BLASTX nr result

ID: Coptis24_contig00005289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005289
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vi...   417   e-114
ref|XP_002516567.1| myb, putative [Ricinus communis] gi|22354438...   390   e-106
ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|2...   383   e-104
dbj|BAB70511.1| Myb [Nicotiana tabacum]                               381   e-103
emb|CBI20887.3| unnamed protein product [Vitis vinifera]              380   e-103

>ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vitis vinifera]
          Length = 1051

 Score =  417 bits (1072), Expect = e-114
 Identities = 227/421 (53%), Positives = 272/421 (64%), Gaps = 3/421 (0%)
 Frame = -2

Query: 1254 PPEGGSDGYQNIRPLHGRTSGPTRRSTKGQWTAEEDTLLCRAVQRFKGRNWKKIAECFKD 1075
            P EG SDG+Q +RP HGRTSGPTRRSTKGQWTAEED +LC+AVQR+KG+NWKKIAECFKD
Sbjct: 10   PTEGVSDGFQKMRPPHGRTSGPTRRSTKGQWTAEEDEILCKAVQRYKGKNWKKIAECFKD 69

Query: 1074 RTDVQCLHRWQKVLNPELVKGPWSKEEDDIIVEMVNKYGAKKWSTIAQALPGRIGKQCRE 895
            RTDVQCLHRWQKVLNPELVKGPWSKEED++I+E+VNKYGAKKWSTIAQ LPGRIGKQCRE
Sbjct: 70   RTDVQCLHRWQKVLNPELVKGPWSKEEDEVIIELVNKYGAKKWSTIAQHLPGRIGKQCRE 129

Query: 894  RWHNHLNPAINKDAWTQEEELTLIRAHQLYGNKWAELTKFLPGRTDNSIKNHWNSSVKKK 715
            RWHNHLNPAINK+AWTQEEEL L+RAHQ+YGNKWAELTKFLPGRTDN+IKNHWNSSVKKK
Sbjct: 130  RWHNHLNPAINKEAWTQEEELALVRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKK 189

Query: 714  LDSYLASGLLTQFHAPPNVINQNICIXXXXXXXXXXXXXXSLQDGXXXXXXXXXXXXXXX 535
            LDSY+ASGLL QF   P V ++N  I              S   G               
Sbjct: 190  LDSYIASGLLAQFQGLPLVGHRNQSIHSSSSRMQQSSGDDSGAKGGIEAEEISECSQGST 249

Query: 534  XXXXXIDYAIPNVVPVHAREEYDRSEDI-QRKGXXXXXXXXXXXXXSALDDVTRVVPEAQ 358
                    +  +   +H REE+  +E+  Q K              +++++VT  +PE  
Sbjct: 250  AVGCSQSVSEMSNSGLHTREEFQMTEESGQGKEQSSSPISCSKQYYASIEEVTLSIPEIP 309

Query: 357  CGTANSFHSCENHPSCEAGSSGNDGSSLCRSHDLPDSSAIELVHETSDLLETSKHRRVGT 178
            C      +  E +   +A  SG+       S++ P  S+ EL   +S L   S H   G 
Sbjct: 310  CELDCPSNYLEPNFPHDARISGSVERQF-NSNEQPAISSFELGQASSGL---SSHFNGGN 365

Query: 177  DGNQEPKSVPFQSSVGFNA--PMGNSTMQPQNQELLCITEGDCRAVILSEGGTNVCFSLG 4
            + N++  S+P Q+SVG NA   MGN  +     E L I+EGDC      E GT+  FS  
Sbjct: 366  E-NRDTVSIPLQTSVGLNASSSMGNMGVDSDIPEHLLISEGDCCGFRFQEAGTDEYFSSE 424

Query: 3    N 1
            N
Sbjct: 425  N 425


>ref|XP_002516567.1| myb, putative [Ricinus communis] gi|223544387|gb|EEF45908.1| myb,
            putative [Ricinus communis]
          Length = 1046

