BLASTX nr result

ID: Coptis24_contig00005248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005248
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|22352...   198   1e-48
ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_003529112.1| PREDICTED: L-type lectin-domain containing r...   185   1e-44
ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing r...   184   1e-44
ref|XP_003552189.1| PREDICTED: L-type lectin-domain containing r...   184   1e-44

>ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|223525084|gb|EEF27843.1|
           kinase, putative [Ricinus communis]
          Length = 669

 Score =  198 bits (503), Expect = 1e-48
 Identities = 98/158 (62%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   HGTNPETADVVGTLGYLAPEMTRTGKGTTSTDVFAFGAFILEVACGRKPIQQLASDRKII 181
           HGT+P+T  VVGT GYLAPE TRTGK TT TDVF+FGAF+LEVA GR+PI++  +   II
Sbjct: 494 HGTDPQTTHVVGTFGYLAPEHTRTGKATTKTDVFSFGAFLLEVASGRRPIERSTTPEDII 553

Query: 182 LVDWVVSCWSRGAILETTDPSLVSDYITEEMELVLKLGLLCSHKIPAARPSMRQVVQFLD 361
            VDWV SCW RG I+E  DP+L +D+I EE+ELVLKLGLLCSH  P ARPSMRQV+Q L+
Sbjct: 554 SVDWVFSCWIRGEIVEAKDPNLGTDFIAEEVELVLKLGLLCSHAEPEARPSMRQVMQILE 613

Query: 362 KDVPLLELSSFGFNA-GCITCGQEGFEEFVSSSLHSSD 472
           +D+PL ELSS G +A G +    EGF++F  S   S D
Sbjct: 614 RDIPLPELSSLGLSASGLVFARHEGFDDFAMSCPSSMD 651


>ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|222834497|gb|EEE72974.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  187 bits (475), Expect = 2e-45
 Identities = 100/158 (63%), Positives = 117/158 (74%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   HGTNPETADVVGTLGYLAPEMTRTGKGTTSTDVFAFGAFILEVACGRKPIQQLASDRKII 181
           HGT+P+T  VVGTLGYLAPE  RTGK TTSTDVFAF AF+LEVA GR+PIQ       II
Sbjct: 374 HGTDPQTTHVVGTLGYLAPEHARTGKATTSTDVFAFAAFLLEVASGRRPIQPTED---II 430

Query: 182 LVDWVVSCWSRGAILETTDPSLVSDYITEEMELVLKLGLLCSHKIPAARPSMRQVVQFLD 361
           LVDWV   W  G ILE  DP+L ++YI EEMELVLKLGL+CSH  PAARP+MRQVVQFL+
Sbjct: 431 LVDWVFIRWLGGEILEARDPNLGTEYIAEEMELVLKLGLMCSHSEPAARPNMRQVVQFLE 490

Query: 362 KDVPLLELSSFGFNAGCITCG-QEGFEEFVSSSLHSSD 472
            DVPL ++SS   +A  +T   +EGF+EF +S   S D
Sbjct: 491 GDVPLPDISSLCLSASGLTFSHREGFDEFANSYPSSMD 528


>ref|XP_003529112.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IV.1-like [Glycine max]
          Length = 667

 Score =  185 bits (469), Expect = 1e-44
 Identities = 95/158 (60%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   HGTNPETADVVGTLGYLAPEMTRTGKGTTSTDVFAFGAFILEVACGRKPIQQLASDRKII 181
           HGT+P T  VVGTLGYLAPE TRTGK TTS+DVFAFGAF+LEV CGR+PI+Q       I
Sbjct: 492 HGTDPHTTHVVGTLGYLAPEHTRTGKATTSSDVFAFGAFMLEVVCGRRPIEQGRESGSEI 551

Query: 182 LVDWVVSCWSRGAILETTDPSLVSDYITEEMELVLKLGLLCSHKIPAARPSMRQVVQFLD 361
           LVDWV +CW +G ILE  DP+L ++Y  +E+ELVLKL LLCSH  P ARPSMRQVVQ+L+
Sbjct: 552 LVDWVYNCWKKGEILEARDPNLGANYRPDEVELVLKLALLCSHSEPLARPSMRQVVQYLE 611

