BLASTX nr result

ID: Coptis24_contig00005239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005239
         (1466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36770.3| unnamed protein product [Vitis vinifera]              109   2e-39
ref|XP_002280804.2| PREDICTED: kinesin-related protein 2-like [V...   109   2e-38
ref|XP_004172685.1| PREDICTED: kinesin-1-like [Cucumis sativus]       106   1e-37
ref|XP_004139357.1| PREDICTED: kinesin-1-like [Cucumis sativus]       106   1e-37
gb|ABR67411.1| kinesin [Cucumis melo subsp. melo]                     106   2e-36

>emb|CBI36770.3| unnamed protein product [Vitis vinifera]
          Length = 1347

 Score =  109 bits (273), Expect(4) = 2e-39
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = +2

Query: 302 FVQVNPSFADSVETLCSLNFANPLRGVEHGPEHKQVDPQELFKYKQMAEKQRQEEREIMK 481
           FVQ++PS AD  ETLCSLNFA+ +RG+E GP  KQ D  E+FKYKQ+AEK + +E+E  K
Sbjct: 410 FVQISPSAADLGETLCSLNFASRVRGIECGPVRKQADLTEIFKYKQLAEKLKHDEKETKK 469

Query: 482 LQNNFQSLQLRFAALEQLFRSLQEKTRS*ES 574
           LQ+N QSLQL+ AA E + RSLQEK R  E+
Sbjct: 470 LQDNLQSLQLKLAAREHICRSLQEKVRDLEN 500



 Score = 51.6 bits (122), Expect(4) = 2e-39
 Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
 Frame = +3

Query: 558 QDLESQLAEERKARLQQENRVVVAPA-KSSFSLEFSYQNQKVWT*KKSPLGRSKLRPPLI 734
           +DLE+QLAEERK RL+QE R + A   K   S     Q  K    KK PL  SK R PL 
Sbjct: 496 RDLENQLAEERKTRLKQETRAIAAACPKPPASSSLLKQPLKTIAEKKPPL-PSKPRMPLR 554

Query: 735 GITNL--PSMPKIPCKTGTTNHTSSSSIAEKDNISGTVRTKQHQNS 866
            I+N   P  P  P KT +++    +S  +K+N+  T     +  S
Sbjct: 555 RISNFLPPPSPIPPHKTMSSSSIHPASTDDKENMLRTTAAATNTKS 600



 Score = 37.0 bits (84), Expect(4) = 2e-39
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 850  SNTKILMQPRQVSIAVR-PP*ALTKFHQHRKQVSIATLHADSHMLSTVKPVN 1002
            +NTK  +QPR+ S AVR PP +  +  Q +++VSIAT   +S+   T  P+N
Sbjct: 596  TNTKSFLQPRRTSFAVRLPPTSTAQVLQPKRRVSIATFRPESNSHMTT-PLN 646



 Score = 32.7 bits (73), Expect(4) = 2e-39
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
 Frame = +2

Query: 1109 GRL*FVRE---LRRISKLFSPMPELN---STPEGEVITSVTGRSKYLGSPS*QHGS 1258
            GR  FVR+   +RRIS++FSP+   +   +TP     T++   SK++GSP  + GS
Sbjct: 656  GRQSFVRDPHRIRRISRIFSPLRRASGATATP-----TAMRSSSKFMGSPPMEAGS 706



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 42/69 (60%), Positives = 52/69 (75%)
 Frame = +2

Query: 302  FVQVNPSFADSVETLCSLNFANPLRGVEHGPEHKQVDPQELFKYKQMAEKQRQEEREIMK 481
            FVQ++PS AD  ETLCSLNFA+ +RG+  GP  KQ D  ELFKYKQ+AEK + EE+E  K
Sbjct: 1257 FVQISPSAADLGETLCSLNFASRVRGIGCGPVRKQADLTELFKYKQLAEKLKHEEKETKK 1316

Query: 482  LQNNFQSLQ 508
            LQ+  +SLQ
Sbjct: 1317 LQDVCRSLQ 1325


>ref|XP_002280804.2| PREDICTED: kinesin-related protein 2-like [Vitis vinifera]
          Length = 783

 Score =  109 bits (273), Expect(4) = 2e-38
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = +2

Query: 302 FVQVNPSFADSVETLCSLNFANPLRGVEHGPEHKQVDPQELFKYKQMAEKQRQEEREIMK 481
           FVQ++PS AD  ETLCSLNFA+ +RG+E GP  KQ D  E+FKYKQ+AEK + +E+E  K
Sbjct: 430 FVQISPSAADLGETLCSLNFASRVRGIECGPVRKQADLTEIFKYKQLAEKLKHDEKETKK 489

Query: 482 LQNNFQSLQLRFAALEQLFRSLQEKTRS*ES 574
           LQ+N QSLQL+ AA E + RSLQEK R  E+
Sbjct: 490 LQDNLQSLQLKLAAREHICRSLQEKVRDLEN 520



 Score = 51.6 bits (122), Expect(4) = 2e-38
 Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
 Frame = +3

