BLASTX nr result

ID: Coptis24_contig00005279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005279
         (2020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271465.2| PREDICTED: uncharacterized protein LOC100258...   370   e-100
ref|XP_002519172.1| conserved hypothetical protein [Ricinus comm...   357   7e-96
ref|XP_002269281.1| PREDICTED: uncharacterized protein LOC100243...   343   1e-91
ref|XP_002314324.1| predicted protein [Populus trichocarpa] gi|2...   343   1e-91
emb|CBI36906.3| unnamed protein product [Vitis vinifera]              333   1e-88

>ref|XP_002271465.2| PREDICTED: uncharacterized protein LOC100258588 [Vitis vinifera]
          Length = 412

 Score =  370 bits (951), Expect = e-100
 Identities = 222/505 (43%), Positives = 274/505 (54%), Gaps = 19/505 (3%)
 Frame = +1

Query: 19   MSSSSGFNFARSHSGDRFYNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSV 198
            MS   G + +RS +G RFY+PP                                      
Sbjct: 1    MSGQGGVSISRSRNGHRFYDPPAVRRNQQQQQQQQQQQQQQQQHQHQQQQQQQQMVHRQQ 60

Query: 199  KQEE-------------EIDSSSSS------PVGTTTNLDRFLESVTPLVTAQYFSKTSM 321
             Q+              E+D  SS+       +G +TNLDRFLE  TP+V AQ+F KTSM
Sbjct: 61   VQKPLKHKAAAEPESRTELDDCSSTCSVSHQGLGDSTNLDRFLEYTTPVVPAQHFPKTSM 120

Query: 322  KEWRSGGDGEFHPYFNLEDLWESYKEWSAYGAGVPVMLNETDCVIQYYVPYLSGIQLYVD 501
            + WR+    EFHPYF L DLWES+KEWSAYGAGVP++LN ++ V+QYYVPYLSGIQLY+D
Sbjct: 121  RGWRNH-QTEFHPYFILGDLWESFKEWSAYGAGVPLLLNGSESVVQYYVPYLSGIQLYID 179

Query: 502  PSKPPLRVRRAGEDSDAESPRETSSEGSSVCDPEGQLDHGLEAMWNKQTQXXXXXXXXXX 681
            PSKP  R+RR GE+SDAES RETSS+GS+        D+G  A  N Q            
Sbjct: 180  PSKPSPRLRRPGEESDAESSRETSSDGSA--------DYGKLADVNTQ------------ 219

Query: 682  XXXXXXXXXXXXXXXXXXXXELNRISVNDKVVTGSSSDDGEVCNPPGLLIFQYLERDPPY 861
                                 +NR+S+ +K   GS S +GEV NPPGLL+F+YLE+D PY
Sbjct: 220  --------------------NMNRLSLRNKPFMGSPSGEGEVSNPPGLLLFEYLEQDSPY 259

Query: 862  SREPLADKIAFLSSRFHELKTYKSCDLLPASWISVAW*LSVFGLFIIYNIPXXXXXXXXX 1041
             REPLADKI+ L+S+F EL+TY+SCDLLP+SW+SVAW                       
Sbjct: 260  GREPLADKISVLASKFPELRTYRSCDLLPSSWVSVAW----------------------- 296

Query: 1042 XXXXXXXXELWYRYPIYRIPTGPTLRDLDACFLTFHSLSTPLQXXXXXXXXXXXXXXXXX 1221
                         YPIYRIP GPTL++LDACFLTFHSLSTP Q                 
Sbjct: 297  -------------YPIYRIPMGPTLQNLDACFLTFHSLSTPFQSANTDWLDFRG------ 337

Query: 1222 XXXXXGNCQPQVCSSFTNTNGAVDASVKLPLPVFGLASYKFKGSVWTPNGLDERQQASSL 1401
                         SS    +GA     KL L + GLA YKFK SVW  NG++E  +A+SL
Sbjct: 338  -------------SSVQEVHGA-GMPFKLSLSILGLAFYKFKVSVWNHNGVNECPKANSL 383

Query: 1402 LQAAENWLRLLQVDHPDYRFFVSHN 1476
            L+AA+NWLR LQV+HPDY+FFVSHN
Sbjct: 384  LRAADNWLRSLQVNHPDYQFFVSHN 408


>ref|XP_002519172.1| conserved hypothetical protein [Ricinus communis]
            gi|223541487|gb|EEF43036.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 416