Query: 362 KDVPLLELSSFGFNAGCITCG-QEGFEEFVSSSLHSSD 472
           KDVPL +LS    ++  +T G  E F++   S   S D
Sbjct: 612 KDVPLPDLSMLSLSSIGLTFGLHEDFQDCPMSYPSSMD 649


>ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2-like
            [Vitis vinifera]
          Length = 1258

 Score =  184 bits (468), Expect = 1e-44
 Identities = 96/161 (59%), Positives = 116/161 (72%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2    HGTNPETADVVGTLGYLAPEMTRTGKGTTSTDVFAFGAFILEVACGRKPIQQLASDRKII 181
            HGT+P+T  VVGTLGYLAPE TRTGK TT TDV+AFGAF+LEVACGR+PI  +     +I
Sbjct: 1086 HGTDPQTTHVVGTLGYLAPEHTRTGKATTRTDVYAFGAFLLEVACGRRPIAPMED---LI 1142

Query: 182  LVDWVVSCWSRGAILETTDPSLVSDYITEEMELVLKLGLLCSHKIPAARPSMRQVVQFLD 361
            LVDWV   W+RG IL+ +DP L  DY  EEMELVLKLGL+CSH  P ARPSM QVVQ+L+
Sbjct: 1143 LVDWVFFFWNRGEILQASDPKLGVDYNAEEMELVLKLGLMCSHSEPNARPSMPQVVQYLE 1202

Query: 362  KDVPLLELSSFGFNA-GCITCGQEGFEEFVSSSLHSSDLNY 481
            + VPL E +S G +A G     +EGF++F  S   S D  +
Sbjct: 1203 RTVPLPEFTSLGLSANGLSFAHREGFDDFALSYPFSLDKTF 1243



 Score =  113 bits (283), Expect = 4e-23
 Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 10/112 (8%)
 Frame = +2

Query: 2   HGTNPETADVVGTLGYLAPEMTRTGKGTTSTDVFAFGAFILEVACGRKPIQQLASDRKII 181
           HG+NP T  VVGTLGYLAPE++RTGK TT++DVFAFGA +LEV CGR+PI+  A   +++
Sbjct: 494 HGSNPGTTRVVGTLGYLAPELSRTGKATTNSDVFAFGALLLEVTCGRRPIEAKALPEELV 553

Query: 182 LVDWVVSCWSRGAILETTDPSLVSDY----------ITEEMELVLKLGLLCS 307
           LVDWV   W+ G ILE  D +L   Y          +T  + LV  L LL S
Sbjct: 554 LVDWVWDKWTEGRILEAVDSTLTGQYDEGEFSFPFTLTMYLRLVTLLFLLAS 605


>ref|XP_003552189.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IV.1-like [Glycine max]
          Length = 667

 Score =  184 bits (468), Expect = 1e-44
 Identities = 94/162 (58%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   HGTNPETADVVGTLGYLAPEMTRTGKGTTSTDVFAFGAFILEVACGRKPIQQLASDRKII 181
           HGT+P T  VVGTLGYLAPE TRTGK TTS+DVFAFGAF+LEV CGR+PI++       I
Sbjct: 492 HGTDPHTTHVVGTLGYLAPEHTRTGKATTSSDVFAFGAFMLEVVCGRRPIEKGGESGSEI 551

Query: 182 LVDWVVSCWSRGAILETTDPSLVSDYITEEMELVLKLGLLCSHKIPAARPSMRQVVQFLD 361
           LVDWV +CW +G ILE+ DP+L ++Y  +E+ELVLKL LLCSH  P ARPSMRQVVQ+L+
Sbjct: 552 LVDWVYNCWKKGEILESMDPNLGANYRPDEVELVLKLALLCSHSEPLARPSMRQVVQYLE 611

Query: 362 KDVPLLELSSFGFNAGCITCG-QEGFEEFVSSSLHSSDLNYP 484
           KDVPL +L     ++  +T G  E F++   S  + S +N P
Sbjct: 612 KDVPLPDLCMLSLSSNGLTFGLHEDFQDCPMS--YPSSMNRP 651


Top