BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005278
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22977.3| unnamed protein product [Vitis vinifera]              350   3e-94
ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like ...   345   8e-93
ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259...   345   1e-92
emb|CBI39539.3| unnamed protein product [Vitis vinifera]              345   1e-92
emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]   343   2e-92

>emb|CBI22977.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  350 bits (897), Expect = 3e-94
 Identities = 175/190 (92%), Positives = 183/190 (96%)
 Frame = +2

Query: 95  AAAMGIDLIAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKI 274
           AAAMGIDL+AGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSKI
Sbjct: 65  AAAMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKI 124

Query: 275 NKPPMSLSRLIRYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGG 454
           NKPPMSLSRLIRYM+GKE KIAVLVGTVTDD RVYEVP LK+TALRFTE ARARIEKAGG
Sbjct: 125 NKPPMSLSRLIRYMQGKEDKIAVLVGTVTDDLRVYEVPTLKVTALRFTERARARIEKAGG 184

Query: 455 ECFTFDQLALKAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKAR 634
           EC TFDQLAL+APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFE+AR
Sbjct: 185 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERAR 244

Query: 635 GRRKSRGFKV 664
           GRR SRGF+V
Sbjct: 245 GRRNSRGFRV 254


>ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
          Length = 187

 Score =  345 bits (885), Expect = 8e-93
 Identities = 172/187 (91%), Positives = 180/187 (96%)
 Frame = +2

Query: 104 MGIDLIAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKINKP 283
           MGIDL+AGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSKINKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKP 60

Query: 284 PMSLSRLIRYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGGECF 463
           PMSLSRLIRYM+GKE KIAVLVGTVTDD RVYEVP LK+TALRFTE ARARIEKAGGEC 
Sbjct: 61  PMSLSRLIRYMQGKEDKIAVLVGTVTDDLRVYEVPTLKVTALRFTERARARIEKAGGECL 120

Query: 464 TFDQLALKAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 643
           TFDQLAL+APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 644 KSRGFKV 664
            SRGF+V
Sbjct: 181 NSRGFRV 187


>ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]
          Length = 429

 Score =  345 bits (884), Expect = 1e-92
 Identities = 170/192 (88%), Positives = 183/192 (95%)
 Frame = +2

Query: 89  LKAAAMGIDLIAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMS 268
           L+   MGIDL+AGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMS
Sbjct: 238 LQLLTMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMS 297

Query: 269 KINKPPMSLSRLIRYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKA 448
           K+NKPP+SLSRL+RYM GKE KIAV+VGTVTDD RVYEVPALK+TALRFTETARARIEKA
Sbjct: 298 KVNKPPLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKA 357

Query: 449 GGECFTFDQLALKAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEK 628
           GGEC TFDQLAL+APLGQNTVLLRGPKN+REAVKHFGKAPGVPHSHTKPYVRSKGRKFE+
Sbjct: 358 GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFER 417

Query: 629 ARGRRKSRGFKV 664
           ARGRR SRGF+V
Sbjct: 418 ARGRRNSRGFRV 429


>emb|CBI39539.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  345 bits (884), Expect = 1e-92
 Identities = 170/192 (88%), Positives = 183/192 (95%)
 Frame = +2

Query: 89  LKAAAMGIDLIAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMS 268
           L+   MGIDL+AGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMS
Sbjct: 58  LQLLTMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMS 117

Query: 269 KINKPPMSLSRLIRYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKA 448
           K+NKPP+SLSRL+RYM GKE KIAV+VGTVTDD RVYEVPALK+TALRFTETARARIEKA
Sbjct: 118 KVNKPPLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKA 177

Query: 449 GGECFTFDQLALKAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEK 628
           GGEC TFDQLAL+APLGQNTVLLRGPKN+REAVKHFGKAPGVPHSHTKPYVRSKGRKFE+
Sbjct: 178 GGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFER 237

Query: 629 ARGRRKSRGFKV 664
           ARGRR SRGF+V
Sbjct: 238 ARGRRNSRGFRV 249


>emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]
          Length = 187

 Score =  343 bits (881), Expect = 2e-92
 Identities = 169/187 (90%), Positives = 181/187 (96%)
 Frame = +2

Query: 104 MGIDLIAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKINKP 283
           MGIDL+AGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSK+NKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 284 PMSLSRLIRYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGGECF 463
           P+SLSRL+RYM GKE KIAV+VGTVTDD RVYEVPALK+TALRFTETARARIEKAGGEC 
Sbjct: 61  PLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 464 TFDQLALKAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 643
           TFDQLAL+APLGQNTVLLRGPKN+REAVKHFGKAPGVPHSHTKPYVRSKGRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 644 KSRGFKV 664
            SRGF+V
Sbjct: 181 NSRGFRV 187