 Score =  390 bits (1003), Expect = e-106
 Identities = 221/424 (52%), Positives = 266/424 (62%), Gaps = 8/424 (1%)
 Frame = -2

Query: 1257 APPEGGSDGY--QNIRPLHGRTSGPTRRSTKGQWTAEEDTLLCRAVQRFKGRNWKKIAEC 1084
            AP +G  +G   Q IRPLHGRTSGP RRSTKGQWTAEED +L +AVQRFKG+NWKKIAEC
Sbjct: 9    APSDGHGEGVGIQRIRPLHGRTSGPARRSTKGQWTAEEDEILRKAVQRFKGKNWKKIAEC 68

Query: 1083 FKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDIIVEMVNKYGAKKWSTIAQALPGRIGKQ 904
            FKDRTDVQCLHRWQKVLNPELVKGPWSKEED+ I+E+VNKYG KKWSTIAQ LPGRIGKQ
Sbjct: 69   FKDRTDVQCLHRWQKVLNPELVKGPWSKEEDETIIELVNKYGPKKWSTIAQHLPGRIGKQ 128

Query: 903  CRERWHNHLNPAINKDAWTQEEELTLIRAHQLYGNKWAELTKFLPGRTDNSIKNHWNSSV 724
            CRERWHNHLNP+INK+AWTQ+EEL LIRAHQ+YGN+WAELTKFLPGRTDNSIKNHWNSSV
Sbjct: 129  CRERWHNHLNPSINKEAWTQQEELALIRAHQIYGNRWAELTKFLPGRTDNSIKNHWNSSV 188

Query: 723  KKKLDSYLASGLLTQFHAPPNVINQNICIXXXXXXXXXXXXXXSLQDGXXXXXXXXXXXX 544
            KKKLDSYLASGLL QF   P V +Q   +                + G            
Sbjct: 189  KKKLDSYLASGLLEQFQGLPLVPHQP--MPSSSSRVQSSGDDSGFKCGIDAEEISECSQE 246

Query: 543  XXXXXXXXIDYAIPNVVPVHAREEYDRSEDI-QRKGXXXXXXXXXXXXXSALDDVTRVVP 367
                        + N V + +REE+  +E+   +K              +++ DVT  VP
Sbjct: 247  SIVAGCSQSMSGLGNAV-LPSREEFHLTEESGLKKERSSSPASCSEQYFTSVGDVTFSVP 305

Query: 366  EAQCGTA---NSFHSCENHPSCEAGSSGNDGSSLCRSHDLPDSSAIELVHETSDLLETSK 196
            E  C  A   N  H  +N  S     + ND        +LP  S++EL H++S L     
Sbjct: 306  EIPCEMACSSNFLH--QNFSSNTITPASNDYQ--YNIQELPSVSSLELGHDSSGL----P 357

Query: 195  HRRVGTDGNQEPKSVPFQSSVGFNAP--MGNSTMQPQNQELLCITEGDCRAVILSEGGTN 22
               +  + + +  +VPFQSS+GF+ P  MGN T      + + IT+ +C   + SE    
Sbjct: 358  THCMTPNESHDMVNVPFQSSMGFSVPAAMGNITENSAKPDHMFITDDECCQFLFSEAMNG 417

Query: 21   VCFS 10
              FS
Sbjct: 418  AIFS 421


>ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|222855533|gb|EEE93080.1|
            predicted protein [Populus trichocarpa]
          Length = 1027

 Score =  383 bits (984), Expect = e-104
 Identities = 214/428 (50%), Positives = 265/428 (61%), Gaps = 6/428 (1%)
 Frame = -2

Query: 1275 AEVLAIAPPEG-GSDGYQNIRPLHGRTSGPTRRSTKGQWTAEEDTLLCRAVQRFKGRNWK 1099
            ++ L  AP +G  S+G    + LHGRTSGP RRSTKGQWTAEED +L +AVQRFKG+NWK
Sbjct: 4    SDSLISAPVDGLVSEGVPRPKLLHGRTSGPARRSTKGQWTAEEDEILRKAVQRFKGKNWK 63

