BLASTX nr result

ID: Coptis24_contig00005298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005298
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40568.3| unnamed protein product [Vitis vinifera]              146   3e-33
ref|XP_002265230.1| PREDICTED: uncharacterized protein LOC100260...   146   3e-33
ref|XP_002523322.1| conserved hypothetical protein [Ricinus comm...   142   7e-32
ref|XP_002320873.1| predicted protein [Populus trichocarpa] gi|2...   132   7e-29
ref|XP_003521812.1| PREDICTED: uncharacterized protein LOC100784...   129   6e-28

>emb|CBI40568.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  146 bits (369), Expect = 3e-33
 Identities = 73/110 (66%), Positives = 83/110 (75%)
 Frame = +2

Query: 293 WQRTANRCFVQEDAKRAPKLACCPSSSSTSKPLVDLGPGDAANMPEHASAGFVPLNRYPC 472
           WQR ANRCFVQEDAKRAPKLACCPSSSS+SK   D G  +AA+ P+H   GF+PLNR   
Sbjct: 10  WQRAANRCFVQEDAKRAPKLACCPSSSSSSKQ-ADAGHANAADGPDHPPVGFMPLNR-TS 67

Query: 473 NSNLPPDTKWWLQLQPNFGNQKDFTSEQLNILEMELESLRDAEMKRMSQL 622
            SNLPPDT+WWLQLQPN+G QK  TSEQLN LE E+E L D    + S+L
Sbjct: 68  YSNLPPDTRWWLQLQPNYGYQKGLTSEQLNALEAEVEMLIDGTASKTSEL 117


>ref|XP_002265230.1| PREDICTED: uncharacterized protein LOC100260339 [Vitis vinifera]
          Length = 478

 Score =  146 bits (369), Expect = 3e-33
 Identities = 73/110 (66%), Positives = 83/110 (75%)
 Frame = +2

Query: 293 WQRTANRCFVQEDAKRAPKLACCPSSSSTSKPLVDLGPGDAANMPEHASAGFVPLNRYPC 472
           WQR ANRCFVQEDAKRAPKLACCPSSSS+SK   D G  +AA+ P+H   GF+PLNR   
Sbjct: 10  WQRAANRCFVQEDAKRAPKLACCPSSSSSSKQ-ADAGHANAADGPDHPPVGFMPLNR-TS 67

Query: 473 NSNLPPDTKWWLQLQPNFGNQKDFTSEQLNILEMELESLRDAEMKRMSQL 622
            SNLPPDT+WWLQLQPN+G QK  TSEQLN LE E+E L D    + S+L
Sbjct: 68  YSNLPPDTRWWLQLQPNYGYQKGLTSEQLNALEAEVEMLIDGTASKTSEL 117


>ref|XP_002523322.1| conserved hypothetical protein [Ricinus communis]
           gi|223537410|gb|EEF39038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 481

 Score =  142 bits (357), Expect = 7e-32
 Identities = 72/115 (62%), Positives = 87/115 (75%)
 Frame = +2

Query: 293 WQRTANRCFVQEDAKRAPKLACCPSSSSTSKPLVDLGPGDAANMPEHASAGFVPLNRYPC 472
           WQRTANRCFVQEDAKRAPKLACC SSSS+SK  VD GP +AA MPE+++ GF+P +R   
Sbjct: 10  WQRTANRCFVQEDAKRAPKLACCQSSSSSSKQ-VDGGPTNAAEMPENSAVGFMPFHRNAS 68

Query: 473 NSNLPPDTKWWLQLQPNFGNQKDFTSEQLNILEMELESLRDAEMKRMSQLTEDLP 637
            S+LPPDT+WWLQLQP++G QK FT EQL+ LE E+E LR   +   S + E  P
Sbjct: 69  YSSLPPDTRWWLQLQPSYGYQKGFTYEQLDKLENEVEILRAEFVNAPSIIDEIRP 123


>ref|XP_002320873.1| predicted protein [Populus trichocarpa] gi|222861646|gb|EEE99188.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  132 bits (331), Expect = 7e-29
 Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 6/101 (5%)
 Frame = +2

Query: 293 WQRTANRCFVQEDAKRAPKLACCPSSSSTSKPLVDLGPGDAANMPEHASAGFVPLNRYPC 472
           WQRTANRCFVQEDAKRAPKLACC SSSS+SK L D GP  AA+MP+ +S GF+PL RYP 
Sbjct: 10  WQRTANRCFVQEDAKRAPKLACCQSSSSSSKQL-DGGPTSAADMPDQSSGGFMPLRRYPS 68

Query: 473 NSNLPPDTKWWLQLQPNFGNQ-----KDFTS-EQLNILEME 577
            S+LPPDT+WWLQLQP++G Q     KDF   +   ++EME
Sbjct: 69  YSSLPPDTRWWLQLQPSYGYQKFLYDKDFQEFKNSKLMEME 109


>ref|XP_003521812.1| PREDICTED: uncharacterized protein LOC100784190 [Glycine max]
          Length = 426

 Score =  129 bits (323), Expect = 6e-28
 Identities = 63/114 (55%), Positives = 79/114 (69%)
 Frame = +2

Query: 293 WQRTANRCFVQEDAKRAPKLACCPSSSSTSKPLVDLGPGDAANMPEHASAGFVPLNRYPC 472
           WQRTANRCFVQEDAKRAPKLACC SS +TSK  VD GP   A+  +H +      NR   
Sbjct: 10  WQRTANRCFVQEDAKRAPKLACCQSSCATSKS-VDAGPASTADESDHTTVNVTHFNRKSS 68

Query: 473 NSNLPPDTKWWLQLQPNFGNQKDFTSEQLNILEMELESLRDAEMKRMSQLTEDL 634
            SNL PD++WWL LQPN+G QK  T EQLN LE E+E+L  +++ + S+  ++L
Sbjct: 69  ISNLSPDSRWWLHLQPNYGYQKGLTYEQLNALEDEVETLLASDLSKNSEEFQEL 122


Top