BLASTX nr result

ID: Coptis24_contig00005267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005267
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173028.1| PREDICTED: ABC transporter B family member 1...   114   1e-23
ref|XP_002283051.2| PREDICTED: ABC transporter B family member 1...   113   1e-23
ref|XP_003554410.1| PREDICTED: ABC transporter B family member 1...   113   1e-23
ref|XP_003543769.1| PREDICTED: ABC transporter B family member 1...   113   1e-23
emb|CBI22189.3| unnamed protein product [Vitis vinifera]              113   1e-23

>ref|XP_004173028.1| PREDICTED: ABC transporter B family member 19-like, partial
           [Cucumis sativus]
          Length = 848

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/67 (88%), Positives = 62/67 (92%)
 Frame = -2

Query: 423 SFIHYLSTFLAGLVAGFVSA*RLELLSIAVIPGIAFSGGLYAYTLTGLTSKSRESYANAG 244
           +FIHYLSTFLAGLV GFVSA RL LLSIAVIPGIAF+GGLYAYTLTGLTSKSRESYANAG
Sbjct: 163 NFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAG 222

Query: 243 IIAGQKL 223
           IIA Q +
Sbjct: 223 IIAEQAI 229


>ref|XP_002283051.2| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
          Length = 1250

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = -2

Query: 423 SFIHYLSTFLAGLVAGFVSA*RLELLSIAVIPGIAFSGGLYAYTLTGLTSKSRESYANAG 244
           +FIHYLSTFLAGLV GFVSA RL LLS+AVIPGIAF+GGLYAYTLTGLTSKSRESYANAG
Sbjct: 163 NFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAG 222

Query: 243 IIAGQKL 223
           IIA Q +
Sbjct: 223 IIAEQAI 229


>ref|XP_003554410.1| PREDICTED: ABC transporter B family member 19-like [Glycine max]
          Length = 1250

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = -2

Query: 423 SFIHYLSTFLAGLVAGFVSA*RLELLSIAVIPGIAFSGGLYAYTLTGLTSKSRESYANAG 244
           +FIHYLSTFLAGLV GFVSA RL LLS+AVIPGIAF+GGLYAYTLTGLTSKSRESYANAG
Sbjct: 163 NFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAG 222

Query: 243 IIAGQKL 223
           IIA Q +
Sbjct: 223 IIAEQAI 229


>ref|XP_003543769.1| PREDICTED: ABC transporter B family member 19-like [Glycine max]
          Length = 1249

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = -2

Query: 423 SFIHYLSTFLAGLVAGFVSA*RLELLSIAVIPGIAFSGGLYAYTLTGLTSKSRESYANAG 244
           +FIHYLSTFLAGLV GFVSA RL LLS+AVIPGIAF+GGLYAYTLTGLTSKSRESYANAG
Sbjct: 162 NFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAG 221

Query: 243 IIAGQKL 223
           IIA Q +
Sbjct: 222 IIAEQAI 228


>emb|CBI22189.3| unnamed protein product [Vitis vinifera]
          Length = 1088

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = -2

Query: 423 SFIHYLSTFLAGLVAGFVSA*RLELLSIAVIPGIAFSGGLYAYTLTGLTSKSRESYANAG 244
           +FIHYLSTFLAGLV GFVSA RL LLS+AVIPGIAF+GGLYAYTLTGLTSKSRESYANAG
Sbjct: 163 NFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAG 222

Query: 243 IIAGQKL 223
           IIA Q +
Sbjct: 223 IIAEQAI 229


Top