BLASTX nr result
ID: Coptis24_contig00005259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005259
(1137 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|2... 295 1e-77
ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vini... 295 2e-77
emb|CBI20569.3| unnamed protein product [Vitis vinifera] 295 2e-77
ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2... 288 2e-75
ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus c... 273 6e-71
>ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|222865643|gb|EEF02774.1|
predicted protein [Populus trichocarpa]
Length = 542
Score = 295 bits (756), Expect = 1e-77
Identities = 167/345 (48%), Positives = 217/345 (62%), Gaps = 5/345 (1%)
Frame = +1
Query: 118 DDVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQS 297
DD TF TCL ++ + LGEV+D + FL GGA+LNLP+FYLEGVV+FPEATL LRV Q
Sbjct: 52 DDFTFNTCLASLHTYLGEVEDTHHRLAFLDGGAILNLPLFYLEGVVLFPEATLPLRVIQP 111
Query: 298 TFKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTR 477
F ++VERAL QVDAP T+GVV ++D DN +L F++VGTT EI QYRRL D SLNV+TR
Sbjct: 112 NFISAVERALVQVDAPYTVGVVRAYRDSDNRRLRFATVGTTAEIRQYRRLEDGSLNVVTR 171
Query: 478 GQQRFRLWHRWIDVEGAPCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDA 657
GQQRFRL RWIDVEG PC EVQII+ED+PLRTP+DAFG+LA L+N S VLP +
Sbjct: 172 GQQRFRLKRRWIDVEGVPCGEVQIIQEDMPLRTPKDAFGKLAPLSNL-RSHKFSSVLP-S 229
Query: 658 SHSEYACSEDEINSEHISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFV- 834
+ S + +SE SE SFE +L+ E ++H SA+ SC +F+
Sbjct: 230 TFSSVGYGHSDNDSEANSEESFETELSLAERRIHQSALNSCYGYDMMDESMSSDDDKFMS 289
Query: 835 -CELGHKLKGYCTQNFGG---SSGKNCNGRIRNDYSGIHHGYQPVVGRKPEVCERWKAWV 1002
E + + ++ G +GKN + + G + +K E +R W
Sbjct: 290 RSEEMRSRRSHLSETEGSLYLDTGKNLGN------TTLEIGNSSGLVKKGEGSKR--CWK 341
Query: 1003 AAESKLSCRASRSFWPHWVYRMYDSYGLAQRAAVKWKQIIGAPSL 1137
+ R R+FWP+WVY MYDSY LA++AA WKQI+GAPS+
Sbjct: 342 NTDLNQFRRVPRTFWPYWVYSMYDSYCLAEKAADMWKQIVGAPSM 386
>ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vinifera]
Length = 543
Score = 295 bits (754), Expect = 2e-77
Identities = 167/344 (48%), Positives = 216/344 (62%), Gaps = 5/344 (1%)
Frame = +1
Query: 121 DVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQST 300
+ TF TCL ++ + LGEV+D + FL GGAV LP+FYLEG V+FPEATL LRV +S
Sbjct: 49 EFTFDTCLASLHTYLGEVEDTHHRLAFLDGGAVWALPLFYLEGAVLFPEATLPLRVIKSN 108
Query: 301 FKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTRG 480
F A+VE+AL+Q DAP TIGVVHV +DPD+ ++ FS++GTT EI QYRRL D SLNV+TRG
Sbjct: 109 FVAAVEKALHQADAPYTIGVVHVERDPDSGRIRFSTIGTTAEIRQYRRLEDHSLNVVTRG 168
