BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005274
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [V...   393   e-107
ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis ...   389   e-106
ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [C...   372   e-100
ref|XP_003624695.1| 50S ribosomal protein L25 [Medicago truncatu...   363   6e-98
gb|AFK35431.1| unknown [Medicago truncatula]                          361   2e-97

>ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
            gi|297735240|emb|CBI17602.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  393 bits (1009), Expect = e-107
 Identities = 201/253 (79%), Positives = 223/253 (88%), Gaps = 2/253 (0%)
 Frame = -1

Query: 1205 RPLLKKAIQLRFFSQAATAAVQE--LEIQPLTYLEGFPKPDPKHDETIIAIPRSISGKNI 1032
            R +L  A+ LR FSQ+A AAV +  LE  PLTYLEGFP+PDPK  E I AIPR+ISGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 1031 SAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRPD 852
            SAKERKVGRVPSI+FEQE G+ GGNKRLISVRTNQI+KLVNHLGRSFFLSRLF+LEV PD
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVGPD 126

Query: 851  FESDDIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKKG 672
            FES+++IEK+RVLPRKLHLHAGTDAVLNVTF+RAPS ALLKVDVPLVFRGEDV PGLKKG
Sbjct: 127  FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 671  AYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCNV 492
            AYLNTI RTVKYLCPADI+PPYIDVDLSELD GQKIV GDL VHPALKLL+SK+E VC +
Sbjct: 187  AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 491  KGARVTTEPKKSK 453
             G RV ++ +KSK
Sbjct: 247  MGTRV-SDQRKSK 258


>ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
            gi|297742259|emb|CBI34408.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  389 bits (999), Expect = e-106
 Identities = 199/253 (78%), Positives = 222/253 (87%), Gaps = 2/253 (0%)
 Frame = -1

Query: 1205 RPLLKKAIQLRFFSQAATAAVQE--LEIQPLTYLEGFPKPDPKHDETIIAIPRSISGKNI 1032
            R +L  A+ LR FSQ+A AAV +  LE  PLTYLEGFP+PDPK  E I AIPR+ISGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 1031 SAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRPD 852
            SAKERKVGRVPSI+FEQE G+ GGNKRLISV+TNQI+KLVNHLGRSFFLSRLF+LEV P 
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLFDLEVGPH 126

Query: 851  FESDDIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKKG 672
            FES+++IEK+RVLPRKLHLHAGTDAVLNVTF+RAPS ALLKVDVPLVFRGEDV PGLKKG
Sbjct: 127  FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 671  AYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCNV 492
            AYLNTI RTVKYLCPADI+PPYIDVDLSELD GQKIV GDL VHPALKLL+SK+E VC +
Sbjct: 187  AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 491  KGARVTTEPKKSK 453
             G RV ++ +KSK
Sbjct: 247  MGTRV-SDQRKSK 258


>ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
            gi|449494761|ref|XP_004159639.1| PREDICTED: 50S ribosomal
            protein L25-like [Cucumis sativus]
          Length = 260

 Score =  372 bits (955), Expect = e-100
 Identities = 191/254 (75%), Positives = 219/254 (86%), Gaps = 4/254 (1%)
 Frame = -1

Query: 1202 PLLKKAIQLRFFSQA---ATAAVQELEIQPL-TYLEGFPKPDPKHDETIIAIPRSISGKN 1035
            P L + + LR +S A   ATA   +   +PL +YLEGFPKPDPK+ ETI+AIPRSISGK+
Sbjct: 8    PTLSRVL-LRRYSAATAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPRSISGKS 66

Query: 1034 ISAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRP 855
            ISAKERK GRVPSI+FEQE G+ GGNKRLISVRTNQI KLV +LGRSFFLSRLF+LEV  
Sbjct: 67   ISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLFDLEVLS 126

Query: 854  DFESDDIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKK 675
            DFES DI+EK+RVLPRK+HLHAGTDA LNVTF+RAPS A+LKVDVPLVFRGEDVCPGL+K
Sbjct: 127  DFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDVCPGLRK 186

