BLASTX nr result

ID: Coptis24_contig00005253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005253
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609841.1| DNA (cytosine-5)-methyltransferase DRM2 [Med...    74   1e-11
ref|XP_002519294.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
gb|EEE62229.1| hypothetical protein OsJ_17016 [Oryza sativa Japo...    74   1e-11
gb|EEC78469.1| hypothetical protein OsI_18342 [Oryza sativa Indi...    74   1e-11
ref|NP_001054563.1| Os05g0133900 [Oryza sativa Japonica Group] g...    74   1e-11

>ref|XP_003609841.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
           gi|355510896|gb|AES92038.1| DNA
           (cytosine-5)-methyltransferase DRM2 [Medicago
           truncatula]
          Length = 1032

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/57 (66%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
 Frame = -3

Query: 170 HTQLVGVDPIERLRLLKYSYQTDTLDYHLSVLK-LFPDGLNVLLLFSGIGGAEVALH 3
           HT+    D  ERL+LLK+S+QTDTL YHLSVLK +FP G+ +L +FSGIGGAEVALH
Sbjct: 566 HTRTDECDLTERLQLLKHSFQTDTLGYHLSVLKPIFPTGVTLLSIFSGIGGAEVALH 622


>ref|XP_002519294.1| conserved hypothetical protein [Ricinus communis]
           gi|223541609|gb|EEF43158.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 678

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 12/78 (15%)
 Frame = -3

Query: 200 IHSSAPWESQHTQLVGVDPI-----------ERLRLLKYSYQTDTLDYHLSVLK-LFPDG 57
           +H   P E +H +L+   P+           ERL  L+YS+Q DTL YHLSVLK +FP+G
Sbjct: 491 LHKVRPIEPEHLELILGYPLNHTQTTEGSLTERLHALRYSFQIDTLGYHLSVLKSMFPEG 550

Query: 56  LNVLLLFSGIGGAEVALH 3
           + VL LFSGIGGAEVALH
Sbjct: 551 ITVLSLFSGIGGAEVALH 568


>gb|EEE62229.1| hypothetical protein OsJ_17016 [Oryza sativa Japonica Group]
          Length = 551

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/58 (60%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = -3

Query: 173 QHTQLVGVDPIERLRLLKYSYQTDTLDYHLSVLK-LFPDGLNVLLLFSGIGGAEVALH 3
           +HT L G++P +R+  ++YS+QTDTL Y LSVLK L+PDGL VL ++SGIGGA +ALH
Sbjct: 373 KHTNLFGLNPQDRIEAMRYSFQTDTLGYLLSVLKDLYPDGLRVLSIYSGIGGAAIALH 430


>gb|EEC78469.1| hypothetical protein OsI_18342 [Oryza sativa Indica Group]
          Length = 693

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/58 (60%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = -3

Query: 173 QHTQLVGVDPIERLRLLKYSYQTDTLDYHLSVLK-LFPDGLNVLLLFSGIGGAEVALH 3
           +HT L G++P +R+  ++YS+QTDTL Y LSVLK L+PDGL VL ++SGIGGA +ALH
Sbjct: 515 KHTNLFGLNPQDRIEAMRYSFQTDTLGYLLSVLKDLYPDGLRVLSIYSGIGGAAIALH 572


>ref|NP_001054563.1| Os05g0133900 [Oryza sativa Japonica Group]
           gi|113578114|dbj|BAF16477.1| Os05g0133900 [Oryza sativa
           Japonica Group]
          Length = 667

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/58 (60%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = -3

Query: 173 QHTQLVGVDPIERLRLLKYSYQTDTLDYHLSVLK-LFPDGLNVLLLFSGIGGAEVALH 3
           +HT L G++P +R+  ++YS+QTDTL Y LSVLK L+PDGL VL ++SGIGGA +ALH
Sbjct: 502 KHTNLFGLNPQDRIEAMRYSFQTDTLGYLLSVLKDLYPDGLRVLSIYSGIGGAAIALH 559


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