Query: 481 QQRFRLWHRWIDVEGAPCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDAS 660
QQRF L WID +G P EVQII+EDLPLRTPRDAFG+LA L+N + S H + S
Sbjct: 169 QQRFHLRRGWIDDDGVPYGEVQIIQEDLPLRTPRDAFGKLAPLSNLRSFSHPHTSQSNTS 228
Query: 661 HSEYACSEDEIN-SEHISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFVC 837
H++ D+ + SE SE SF+ +L+ E++MH SA+ SC +FVC
Sbjct: 229 HAKRPRYGDKDSASESNSEESFDSELSLAEMRMHRSAIDSCYGYDTIDESTSSDDDKFVC 288
Query: 838 ELGHKLKGYCTQNFGGSSGKNCNGRIRNDYSGIHH----GYQPVVGRKPEVCERWKAWVA 1005
E +L GS +C R + GI + G Q G+ + + +
Sbjct: 289 ESELQLGRSHLNEPIGSMHLDCERRNKKANLGIRNKSISGSQSCKGKGLK-----EGQMV 343
Query: 1006 AESKLSCRASRSFWPHWVYRMYDSYGLAQRAAVKWKQIIGAPSL 1137
+ S R+FWP+WVYRMYDSY LAQRAA WKQI+GAPS+
Sbjct: 344 TKLNQSYGVPRAFWPYWVYRMYDSYHLAQRAAGMWKQIVGAPSM 387
>emb|CBI20569.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 295 bits (754), Expect = 2e-77
Identities = 167/344 (48%), Positives = 216/344 (62%), Gaps = 5/344 (1%)
Frame = +1
Query: 121 DVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQST 300
+ TF TCL ++ + LGEV+D + FL GGAV LP+FYLEG V+FPEATL LRV +S
Sbjct: 54 EFTFDTCLASLHTYLGEVEDTHHRLAFLDGGAVWALPLFYLEGAVLFPEATLPLRVIKSN 113
Query: 301 FKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTRG 480
F A+VE+AL+Q DAP TIGVVHV +DPD+ ++ FS++GTT EI QYRRL D SLNV+TRG
Sbjct: 114 FVAAVEKALHQADAPYTIGVVHVERDPDSGRIRFSTIGTTAEIRQYRRLEDHSLNVVTRG 173
Query: 481 QQRFRLWHRWIDVEGAPCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDAS 660
QQRF L WID +G P EVQII+EDLPLRTPRDAFG+LA L+N + S H + S
Sbjct: 174 QQRFHLRRGWIDDDGVPYGEVQIIQEDLPLRTPRDAFGKLAPLSNLRSFSHPHTSQSNTS 233
Query: 661 HSEYACSEDEIN-SEHISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFVC 837
H++ D+ + SE SE SF+ +L+ E++MH SA+ SC +FVC
Sbjct: 234 HAKRPRYGDKDSASESNSEESFDSELSLAEMRMHRSAIDSCYGYDTIDESTSSDDDKFVC 293
Query: 838 ELGHKLKGYCTQNFGGSSGKNCNGRIRNDYSGIHH----GYQPVVGRKPEVCERWKAWVA 1005
E +L GS +C R + GI + G Q G+ + + +
Sbjct: 294 ESELQLGRSHLNEPIGSMHLDCERRNKKANLGIRNKSISGSQSCKGKGLK-----EGQMV 348
Query: 1006 AESKLSCRASRSFWPHWVYRMYDSYGLAQRAAVKWKQIIGAPSL 1137
+ S R+FWP+WVYRMYDSY LAQRAA WKQI+GAPS+
Sbjct: 349 TKLNQSYGVPRAFWPYWVYRMYDSYHLAQRAAGMWKQIVGAPSM 392
>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
predicted protein [Populus trichocarpa]
Length = 549
Score = 288 bits (737), Expect = 2e-75
Identities = 165/346 (47%), Positives = 214/346 (61%), Gaps = 6/346 (1%)
Frame = +1
Query: 118 DDVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQS 297
DD TF CL ++ + LGEV+D + FL GGAVLNLP+FYLEGVV+FPEATL LRV Q