Query: 558 QDLESQLAEERKARLQQENRVVVAPA-KSSFSLEFSYQNQKVWT*KKSPLGRSKLRPPLI 734
           +DLE+QLAEERK RL+QE R + A   K   S     Q  K    KK PL  SK R PL 
Sbjct: 516 RDLENQLAEERKTRLKQETRAIAAACPKPPASSSLLKQPLKTIAEKKPPL-PSKPRMPLR 574

Query: 735 GITNL--PSMPKIPCKTGTTNHTSSSSIAEKDNISGTVRTKQHQNS 866
            I+N   P  P  P KT +++    +S  +K+N+  T     +  S
Sbjct: 575 RISNFLPPPSPIPPHKTMSSSSIHPASTDDKENMLRTTAAATNTKS 620



 Score = 37.0 bits (84), Expect(4) = 2e-38
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 850  SNTKILMQPRQVSIAVR-PP*ALTKFHQHRKQVSIATLHADSHMLSTVKPVN 1002
            +NTK  +QPR+ S AVR PP +  +  Q +++VSIAT   +S+   T  P+N
Sbjct: 616  TNTKSFLQPRRTSFAVRLPPTSTAQVLQPKRRVSIATFRPESNSHMTT-PLN 666



 Score = 29.3 bits (64), Expect(4) = 2e-38
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 26/76 (34%)
 Frame = +2

Query: 1109 GRL*FVRE---LRRISKLFSPM-----------------------PELNSTPEGEVITSV 1210
            GR  FVR+   +RRIS++FSP+                       P + +TP     T++
Sbjct: 676  GRQSFVRDPHRIRRISRIFSPLRRASGATVQATPTAMRSSSRFMGPSMQATP-----TAM 730

Query: 1211 TGRSKYLGSPS*QHGS 1258
               SK++GSP  + GS
Sbjct: 731  RSSSKFMGSPPMEAGS 746


>ref|XP_004172685.1| PREDICTED: kinesin-1-like [Cucumis sativus]
          Length = 794

 Score =  106 bits (264), Expect(3) = 1e-37
 Identities = 53/91 (58%), Positives = 68/91 (74%)
 Frame = +2

Query: 302 FVQVNPSFADSVETLCSLNFANPLRGVEHGPEHKQVDPQELFKYKQMAEKQRQEEREIMK 481
           FVQ++PS AD  ETLCSLNFA+ +RG+E+ P  KQ D  +LFK+KQMAEK + +E+E+ K
Sbjct: 438 FVQISPSAADVGETLCSLNFASRVRGIENAPARKQTDLTDLFKFKQMAEKSKHDEKEMKK 497

Query: 482 LQNNFQSLQLRFAALEQLFRSLQEKTRS*ES 574
           LQ+N Q LQLR AA E   ++LQEK R  ES
Sbjct: 498 LQDNVQYLQLRLAAKEHTCKNLQEKVRDIES 528



 Score = 56.6 bits (135), Expect(3) = 1e-37
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
 Frame = +3

Query: 558  QDLESQLAEERKARLQQENRVV-----VAPAKSSFSLEFSYQNQKVWT*KKSPLGRSKLR 722
            +D+ESQLAEERKARL+QENR +      A   S+          K    KK PLG SKLR
Sbjct: 524  RDIESQLAEERKARLKQENRALATVAGAASQPSAMQTLPKLAGLKTIPEKKPPLGPSKLR 583

Query: 723  PPLIGITN-LPSMPKIPCKTGTTNHTSSSSIAEKDNISGTVRTKQHQNSDATKASLNCSA 899
             PL  ITN +P    IP K              K  +S  + T            +N +A
Sbjct: 584  LPLRKITNFVPPTSPIPSK--------------KRRVSSFINTAPPTEGKENVPKMNSTA 629

Query: 900  ASLSFN*VSSAQKAGLNCYPSRRLTHVIYSETS*LFK 1010
            A+ + N +   +++ L   P+  +T    + T+ +F+
Sbjct: 630  AANTRN-LRLGRRSSLAVRPTSTMTTTTTTTTTQVFQ 665



 Score = 42.4 bits (98), Expect(3) = 1e-37
 Identities = 23/59 (38%), Positives = 32/59 (54%)
 Frame = +2

Query: 1079 KFQTDTGSVRGRL*FVRELRRISKLFSPMPELNSTPEGEVITSVTGRSKYLGSPS*QHG 1255
            KF     ++  +L F     R SKLFSP+PE  +T E   I ++   SK++GSP  Q G
Sbjct: 693  KFNNGNAALGAQL-FAARKARYSKLFSPLPEFQTTVEATPIAAMRSSSKFMGSPPTQGG 750


>ref|XP_004139357.1| PREDICTED: kinesin-1-like [Cucumis sativus]
          Length = 789

 Score =  106 bits (264), Expect(3) = 1e-37
 Identities = 53/91 (58%), Positives = 68/91 (74%)
 Frame = +2

