BLASTX nr result

ID: Coptis24_contig00005234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005234
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538155.1| PREDICTED: long chain acyl-CoA synthetase 4-...    86   3e-14
ref|XP_003517504.1| PREDICTED: uncharacterized protein LOC100815...    85   5e-14
ref|XP_003517505.1| PREDICTED: uncharacterized protein LOC100815...    85   5e-14
ref|XP_002269278.1| PREDICTED: uncharacterized protein LOC100241...    85   5e-14
emb|CBI34489.3| unnamed protein product [Vitis vinifera]               83   1e-13

>ref|XP_003538155.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Glycine max]
          Length = 832

 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = -1

Query: 1342 RQRSSNKSQKPYNTPAGNGNSSKVRRFMDSRSSLRQGALAQRRSNFQGKQFPIXXXXXXX 1163
            ++R  NKSQK ++       S+KV+R+M+SRSSLRQGALA+RRSNFQG QFP        
Sbjct: 37   QRRVPNKSQK-FSNNFTQDKSAKVQRYMESRSSLRQGALAKRRSNFQGNQFPAAVEVARK 95

Query: 1162 XXXAPLRNRPLNHNRMANWNKSR 1094
               APL NR  N NR+ANWNK+R
Sbjct: 96   AVTAPLHNRVPNRNRVANWNKTR 118


>ref|XP_003517504.1| PREDICTED: uncharacterized protein LOC100815497 isoform 1 [Glycine
            max]
          Length = 202

 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 46/82 (56%), Positives = 56/82 (68%)
 Frame = -1

Query: 1339 QRSSNKSQKPYNTPAGNGNSSKVRRFMDSRSSLRQGALAQRRSNFQGKQFPIXXXXXXXX 1160
            +R  NKSQK ++       S+KV+R+M+SRSSLRQGALA+RRSNFQG QFP         
Sbjct: 38   RRVLNKSQK-FSNNFTQDKSAKVQRYMESRSSLRQGALAKRRSNFQGNQFPAAVEVARKA 96

Query: 1159 XXAPLRNRPLNHNRMANWNKSR 1094
              APL NR  N NR+ANWNK+R
Sbjct: 97   VTAPLHNRVPNRNRVANWNKTR 118


>ref|XP_003517505.1| PREDICTED: uncharacterized protein LOC100815497 isoform 2 [Glycine
            max] gi|255635708|gb|ACU18203.1| unknown [Glycine max]
          Length = 118

 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 46/82 (56%), Positives = 56/82 (68%)
 Frame = -1

Query: 1339 QRSSNKSQKPYNTPAGNGNSSKVRRFMDSRSSLRQGALAQRRSNFQGKQFPIXXXXXXXX 1160
            +R  NKSQK ++       S+KV+R+M+SRSSLRQGALA+RRSNFQG QFP         
Sbjct: 38   RRVLNKSQK-FSNNFTQDKSAKVQRYMESRSSLRQGALAKRRSNFQGNQFPAAVEVARKA 96

Query: 1159 XXAPLRNRPLNHNRMANWNKSR 1094
              APL NR  N NR+ANWNK+R
Sbjct: 97   VTAPLHNRVPNRNRVANWNKTR 118


>ref|XP_002269278.1| PREDICTED: uncharacterized protein LOC100241044 [Vitis vinifera]
          Length = 211

 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 43/88 (48%), Positives = 56/88 (63%)
 Frame = -1

Query: 1357 SAKVNRQRSSNKSQKPYNTPAGNGNSSKVRRFMDSRSSLRQGALAQRRSNFQGKQFPIXX 1178
            + K  + R+ ++SQK + +      S+K+RRFMDSRSSLRQG LAQRRSNFQ  QFP+  
Sbjct: 33   TVKDKKPRTVSRSQK-FLSGIAQDKSAKMRRFMDSRSSLRQGVLAQRRSNFQANQFPLAN 91

Query: 1177 XXXXXXXXAPLRNRPLNHNRMANWNKSR 1094
                     P+RNR  N NR+ NWN+ R
Sbjct: 92   EVARKAAAVPIRNRAFNRNRVPNWNRPR 119


>emb|CBI34489.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 42/86 (48%), Positives = 55/86 (63%)
 Frame = -1

Query: 1357 SAKVNRQRSSNKSQKPYNTPAGNGNSSKVRRFMDSRSSLRQGALAQRRSNFQGKQFPIXX 1178
            + K  + R+ ++SQK + +      S+K+RRFMDSRSSLRQG LAQRRSNFQ  QFP+  
Sbjct: 51   TVKDKKPRTVSRSQK-FLSGIAQDKSAKMRRFMDSRSSLRQGVLAQRRSNFQANQFPLAN 109

Query: 1177 XXXXXXXXAPLRNRPLNHNRMANWNK 1100
                     P+RNR  N NR+ NWN+
Sbjct: 110  EVARKAAAVPIRNRAFNRNRVPNWNR 135


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