Query: 1098 KIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDIIVEMVNKYGAKKWSTIAQALPG 919
            KIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEED+II+E+VNKYG KKWSTIAQ LPG
Sbjct: 64   KIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIELVNKYGPKKWSTIAQHLPG 123

Query: 918  RIGKQCRERWHNHLNPAINKDAWTQEEELTLIRAHQLYGNKWAELTKFLPGRTDNSIKNH 739
            RIGKQCRERWHNHLNP+INK+AWTQ+EEL LIRAHQ+YGN+WAELTKFLPGRTDN+IKNH
Sbjct: 124  RIGKQCRERWHNHLNPSINKEAWTQQEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNH 183

Query: 738  WNSSVKKKLDSYLASGLLTQFHAPPNVINQNICIXXXXXXXXXXXXXXSLQDGXXXXXXX 559
            WNSSVKKKLDSYLASGLL QF A P V +Q + +              + + G       
Sbjct: 184  WNSSVKKKLDSYLASGLLEQFQAFPLVGHQTLPMSSSSSRLHCSGDDNAQRGGAEAEDIS 243

Query: 558  XXXXXXXXXXXXXIDYAIPNVVPVHAREEYDRSEDIQRKGXXXXXXXXXXXXXSALDDVT 379
                             + N V  H REE+  +E+                   A     
Sbjct: 244  ECSQESTIGGCSQSASDLGNAV-FHTREEFQLAEE--------SGLRKEQSSSPASCSEQ 294

Query: 378  RVVPEAQC---GTANSFHSCENHPSCEAGSSGNDGSSLCRSHDLPDSSAIELVHETSDLL 208
              +PE  C   G++N      +H +  + SS           +LP+ S++EL  E+S L 
Sbjct: 295  YYIPEMPCELGGSSNFLQQNFSHNTLTSVSSDYQ----FELQELPNVSSLELRQESSGL- 349

Query: 207  ETSKHRRVGTDGNQEPKSVPFQSSVGFNAP--MGNSTMQPQNQELLCITEGDCRAVILSE 34
                   +  + + E  +VPFQ+S+G +AP  MGN T      + + I++ +C  ++ SE
Sbjct: 350  ---PTHCITANESHELVNVPFQTSIGLSAPASMGNITASSVQSDQIFISDDECCRILFSE 406

Query: 33   GGTNVCFS 10
                  FS
Sbjct: 407  AANGGIFS 414


>dbj|BAB70511.1| Myb [Nicotiana tabacum]
          Length = 1042

 Score =  381 bits (978), Expect = e-103
 Identities = 219/423 (51%), Positives = 254/423 (60%), Gaps = 12/423 (2%)
 Frame = -2

Query: 1254 PPEGGSDGYQNIRPLHGRTSGPTRRSTKGQWTAEEDTLLCRAVQRFKGRNWKKIAECFKD 1075
            P +G S   Q +RPLHGRTSGPTRRSTKGQWT EED +L +AVQRFKG+NWKKIAECFKD
Sbjct: 9    PSDGTSSSLQRVRPLHGRTSGPTRRSTKGQWTTEEDEILRKAVQRFKGKNWKKIAECFKD 68

Query: 1074 RTDVQCLHRWQKVLNPELVKGPWSKEEDDIIVEMVNKYGAKKWSTIAQALPGRIGKQCRE 895
            RTDVQCLHRWQKVLNPELVKGPWSKEED++IVE+V KYG KKWSTIAQ LPGRIGKQCRE
Sbjct: 69   RTDVQCLHRWQKVLNPELVKGPWSKEEDEVIVELVKKYGPKKWSTIAQHLPGRIGKQCRE 128