Query: 302 FVQVNPSFADSVETLCSLNFANPLRGVEHGPEHKQVDPQELFKYKQMAEKQRQEEREIMK 481
           FVQ++PS AD  ETLCSLNFA+ +RG+E+ P  KQ D  +LFK+KQMAEK + +E+E+ K
Sbjct: 433 FVQISPSAADVGETLCSLNFASRVRGIENAPARKQTDLTDLFKFKQMAEKSKHDEKEMKK 492

Query: 482 LQNNFQSLQLRFAALEQLFRSLQEKTRS*ES 574
           LQ+N Q LQLR AA E   ++LQEK R  ES
Sbjct: 493 LQDNVQYLQLRLAAKEHTCKNLQEKVRDIES 523



 Score = 56.6 bits (135), Expect(3) = 1e-37
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
 Frame = +3

Query: 558  QDLESQLAEERKARLQQENRVV-----VAPAKSSFSLEFSYQNQKVWT*KKSPLGRSKLR 722
            +D+ESQLAEERKARL+QENR +      A   S+          K    KK PLG SKLR
Sbjct: 519  RDIESQLAEERKARLKQENRALATVAGAASQPSAMQTLPKLAGLKTIPEKKPPLGPSKLR 578

Query: 723  PPLIGITN-LPSMPKIPCKTGTTNHTSSSSIAEKDNISGTVRTKQHQNSDATKASLNCSA 899
             PL  ITN +P    IP K              K  +S  + T            +N +A
Sbjct: 579  LPLRKITNFVPPTSPIPSK--------------KRRVSSFINTAPPTEGKENVPKMNSTA 624

Query: 900  ASLSFN*VSSAQKAGLNCYPSRRLTHVIYSETS*LFK 1010
            A+ + N +   +++ L   P+  +T    + T+ +F+
Sbjct: 625  AANTRN-LRLGRRSSLAVRPTSTMTTTTTTTTTQVFQ 660



 Score = 42.4 bits (98), Expect(3) = 1e-37
 Identities = 23/59 (38%), Positives = 32/59 (54%)
 Frame = +2

Query: 1079 KFQTDTGSVRGRL*FVRELRRISKLFSPMPELNSTPEGEVITSVTGRSKYLGSPS*QHG 1255
            KF     ++  +L F     R SKLFSP+PE  +T E   I ++   SK++GSP  Q G
Sbjct: 688  KFNNGNAALGAQL-FAARKARYSKLFSPLPEFQTTVEATPIAAMRSSSKFMGSPPTQGG 745


>gb|ABR67411.1| kinesin [Cucumis melo subsp. melo]
          Length = 791

 Score =  106 bits (264), Expect(3) = 2e-36
 Identities = 53/91 (58%), Positives = 68/91 (74%)
 Frame = +2

Query: 302 FVQVNPSFADSVETLCSLNFANPLRGVEHGPEHKQVDPQELFKYKQMAEKQRQEEREIMK 481
           FVQ++PS AD  ETLCSLNFA+ +RG+E+ P  KQ D  +LFK+KQMAEK + +E+E+ K
Sbjct: 433 FVQISPSAADVGETLCSLNFASRVRGIENAPARKQTDLTDLFKFKQMAEKSKHDEKEMKK 492

Query: 482 LQNNFQSLQLRFAALEQLFRSLQEKTRS*ES 574
           LQ+N Q LQLR AA E   ++LQEK R  ES
Sbjct: 493 LQDNVQYLQLRLAAKEHTCKNLQEKVRDLES 523



 Score = 56.6 bits (135), Expect(3) = 2e-36
 Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
 Frame = +3

Query: 558  QDLESQLAEERKARLQQENRVV-----VAPAKSSFSLEFSYQNQKVWT*KKSPLGRSKLR 722
            +DLESQLAEERKARL+QENR +      A   S+          K    KK PLG SKLR
Sbjct: 519  RDLESQLAEERKARLKQENRALATVAGAASQPSAMQPLPKLAGLKTIPEKKPPLGPSKLR 578

Query: 723  PPLIGITN-LPSMPKIPCKTGTTNHTSSSSIAEKDNISGTVRTKQHQNSDATKASLNCSA 899
             PL  ITN +P    IP K              K  +S  + T            +N +A
Sbjct: 579  LPLRKITNFVPPTSPIPSK--------------KRRVSSFINTAPPTEGKENVPKMNTTA 624

Query: 900  ASLSFN*VSSAQKAGLNCYPSRRLTHVIYSETS*LFK 1010
            A+ + N +   +++ L   P+  +T    + T+ +F+
Sbjct: 625  AANTRN-LRLGRRSSLAVRPTSTMTTTTTTTTTQVFQ 660



 Score = 38.1 bits (87), Expect(3) = 2e-36
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +2

Query: 1079 KFQTDTGSVRGRL*FVRELRRISKLFSPMPELNSTP-EGEVITSVTGRSKYLGSPS*QHG 1255
            KF     ++  +L F     R SKLFSP+PE  +T  E   I ++   SK++GSP  Q G
Sbjct: 688  KFNNGNAALGAQL-FAARKARYSKLFSPLPEFQTTTVEATPIAAMRSSSKFMGSPPTQGG 746


Top