 Score =  357 bits (916), Expect = 7e-96
 Identities = 198/412 (48%), Positives = 246/412 (59%)
 Frame = +1

Query: 241  GTTTNLDRFLESVTPLVTAQYFSKTSMKEWRSGGDGEFHPYFNLEDLWESYKEWSAYGAG 420
            G +TNLDRFLE  TP+V AQY  KTS++ WR+  + E  PYF L DLWES+KEWSAYGAG
Sbjct: 83   GNSTNLDRFLEYTTPVVPAQYLPKTSVRGWRNH-ETEHQPYFVLGDLWESFKEWSAYGAG 141

Query: 421  VPVMLNETDCVIQYYVPYLSGIQLYVDPSKPPLRVRRAGEDSDAESPRETSSEGSSVCDP 600
            VP++LN ++ V+QYYVPYLSGIQLY+DP++P  R+RR GE+SDAES R++S++GSS    
Sbjct: 142  VPLLLNGSETVMQYYVPYLSGIQLYIDPARPSPRLRRPGEESDAESSRDSSTDGSS---- 197

Query: 601  EGQLDHGLEAMWNKQTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELNRISVNDKVVT 780
            +   + G+  +W  QTQ                               LNR+S+ +K   
Sbjct: 198  DYGAERGVNGVWGPQTQ---------------------NNITDANIQSLNRLSLRNKHSR 236

Query: 781  GSSSDDGEVCNPPGLLIFQYLERDPPYSREPLADKIAFLSSRFHELKTYKSCDLLPASWI 960
            GSSSD+ E+ NPPG L+F+Y+E   P++REPLADKI+ L+  F  LKT++SCDLLP+SWI
Sbjct: 237  GSSSDEYEISNPPGRLVFEYMEHASPFTREPLADKISALTCNFPGLKTFRSCDLLPSSWI 296

Query: 961  SVAW*LSVFGLFIIYNIPXXXXXXXXXXXXXXXXXELWYRYPIYRIPTGPTLRDLDACFL 1140
            SVAW                                    YPIYRIP GPTL++LDACFL
Sbjct: 297  SVAW------------------------------------YPIYRIPMGPTLQNLDACFL 320

Query: 1141 TFHSLSTPLQXXXXXXXXXXXXXXXXXXXXXXGNCQPQVCSSFTNTNGAVDASVKLPLPV 1320
            TFHSLSTP Q                      G+   +V           D  VKLPL  
Sbjct: 321  TFHSLSTPFQ------------SLNTDWLHFNGSSGREV--------SCADMPVKLPLAT 360

Query: 1321 FGLASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLLQVDHPDYRFFVSHN 1476
            FGLASYKFK S W PNG  E Q+ +SLL+AA+NWLRLLQV HPDY FF SHN
Sbjct: 361  FGLASYKFKVSFWNPNGAYECQKVNSLLRAADNWLRLLQVYHPDYMFFASHN 412


>ref|XP_002269281.1| PREDICTED: uncharacterized protein LOC100243435 [Vitis vinifera]
          Length = 415

 Score =  343 bits (880), Expect = 1e-91
 Identities = 205/494 (41%), Positives = 262/494 (53%), Gaps = 8/494 (1%)
 Frame = +1

Query: 19   MSSSSGFNFARSHSGDRFYNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSV 198
            MS S GF  +R+ SGDRFYN P                                    + 
Sbjct: 1    MSGSGGFAVSRTPSGDRFYNSPAMRRHQQLLLQQQQQVEQRRHQQQKQLRSEPAAEAEAR 60

Query: 199  KQEEEIDSSSSS--------PVGTTTNLDRFLESVTPLVTAQYFSKTSMKEWRSGGDGEF 354
               ++   S  S        P    TN+DR +ESVTP+V AQY S+ S++ WR+  + + 
Sbjct: 61   TDSDDSTLSKPSVCSASPPRPAANMTNIDRLVESVTPVVPAQYTSEASIRGWRTR-EIDH 119

Query: 355  HPYFNLEDLWESYKEWSAYGAGVPVMLNETDCVIQYYVPYLSGIQLYVDPSKPPLRVRRA 534
            +P+F L DLWES+KEWS YG GVP++LN +D V QYYVP+LSGIQLY+DP KP   +RR 
Sbjct: 120  NPFFFLGDLWESFKEWSVYGVGVPLLLNGSDSVKQYYVPFLSGIQLYIDPRKPLSWLRRP 179

