BLASTX nr result
ID: Coptis24_contig00005280
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005280 (824 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228... 109 8e-22 ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211... 109 8e-22 ref|XP_002282257.1| PREDICTED: uncharacterized protein LOC100243... 103 5e-20 ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago tru... 101 2e-19 ref|XP_002313518.1| predicted protein [Populus trichocarpa] gi|2... 98 2e-18 >ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228076 [Cucumis sativus] Length = 222 Score = 109 bits (272), Expect = 8e-22 Identities = 52/89 (58%), Positives = 68/89 (76%) Frame = +2 Query: 242 FPANRINRIIRSEGADFRITQESIFLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLIS 421 FP +RI +I+R E +D RI QE++FL+NKA+E FL C+D YA AQDR+K + YK +S Sbjct: 126 FPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLS 185 Query: 422 FAVSKGKKYDFLSDFVPDKIRAEDALLER 508 VSK K+YDFLSDFVP+K++ EDAL ER Sbjct: 186 SVVSKRKRYDFLSDFVPEKLKFEDALKER 214 >ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211039 [Cucumis sativus] Length = 221 Score = 109 bits (272), Expect = 8e-22 Identities = 52/89 (58%), Positives = 68/89 (76%) Frame = +2 Query: 242 FPANRINRIIRSEGADFRITQESIFLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLIS 421 FP +RI +I+R E +D RI QE++FL+NKA+E FL C+D YA AQDR+K + YK +S Sbjct: 125 FPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLS 184 Query: 422 FAVSKGKKYDFLSDFVPDKIRAEDALLER 508 VSK K+YDFLSDFVP+K++ EDAL ER Sbjct: 185 SVVSKRKRYDFLSDFVPEKLKFEDALKER 213 >ref|XP_002282257.1| PREDICTED: uncharacterized protein LOC100243337 [Vitis vinifera] gi|297746240|emb|CBI16296.3| unnamed protein product [Vitis vinifera] Length = 425 Score = 103 bits (257), Expect = 5e-20 Identities = 51/93 (54%), Positives = 69/93 (74%) Frame = +2 Query: 242 FPANRINRIIRSEGADFRITQESIFLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLIS 421 FP +RI RI+RS+ D RI+QE++FLINKA+E+FL+ D YA +DR+ V YK I+ Sbjct: 333 FPMSRIERIVRSDCDDVRISQEALFLINKASEEFLQQFVNDAYACSVKDRKNYVSYKHIA 392 Query: 422 FAVSKGKKYDFLSDFVPDKIRAEDALLERLTQT 520 AVSK K++DFLSDFVP+++ AE AL ER +T Sbjct: 393 SAVSKCKRFDFLSDFVPERVSAEKALAERSAKT 425 >ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago truncatula] gi|355507460|gb|AES88602.1| DNA polymerase epsilon subunit [Medicago truncatula] gi|388523247|gb|AFK49676.1| nuclear transcription factor Y subunit C7 [Medicago truncatula] Length = 179 Score = 101 bits (252), Expect = 2e-19 Identities = 49/88 (55%), Positives = 64/88 (72%) Frame = +2 Query: 242 FPANRINRIIRSEGADFRITQESIFLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLIS 421 FP NRI +++ E +D R++QE+I IN A E+FLE L ED Y AQDR+K + Y +S Sbjct: 83 FPMNRIRTMLKGEISDLRVSQEAILAINNAAEKFLEQLAEDAYGCCAQDRKKSLSYNHLS 142 Query: 422 FAVSKGKKYDFLSDFVPDKIRAEDALLE 505 VSK K+YDFLSDFVP+K++AEDAL E Sbjct: 143 RVVSKQKRYDFLSDFVPEKVKAEDALRE 170 >ref|XP_002313518.1| predicted protein [Populus trichocarpa] gi|222849926|gb|EEE87473.1| predicted protein [Populus trichocarpa] Length = 212 Score = 98.2 bits (243), Expect = 2e-18 Identities = 46/92 (50%), Positives = 68/92 (73%) Frame = +2 Query: 233 SCCFPANRINRIIRSEGADFRITQESIFLINKATEQFLEVLCEDVYAKIAQDRRKVVDYK 412 +C FP RI RII+SE ++ ++Q+ +FL+NKATE+FLE ++ Y QDR+K + YK Sbjct: 113 ACRFPMARIKRIIKSEDSESLLSQDVVFLVNKATEKFLEQFSDEAYDYSVQDRKKSLAYK 172 Query: 413 LISFAVSKGKKYDFLSDFVPDKIRAEDALLER 508 +S VSK +++DFLSDFVP+K+ A+DAL +R Sbjct: 173 HLSTVVSKRRRFDFLSDFVPEKLNAKDALADR 204