Query: 894  RWHNHLNPAINKDAWTQEEELTLIRAHQLYGNKWAELTKFLPGRTDNSIKNHWNSSVKKK 715
            RWHNHLNP INK+AWTQEEELTLIRAHQ+YGNKWAELTK+LPGRTDN+IKNHWNSSVKKK
Sbjct: 129  RWHNHLNPGINKEAWTQEEELTLIRAHQIYGNKWAELTKYLPGRTDNAIKNHWNSSVKKK 188

Query: 714  LDSYLASGLLTQFHAPPNVINQNICIXXXXXXXXXXXXXXSLQDGXXXXXXXXXXXXXXX 535
            LDSYLASGLL QF A PNV  QN  I                ++G               
Sbjct: 189  LDSYLASGLLAQFPALPNVNRQNQSIPSSAKLQQSSEDDSVRKEGTEMEEASECSQGSNL 248

Query: 534  XXXXXIDYAIPNVVPVHAREEYDRSEDIQ-RKGXXXXXXXXXXXXXSALDDVTRVVPEAQ 358
                     + N   VH REE    ED   RK               A +D+T  + E  
Sbjct: 249  AGCSQSTSDMGNKF-VHTREEGKLLEDSNYRKDPSSSSAPCSEYYTPAFEDITFSMAEVP 307

Query: 357  CGTANSFHSCENHPSCEAGSSGNDGSSLCRSHDLPDSSAIELVHETSDLLETSKHRRVGT 178
                 S           A S G +        D+P+ S +EL+ ++S L      + +  
Sbjct: 308  SELDESKLLEHTFSHDWAASIGKEWQ--FNPDDIPNISPLELMQDSSGLF----MQCLTG 361

Query: 177  DGNQEPKSVPFQSSVGFNAPMGNSTMQ--PQNQELLCITEGDCRAV---------ILSEG 31
            +GN +  + P Q++V F      S +    +  E+    EG CR V         I SE 
Sbjct: 362  NGNHDMVTFPQQNAVKFETTNVGSMVVGFDKPNEMFTSVEG-CRMVYPEAGIPQYIPSEA 420

Query: 30   GTN 22
            GTN
Sbjct: 421  GTN 423


>emb|CBI20887.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  380 bits (976), Expect = e-103
 Identities = 171/197 (86%), Positives = 186/197 (94%)
 Frame = -2

Query: 1254 PPEGGSDGYQNIRPLHGRTSGPTRRSTKGQWTAEEDTLLCRAVQRFKGRNWKKIAECFKD 1075
            P EG SDG+Q +RP HGRTSGPTRRSTKGQWTAEED +LC+AVQR+KG+NWKKIAECFKD
Sbjct: 10   PTEGVSDGFQKMRPPHGRTSGPTRRSTKGQWTAEEDEILCKAVQRYKGKNWKKIAECFKD 69

Query: 1074 RTDVQCLHRWQKVLNPELVKGPWSKEEDDIIVEMVNKYGAKKWSTIAQALPGRIGKQCRE 895
            RTDVQCLHRWQKVLNPELVKGPWSKEED++I+E+VNKYGAKKWSTIAQ LPGRIGKQCRE
Sbjct: 70   RTDVQCLHRWQKVLNPELVKGPWSKEEDEVIIELVNKYGAKKWSTIAQHLPGRIGKQCRE 129

Query: 894  RWHNHLNPAINKDAWTQEEELTLIRAHQLYGNKWAELTKFLPGRTDNSIKNHWNSSVKKK 715
            RWHNHLNPAINK+AWTQEEEL L+RAHQ+YGNKWAELTKFLPGRTDN+IKNHWNSSVKKK
Sbjct: 130  RWHNHLNPAINKEAWTQEEELALVRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKK 189

Query: 714  LDSYLASGLLTQFHAPP 664
            LDSY+ASGLL QF   P
Sbjct: 190  LDSYIASGLLAQFQGLP 206


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