL+KLFS+YNGC Sbjct: 188 VGGLGETVTSDDINKMLSSLGTVKVVDIMRTKGRSFAYLDFLPSSAKSLSKLFSTYNGCF 247 Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVA--QDNIDIPEKPKLLTQDK 321 WKGGRL+LEKAKEHYLVRL REW ED E+A Q + I + ++ DK Sbjct: 248 WKGGRLKLEKAKEHYLVRLSREWAEDGELAISQPSNSIDKNTNIVASDK 296 >ref|XP_002866251.1| hypothetical protein ARALYDRAFT_495917 [Arabidopsis lyrata subsp. lyrata] gi|297312086|gb|EFH42510.1| hypothetical protein ARALYDRAFT_495917 [Arabidopsis lyrata subsp. lyrata] Length = 728 Score = 138 bits (348), Expect = 4e-31 Identities = 66/97 (68%), Positives = 74/97 (76%) Frame = +1 Query: 1 VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180 VGGLGE V DL K FS +GTV ++EFV+T GRSFAYVDF PSS SL KLFS+YNGCV Sbjct: 15 VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYVDFSPSSTNSLTKLFSTYNGCV 74 Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIP 291 WKGGRLRLEKAKEHYL RL+REWE + + I P Sbjct: 75 WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAP 111 >ref|NP_200621.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gi|9759539|dbj|BAB11005.1| unnamed protein product [Arabidopsis thaliana] gi|110738487|dbj|BAF01169.1| hypothetical protein [Arabidopsis thaliana] gi|332009617|gb|AED97000.1| RNA recognition motif-containing protein [Arabidopsis thaliana] Length = 748 Score = 138 bits (347), Expect = 5e-31 Identities = 65/97 (67%), Positives = 74/97 (76%) Frame = +1 Query: 1 VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180 VGGLGE V DL K FS +GTV ++EFV+T GRSFAY+DF PSS SL KLFS+YNGCV Sbjct: 14 VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSPSSTNSLTKLFSTYNGCV 73 Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIP 291 WKGGRLRLEKAKEHYL RL+REWE + + I P Sbjct: 74 WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAP 110 >gb|AAM98125.1| unknown protein [Arabidopsis thaliana] Length = 748 Score = 138 bits (347), Expect = 5e-31 Identities = 65/97 (67%), Positives = 74/97 (76%) Frame = +1 Query: 1 VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180 VGGLGE V DL K FS +GTV ++EFV+T GRSFAY+DF PSS SL KLFS+YNGCV Sbjct: 14 VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSPSSTNSLTKLFSTYNGCV 73 Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIP 291 WKGGRLRLEKAKEHYL RL+REWE + + I P Sbjct: 74 WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAP 110 >ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group] gi|42409268|dbj|BAD10531.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa Japonica Group] gi|113535367|dbj|BAF07750.1| Os02g0138200 [Oryza sativa Japonica Group] gi|125538008|gb|EAY84403.1| hypothetical protein OsI_05779 [Oryza sativa Indica Group] gi|125580747|gb|EAZ21678.1| hypothetical protein OsJ_05309 [Oryza sativa Japonica Group] gi|215694017|dbj|BAG89216.1| unnamed protein product [Oryza sativa Japonica Group] Length = 552 Score = 132 bits (333), Expect = 2e-29 Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 3/110 (2%) Frame = +1 Query: 1 VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSSYNGCV 180 VGG+ E V ADL+ F+S+G V +EFV+T+GRSFAYVDF SDK+L KLFS+YNGC Sbjct: 20 VGGISEGVAAADLEAMFASVGRVAGVEFVRTNGRSFAYVDFHCPSDKALAKLFSTYNGCK 79 Query: 181 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQD---NIDIPEKPKLLTQDK 321 WKGG+LRLEKAKEHYL RL+REWE++ AQ+ + D+ K + L +K Sbjct: 80 WKGGKLRLEKAKEHYLTRLKREWEQEAAAAQEMPASADVESKKEKLELNK 129