BLASTX nr result

ID: Coptis24_contig00005287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005287
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19184.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259...   129   2e-28
ref|XP_003630473.1| Phi-1 protein [Medicago truncatula] gi|35552...   125   3e-27
dbj|BAA33810.1| phi-1 [Nicotiana tabacum]                             125   3e-27
ref|XP_003522788.1| PREDICTED: uncharacterized protein LOC100811...   125   4e-27

>emb|CBI19184.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/80 (76%), Positives = 65/80 (81%)
 Frame = +3

Query: 3   AGTATNPFGNGYYQGPADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXX 182
           AGTATNPFGNGY+QGPA+APLEAASACPG+YGK AYPGYAGDLLVD              
Sbjct: 88  AGTATNPFGNGYFQGPAEAPLEAASACPGVYGKGAYPGYAGDLLVDSVTGASYNAHGANG 147

Query: 183 RKYLLPALFDPSTSSCSTLV 242
           RKYLLPAL+DPSTSSCSTLV
Sbjct: 148 RKYLLPALYDPSTSSCSTLV 167


>ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259041 [Vitis vinifera]
           gi|147765766|emb|CAN68978.1| hypothetical protein
           VITISV_040774 [Vitis vinifera]
          Length = 319

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/80 (76%), Positives = 65/80 (81%)
 Frame = +3

Query: 3   AGTATNPFGNGYYQGPADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXX 182
           AGTATNPFGNGY+QGPA+APLEAASACPG+YGK AYPGYAGDLLVD              
Sbjct: 240 AGTATNPFGNGYFQGPAEAPLEAASACPGVYGKGAYPGYAGDLLVDSVTGASYNAHGANG 299

Query: 183 RKYLLPALFDPSTSSCSTLV 242
           RKYLLPAL+DPSTSSCSTLV
Sbjct: 300 RKYLLPALYDPSTSSCSTLV 319


>ref|XP_003630473.1| Phi-1 protein [Medicago truncatula] gi|355524495|gb|AET04949.1|
           Phi-1 protein [Medicago truncatula]
          Length = 317

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/80 (73%), Positives = 64/80 (80%)
 Frame = +3

Query: 3   AGTATNPFGNGYYQGPADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXX 182
           AGTATNPFGNGY+QGP++APLEAASACPG+YGK AYPGYAGDLLVD              
Sbjct: 238 AGTATNPFGNGYFQGPSEAPLEAASACPGVYGKGAYPGYAGDLLVDSTTGASFNAHGDNG 297

Query: 183 RKYLLPALFDPSTSSCSTLV 242
           RKYLLPAL+DPST SCSTLV
Sbjct: 298 RKYLLPALYDPSTLSCSTLV 317


>dbj|BAA33810.1| phi-1 [Nicotiana tabacum]
          Length = 313

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/80 (75%), Positives = 63/80 (78%)
 Frame = +3

Query: 3   AGTATNPFGNGYYQGPADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXX 182
           AGTATNPFGNGYYQG ADAPLEAASACPG+Y K AYPGYAGDLLVD              
Sbjct: 234 AGTATNPFGNGYYQGEADAPLEAASACPGVYAKGAYPGYAGDLLVDKTTGASYNAHGTNG 293

Query: 183 RKYLLPALFDPSTSSCSTLV 242
           RKYLLPAL+DPSTS+CSTLV
Sbjct: 294 RKYLLPALYDPSTSTCSTLV 313


>ref|XP_003522788.1| PREDICTED: uncharacterized protein LOC100811449 [Glycine max]
          Length = 317

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/80 (73%), Positives = 64/80 (80%)
 Frame = +3

Query: 3   AGTATNPFGNGYYQGPADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXX 182
           AGTATNPFGNGY+QGPA+APLEAASACPG+YGK AYPGYAGDLLVD              
Sbjct: 238 AGTATNPFGNGYFQGPAEAPLEAASACPGVYGKGAYPGYAGDLLVDSTTGASYNVKGANG 297

Query: 183 RKYLLPALFDPSTSSCSTLV 242
           RKYL+PAL+DPSTSSCST V
Sbjct: 298 RKYLVPALYDPSTSSCSTPV 317


Top