BLASTX nr result
ID: Coptis24_contig00005232
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005232 (449 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19788.3| unnamed protein product [Vitis vinifera] 248 5e-64 ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis v... 248 5e-64 ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cu... 246 1e-63 ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co... 245 2e-63 ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, pa... 244 5e-63 >emb|CBI19788.3| unnamed protein product [Vitis vinifera] Length = 1062 Score = 248 bits (632), Expect = 5e-64 Identities = 120/151 (79%), Positives = 132/151 (87%), Gaps = 2/151 (1%) Frame = -3 Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268 VWD TKR GIQTFRREHDRFW+L HPEMNL+AAGHDSGMIVFKLERERPAFSVSGD LY Sbjct: 274 VWDATKRTGIQTFRREHDRFWILTAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDCLY 333 Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88 YVKDRFLR+Y F TQKD Q IPIRRPGS +LNQ P+TLSY+PTENAVL+ SDVDGGSYEL Sbjct: 334 YVKDRFLRLYEFSTQKDAQVIPIRRPGSAALNQGPRTLSYSPTENAVLICSDVDGGSYEL 393 Query: 87 YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1 Y++P+D GR D+ QD RG+G SAVFVARN Sbjct: 394 YIVPRDSIGRGDTVQDAKRGVGGSAVFVARN 424 >ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis vinifera] Length = 1217 Score = 248 bits (632), Expect = 5e-64 Identities = 120/151 (79%), Positives = 132/151 (87%), Gaps = 2/151 (1%) Frame = -3 Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268 VWD TKR GIQTFRREHDRFW+L HPEMNL+AAGHDSGMIVFKLERERPAFSVSGD LY Sbjct: 274 VWDATKRTGIQTFRREHDRFWILTAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDCLY 333 Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88 YVKDRFLR+Y F TQKD Q IPIRRPGS +LNQ P+TLSY+PTENAVL+ SDVDGGSYEL Sbjct: 334 YVKDRFLRLYEFSTQKDAQVIPIRRPGSAALNQGPRTLSYSPTENAVLICSDVDGGSYEL 393 Query: 87 YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1 Y++P+D GR D+ QD RG+G SAVFVARN Sbjct: 394 YIVPRDSIGRGDTVQDAKRGVGGSAVFVARN 424 >ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus] gi|449483541|ref|XP_004156620.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus] Length = 1217 Score = 246 bits (628), Expect = 1e-63 Identities = 118/151 (78%), Positives = 133/151 (88%), Gaps = 2/151 (1%) Frame = -3 Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268 VWDVTKR G+QTFRREHDRFW+LA HPEMNL+AAGHDSGMIVFKLERERPAF +SGDSL Sbjct: 274 VWDVTKRTGVQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFVISGDSLL 333 Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88 Y KDRFLR Y F TQKDTQ IPIRRPGS+SLNQSP+T+SY+PTENA+L+ SD++GGSYEL Sbjct: 334 YTKDRFLRFYEFSTQKDTQVIPIRRPGSISLNQSPRTISYSPTENAILICSDLEGGSYEL 393 Query: 87 YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1 Y +PK+ GR DS QD RG+G SAVFVARN Sbjct: 394 YTIPKESIGRGDSVQDAKRGVGGSAVFVARN 424 >ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis] gi|223547980|gb|EEF49472.1| coatomer alpha subunit, putative [Ricinus communis] Length = 1217 Score = 245 bits (626), Expect = 2e-63 Identities = 118/151 (78%), Positives = 133/151 (88%), Gaps = 2/151 (1%) Frame = -3 Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268 VWDVTKR G+QTFRREHDRFW+LA HPEMNL+AAGHDSGMIVFKLERERPAF+VSGDSL+ Sbjct: 274 VWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLF 333 Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88 Y KDRFLR Y F TQ+DTQ IPIRRPG+ SLNQSP+TLSY+PTENAVL+ SDVDGG+YEL Sbjct: 334 YAKDRFLRFYEFSTQRDTQVIPIRRPGTTSLNQSPRTLSYSPTENAVLICSDVDGGTYEL 393 Query: 87 YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1 YV+PKD R D+ Q+ RG G SA+FVARN Sbjct: 394 YVIPKDSISRGDTVQEAKRGAGGSAIFVARN 424 >ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, partial [Cucumis sativus] Length = 855 Score = 244 bits (623), Expect = 5e-63 Identities = 116/151 (76%), Positives = 131/151 (86%), Gaps = 2/151 (1%) Frame = -3 Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268 +WD TKR G+QTFRREHDRFW+LA HPEMNL+AAGHDSGMIVFKLERERPAF++SGDSL+ Sbjct: 274 IWDATKRTGLQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFAISGDSLF 333 Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88 YVKDRFLR Y F TQKDTQ +PIRRPGS SLNQSP+TLS++PTEN +L+ SD+DGG YE Sbjct: 334 YVKDRFLRYYEFSTQKDTQVVPIRRPGSTSLNQSPRTLSFSPTENTILVCSDLDGGCYEF 393 Query: 87 YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1 Y +PKD GR DS QD RGLG SAVFVARN Sbjct: 394 YTIPKDSFGRSDSLQDAKRGLGGSAVFVARN 424