Query: 535  GEDSDAESPRETSSEGSSVCDPEGQLDHGLEAMWNKQTQXXXXXXXXXXXXXXXXXXXXX 714
            GE+SDAES RETSS GSS C+ E +     +  W++                        
Sbjct: 180  GEESDAESSRETSSAGSSDCEAERRAKGVADGAWSQHN---------------------- 217

Query: 715  XXXXXXXXXELNRISVNDKVVTGSSSDDGEVCNPPGLLIFQYLERDPPYSREPLADKIAF 894
                      ++R+S+ +K    SSSD+ EVCN PGL +F+YLE++ P+ R+PLADKI+ 
Sbjct: 218  --PMNLNSQRMSRLSLREKSHMSSSSDEAEVCNSPGLRVFEYLEQEQPHIRKPLADKISV 275

Query: 895  LSSRFHELKTYKSCDLLPASWISVAW*LSVFGLFIIYNIPXXXXXXXXXXXXXXXXXELW 1074
            L+++F E+  Y+SCDLLPASW+SVAW                                  
Sbjct: 276  LAAQFPEIGMYRSCDLLPASWMSVAW---------------------------------- 301

Query: 1075 YRYPIYRIPTGPTLRDLDACFLTFHSLSTPLQXXXXXXXXXXXXXXXXXXXXXXGNCQPQ 1254
              YPIYRIP G TLRDLDA FLTFHSLST                            Q Q
Sbjct: 302  --YPIYRIPMGQTLRDLDASFLTFHSLST----------------------HSRSKGQTQ 337

Query: 1255 VCSSFTNTNGAVDASVKLPLPVFGLASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLL 1434
            +  S       VD+  K+ LPVFGLASYK KGS+ TP+G +E QQASSLLQ A NWL+ L
Sbjct: 338  LHGSSGRKVYGVDSLPKISLPVFGLASYKLKGSILTPSGNEEFQQASSLLQDAGNWLKRL 397

Query: 1435 QVDHPDYRFFVSHN 1476
            QVD PDY+FF+SHN
Sbjct: 398  QVDLPDYQFFLSHN 411


>ref|XP_002314324.1| predicted protein [Populus trichocarpa] gi|222863364|gb|EEF00495.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  343 bits (879), Expect = 1e-91
 Identities = 210/506 (41%), Positives = 268/506 (52%), Gaps = 20/506 (3%)
 Frame = +1

Query: 19   MSSSSGFNFARSHSGDRFYNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSV 198
            MS S G + AR+   +RFY  P                                     +
Sbjct: 1    MSGSGGVSIARNRGENRFYVSPGIRKQQQLQQLKQQQQQQKPSISKNST--------VEI 52

Query: 199  KQEEEIDSSSSS--------PVGTTTNLDRFLESVTPLVTAQYFSKTSMKEWRSGGDGEF 354
            ++ +E D   S+        P   +TNLDRFLE  TP+V AQ+  KTS++EWR+  + + 
Sbjct: 53   EKRKESDQCGSNCSVSGRVGPESNSTNLDRFLEYTTPVVPAQFLPKTSVREWRTC-EVQH 111

Query: 355  HP--YFNLEDLWESYKEWSAYGAGVPVMLNETDCVIQYYVPYLSGIQLYVDPSKPPLRVR 528
            H   YF L DLWES+KEWSAYGAGVP++LN ++ V+QYYVPYLSGIQLY+DPS+P LR+R
Sbjct: 112  HQNFYFVLGDLWESFKEWSAYGAGVPLLLNGSETVVQYYVPYLSGIQLYLDPSQPSLRLR 171

Query: 529  RAGEDSDAESPRETSSEGSSVCDPEGQLDHGLEAMWNKQTQXXXXXXXXXXXXXXXXXXX 708
            R GE+SD ES R+T S+GS+                                        
Sbjct: 172  RPGEESDTESSRDTCSDGSNA--------------------------------------- 192

Query: 709  XXXXXXXXXXXELNRISVNDKVVTGSSSDDGEVCNPPGLLIFQYLERDPPYSREPLAD-- 882
                        LNR+S+ +K   GSSSD+ E+ NPPG LIF+Y+E   P++R+PLAD  
Sbjct: 193  --------NIKSLNRLSLRNKPFRGSSSDECEISNPPGRLIFEYMEYASPFTRQPLADQA 244