Query: 674  GAYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCN 495
            G+YLNTI RTVKYLCPADI+PPYIDVDLSELDVGQK+V GDL VHPALKL++SK+E VC 
Sbjct: 187  GSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSKDEPVCK 246

Query: 494  VKGARVTTEPKKSK 453
            + GARV+ + KKSK
Sbjct: 247  IAGARVSDQQKKSK 260


>ref|XP_003624695.1| 50S ribosomal protein L25 [Medicago truncatula]
            gi|87162737|gb|ABD28532.1| Ribosomal protein L25
            [Medicago truncatula] gi|217072210|gb|ACJ84465.1| unknown
            [Medicago truncatula] gi|355499710|gb|AES80913.1| 50S
            ribosomal protein L25 [Medicago truncatula]
          Length = 266

 Score =  363 bits (931), Expect = 6e-98
 Identities = 187/264 (70%), Positives = 217/264 (82%), Gaps = 11/264 (4%)
 Frame = -1

Query: 1211 IQRPLLKKAIQLRFFSQAATAAVQELE----IQPLTYLEGFPKPDPKHDETIIAIPRSIS 1044
            + R LL+  +  R FS  ATA +   E    +QPLTYL+GFPKP+PK+DETI+AIPR  S
Sbjct: 3    LPRTLLRPFLHRRHFSAIATALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDS 62

Query: 1043 GKNISAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLE 864
            GKNISAKERKVGRVPSI+FEQE G  GGNKRLISVR++QI+KLVNHLGRSFFLSRLF+L+
Sbjct: 63   GKNISAKERKVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQ 122

Query: 863  VRPDFESD------DIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRG 702
            V   F+SD      DIIE +RVLPR +HL AGTDA LNVTF+RAPS A LKVDVP+VFRG
Sbjct: 123  VLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRG 182

Query: 701  EDVCPGLKKGAYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLL 522
            +D+ PGLKKGA LNTI RTVKYLCPADI+PPYIDVDLSELDVGQK++ GDLNVHPALKLL
Sbjct: 183  DDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPALKLL 242

Query: 521  QSKEEAVCNVKGARVT-TEPKKSK 453
              K+EAVC + G RV+ T+PKK+K
Sbjct: 243  HPKDEAVCKIMGQRVSETQPKKTK 266


>gb|AFK35431.1| unknown [Medicago truncatula]
          Length = 266

 Score =  361 bits (927), Expect = 2e-97
 Identities = 186/264 (70%), Positives = 216/264 (81%), Gaps = 11/264 (4%)
 Frame = -1

Query: 1211 IQRPLLKKAIQLRFFSQAATAAVQELE----IQPLTYLEGFPKPDPKHDETIIAIPRSIS 1044
            + R LL+  +  R FS  ATA +   E    +QPLTYL+GFPKP+PK+DETI+AIPR  S
Sbjct: 3    LPRTLLRPFLHRRHFSAIATALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDS 62

Query: 1043 GKNISAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLE 864
            GKNISAKERKVGRVPSI+FEQE G  GGNKRLISVR++QI+KLVNHLGRSFFLSRLF+L+
Sbjct: 63   GKNISAKERKVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQ 122

Query: 863  VRPDFESD------DIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRG 702
            V   F+SD      DIIE +RVLPR +HL AGTDA LNVTF+RAPS A LKVDVP+VFRG
Sbjct: 123  VLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRG 182

Query: 701  EDVCPGLKKGAYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLL 522
            +D+ PGLKKGA LNTI RTVKYLCPADI+PPYIDVDLSELDVGQK++ GDLNVHP LKLL
Sbjct: 183  DDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPTLKLL 242

Query: 521  QSKEEAVCNVKGARVT-TEPKKSK 453
              K+EAVC + G RV+ T+PKK+K
Sbjct: 243  HPKDEAVCKIMGQRVSETQPKKTK 266