Sbjct: 40 DDFTFNPCLASLHTYLGEVEDTHHRLAFLDGGAVLNLPLFYLEGVVLFPEATLPLRVVQP 99
Query: 298 TFKASVERALNQVDAPNTIGVVHVHK--DPDNEKLHFSSVGTTVEILQYRRLGDSSLNVL 471
F ++VERAL QVD P +GVV ++ D DN +L F++VGTT EI QYRRL D SLNV+
Sbjct: 100 NFISAVERALVQVDNPFIVGVVRAYRGSDSDNRQLRFATVGTTAEIRQYRRLEDGSLNVV 159
Query: 472 TRGQQRFRLWHRWIDVEGAPCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLP 651
TRGQQRF L HRWIDVEG PC EVQII+ED+PLRTP+DAFG+LA L+N S +VLP
Sbjct: 160 TRGQQRFHLKHRWIDVEGMPCGEVQIIQEDIPLRTPKDAFGKLAPLSNL-RSHRLSRVLP 218
Query: 652 DASHSEYACSEDEINSEHISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQF 831
+ + +SE S+ SFE+ L+ ++ H SA+ SC +F
Sbjct: 219 SLGY-----GHSDNDSEANSDDSFENALSSAGMRTHQSALDSCYGYDVMDESTSSDDDKF 273
Query: 832 VCELG-HKLKGYCTQNFG---GSSGKNCNGRIRNDYSGIHHGYQPVVGRKPEVCERWKAW 999
+ + + + ++ G +GKN D + + G + +K E +R W
Sbjct: 274 LSQTEMRSTRSHLNESKGPLYSDTGKNA------DNTTLEIGNSSDLAKKGEGSKR--CW 325
Query: 1000 VAAESKLSCRASRSFWPHWVYRMYDSYGLAQRAAVKWKQIIGAPSL 1137
+ R R+FWPHWVYRMYDSY LA+RAA WKQI+GAPS+
Sbjct: 326 KNTDLNHFHRVPRAFWPHWVYRMYDSYCLAERAADMWKQIVGAPSM 371
>ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus communis]
gi|223544347|gb|EEF45868.1| ATP-dependent peptidase,
putative [Ricinus communis]
Length = 550
Score = 273 bits (698), Expect = 6e-71
Identities = 155/349 (44%), Positives = 208/349 (59%), Gaps = 10/349 (2%)
Frame = +1
Query: 121 DVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQST 300
+ F TCL + + LGEV+D + FL GGAVL LP+FYLEGVV+FP A L LRV Q
Sbjct: 52 EFAFNTCLAPLHTYLGEVEDTHRRFSFLEGGAVLTLPLFYLEGVVLFPGAILPLRVIQPN 111
Query: 301 FKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTRG 480
F ++VERAL QVDAP+TIGVV ++D DN +L F+++GTT EI QYRRL D SLNV+TRG
Sbjct: 112 FISAVERALTQVDAPHTIGVVRAYRDRDNGRLRFATIGTTAEIRQYRRLEDGSLNVVTRG 171
Query: 481 QQRFRLWHRWIDVEGAPCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDAS 660
QQRFRL RWIDVEG PC +VQII+EDLPLR+P+ AFG++ L + + S V AS
Sbjct: 172 QQRFRLRRRWIDVEGVPCGKVQIIQEDLPLRSPQGAFGKIKPLRTLDSRNVSDAVPSSAS 231
Query: 661 H------SEYACSEDEINSEHISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXX 822
+ S A +D+ +SE SE SFE +L+P E ++H SA+ SC
Sbjct: 232 YTVPSNISSDAHGDDDNDSEANSEESFESELSPAERRIHQSAISSCCSHDMMDDLASSDD 291
Query: 823 XQFVCELGHKLKGYCTQNFGGSSGKNCNGRIRNDYSGIHHGYQPVVGRKPEVCERWK--- 993
+F ++ T++ S N + + ++ V + C + +
Sbjct: 292 GKFDSQI------KVTRSHLADSDSNESLHLNHEREMDKTVLATVYFTPKKQCHKGEGSK 345
Query: 994 -AWVAAESKLSCRASRSFWPHWVYRMYDSYGLAQRAAVKWKQIIGAPSL 1137
W + R +FWP WVYRMYDSY LA+RAA W+QI+GAP++
Sbjct: 346 SCWKNTDLSQFRRVPTAFWPFWVYRMYDSYCLAERAADMWRQIVGAPNV 394