Query: 883  -------KIAFLSSRFHELKTYKSCDLLPASWISVAW*LSVFGLFIIYNIPXXXXXXXXX 1041
                   +I  L+S+F ELKT++SCDL P+SWISVAW                       
Sbjct: 245  GSFLASLQILVLASQFPELKTFRSCDLSPSSWISVAW----------------------- 281

Query: 1042 XXXXXXXXELWYRYPIYRIPTGPTLRDLDACFLTFHSLSTPLQXXXXXXXXXXXXXXXXX 1221
                         YPIYRIP GPTL++LDACFLT+HSLST +Q                 
Sbjct: 282  -------------YPIYRIPMGPTLQNLDACFLTYHSLSTSIQSQ--------------- 313

Query: 1222 XXXXXGNCQ-PQVCSSFTNTNGAVDASVKLPLPVFGLASYKFKGSVWTPNGLDERQQASS 1398
                  +C+  Q+  S        D S+KLPLP FGLASYKFK S W PNG+ E Q+ASS
Sbjct: 314  ------SCERMQLHGSTVRELHLSDMSLKLPLPTFGLASYKFKVSFWNPNGVYECQKASS 367

Query: 1399 LLQAAENWLRLLQVDHPDYRFFVSHN 1476
            LL+AA+NWLRLLQV+HPDYRFFVSHN
Sbjct: 368  LLRAADNWLRLLQVNHPDYRFFVSHN 393


>emb|CBI36906.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  333 bits (853), Expect = 1e-88
 Identities = 188/409 (45%), Positives = 240/409 (58%)
 Frame = +1

Query: 250  TNLDRFLESVTPLVTAQYFSKTSMKEWRSGGDGEFHPYFNLEDLWESYKEWSAYGAGVPV 429
            TN+DR +ESVTP+V AQY S+ S++ WR+  + + +P+F L DLWES+KEWS YG GVP+
Sbjct: 2    TNIDRLVESVTPVVPAQYTSEASIRGWRTR-EIDHNPFFFLGDLWESFKEWSVYGVGVPL 60

Query: 430  MLNETDCVIQYYVPYLSGIQLYVDPSKPPLRVRRAGEDSDAESPRETSSEGSSVCDPEGQ 609
            +LN +D V QYYVP+LSGIQLY+DP KP   +RR GE+SDAES RETSS GSS C+ E +
Sbjct: 61   LLNGSDSVKQYYVPFLSGIQLYIDPRKPLSWLRRPGEESDAESSRETSSAGSSDCEAERR 120

Query: 610  LDHGLEAMWNKQTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELNRISVNDKVVTGSS 789
                 +  W++                                  ++R+S+ +K    SS
Sbjct: 121  AKGVADGAWSQHN------------------------PMNLNSQRMSRLSLREKSHMSSS 156

Query: 790  SDDGEVCNPPGLLIFQYLERDPPYSREPLADKIAFLSSRFHELKTYKSCDLLPASWISVA 969
            SD+ EVCN PGL +F+YLE++ P+ R+PLADKI+ L+++F E+  Y+SCDLLPASW+SVA
Sbjct: 157  SDEAEVCNSPGLRVFEYLEQEQPHIRKPLADKISVLAAQFPEIGMYRSCDLLPASWMSVA 216

Query: 970  W*LSVFGLFIIYNIPXXXXXXXXXXXXXXXXXELWYRYPIYRIPTGPTLRDLDACFLTFH 1149
            W                                    YPIYRIP G TLRDLDA FLTFH
Sbjct: 217  W------------------------------------YPIYRIPMGQTLRDLDASFLTFH 240

Query: 1150 SLSTPLQXXXXXXXXXXXXXXXXXXXXXXGNCQPQVCSSFTNTNGAVDASVKLPLPVFGL 1329
            SLST                            Q Q+  S       VD+  K+ LPVFGL
Sbjct: 241  SLST----------------------HSRSKGQTQLHGSSGRKVYGVDSLPKISLPVFGL 278

Query: 1330 ASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLLQVDHPDYRFFVSHN 1476
            ASYK KGS+ TP+G +E QQASSLLQ A NWL+ LQVD PDY+FF+SHN
Sbjct: 279  ASYKLKGSILTPSGNEEFQQASSLLQDAGNWLKRLQVDLPDYQFFLSHN 327


Top