BLASTX nr result
ID: Coptis24_contig00005243
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005243 (734 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24753.3| unnamed protein product [Vitis vinifera] 64 3e-08 ref|XP_002309715.1| predicted protein [Populus trichocarpa] gi|2... 63 5e-08 ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ... 61 3e-07 emb|CAN60472.1| hypothetical protein VITISV_028412 [Vitis vinifera] 61 3e-07 ref|XP_002335420.1| predicted protein [Populus trichocarpa] gi|2... 60 6e-07 >emb|CBI24753.3| unnamed protein product [Vitis vinifera] Length = 597 Score = 63.9 bits (154), Expect = 3e-08 Identities = 35/68 (51%), Positives = 42/68 (61%) Frame = -1 Query: 554 DGDFILNPLSYPIGENTSKNYLQKLFGSFPSTKAASNKDQEVEFSDAEYQIFEQDSDDNA 375 D + L SY EN S++YLQ LFGSF TKA + Q+ + SD EYQI+EQDS Sbjct: 532 DDEDSLQSRSYLDAENISRDYLQGLFGSFSFTKAGGGEVQDADTSDGEYQIYEQDS--LG 589 Query: 374 NYSGDDDY 351 YS DDDY Sbjct: 590 EYSDDDDY 597 >ref|XP_002309715.1| predicted protein [Populus trichocarpa] gi|222852618|gb|EEE90165.1| predicted protein [Populus trichocarpa] Length = 515 Score = 63.2 bits (152), Expect = 5e-08 Identities = 32/71 (45%), Positives = 48/71 (67%) Frame = -1 Query: 569 QVDAGDGDFILNPLSYPIGENTSKNYLQKLFGSFPSTKAASNKDQEVEFSDAEYQIFEQD 390 ++++ DG+ L+ + ENTS +YLQ+L SFPS A+ +K Q+ E SD EYQI+EQD Sbjct: 445 ELESDDGEEELDTWNGFAMENTSTSYLQQLLNSFPSMDASVDKKQDGESSDGEYQIYEQD 504 Query: 389 SDDNANYSGDD 357 +D+N + DD Sbjct: 505 NDENDLVNNDD 515 >ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis vinifera] Length = 568 Score = 60.8 bits (146), Expect = 3e-07 Identities = 31/54 (57%), Positives = 37/54 (68%) Frame = -1 Query: 512 ENTSKNYLQKLFGSFPSTKAASNKDQEVEFSDAEYQIFEQDSDDNANYSGDDDY 351 EN S++YLQ LFGSF TKA + Q+ + SD EYQI+EQDS YS DDDY Sbjct: 517 ENISRDYLQGLFGSFSFTKAGGGEVQDADTSDGEYQIYEQDS--LGEYSDDDDY 568 >emb|CAN60472.1| hypothetical protein VITISV_028412 [Vitis vinifera] Length = 342 Score = 60.8 bits (146), Expect = 3e-07 Identities = 31/54 (57%), Positives = 37/54 (68%) Frame = -1 Query: 512 ENTSKNYLQKLFGSFPSTKAASNKDQEVEFSDAEYQIFEQDSDDNANYSGDDDY 351 EN S++YLQ LFGSF TKA + Q+ + SD EYQI+EQDS YS DDDY Sbjct: 291 ENISRDYLQGLFGSFSFTKAGGGEVQDADTSDGEYQIYEQDS--LGEYSDDDDY 342 >ref|XP_002335420.1| predicted protein [Populus trichocarpa] gi|222834151|gb|EEE72628.1| predicted protein [Populus trichocarpa] Length = 71 Score = 59.7 bits (143), Expect = 6e-07 Identities = 38/71 (53%), Positives = 46/71 (64%), Gaps = 2/71 (2%) Frame = -1 Query: 560 AGDGDFI-LNPLSYPIGENTSKNYLQKLFGSFPSTKAASNKDQE-VEFSDAEYQIFEQDS 387 AG+ D + LN SY ENTS +YLQ+L GSFPS +K Q+ E SD EYQI+EQD Sbjct: 4 AGEADNLSLN--SYSHMENTSTSYLQQLLGSFPSMDTNGDKKQDGGESSDGEYQIYEQDD 61 Query: 386 DDNANYSGDDD 354 D+ NY DDD Sbjct: 62 DE--NYLDDDD 70