BLASTX nr result

ID: Coptis24_contig00005232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005232
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19788.3| unnamed protein product [Vitis vinifera]              248   5e-64
ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis v...   248   5e-64
ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cu...   246   1e-63
ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co...   245   2e-63
ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, pa...   244   5e-63

>emb|CBI19788.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  248 bits (632), Expect = 5e-64
 Identities = 120/151 (79%), Positives = 132/151 (87%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268
           VWD TKR GIQTFRREHDRFW+L  HPEMNL+AAGHDSGMIVFKLERERPAFSVSGD LY
Sbjct: 274 VWDATKRTGIQTFRREHDRFWILTAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDCLY 333

Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88
           YVKDRFLR+Y F TQKD Q IPIRRPGS +LNQ P+TLSY+PTENAVL+ SDVDGGSYEL
Sbjct: 334 YVKDRFLRLYEFSTQKDAQVIPIRRPGSAALNQGPRTLSYSPTENAVLICSDVDGGSYEL 393

Query: 87  YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1
           Y++P+D  GR D+ QD  RG+G SAVFVARN
Sbjct: 394 YIVPRDSIGRGDTVQDAKRGVGGSAVFVARN 424


>ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis vinifera]
          Length = 1217

 Score =  248 bits (632), Expect = 5e-64
 Identities = 120/151 (79%), Positives = 132/151 (87%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268
           VWD TKR GIQTFRREHDRFW+L  HPEMNL+AAGHDSGMIVFKLERERPAFSVSGD LY
Sbjct: 274 VWDATKRTGIQTFRREHDRFWILTAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDCLY 333

Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88
           YVKDRFLR+Y F TQKD Q IPIRRPGS +LNQ P+TLSY+PTENAVL+ SDVDGGSYEL
Sbjct: 334 YVKDRFLRLYEFSTQKDAQVIPIRRPGSAALNQGPRTLSYSPTENAVLICSDVDGGSYEL 393

Query: 87  YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1
           Y++P+D  GR D+ QD  RG+G SAVFVARN
Sbjct: 394 YIVPRDSIGRGDTVQDAKRGVGGSAVFVARN 424


>ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus]
           gi|449483541|ref|XP_004156620.1| PREDICTED: coatomer
           subunit alpha-1-like [Cucumis sativus]
          Length = 1217

 Score =  246 bits (628), Expect = 1e-63
 Identities = 118/151 (78%), Positives = 133/151 (88%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268
           VWDVTKR G+QTFRREHDRFW+LA HPEMNL+AAGHDSGMIVFKLERERPAF +SGDSL 
Sbjct: 274 VWDVTKRTGVQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFVISGDSLL 333

Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88
           Y KDRFLR Y F TQKDTQ IPIRRPGS+SLNQSP+T+SY+PTENA+L+ SD++GGSYEL
Sbjct: 334 YTKDRFLRFYEFSTQKDTQVIPIRRPGSISLNQSPRTISYSPTENAILICSDLEGGSYEL 393

Query: 87  YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1
           Y +PK+  GR DS QD  RG+G SAVFVARN
Sbjct: 394 YTIPKESIGRGDSVQDAKRGVGGSAVFVARN 424


>ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis]
           gi|223547980|gb|EEF49472.1| coatomer alpha subunit,
           putative [Ricinus communis]
          Length = 1217

 Score =  245 bits (626), Expect = 2e-63
 Identities = 118/151 (78%), Positives = 133/151 (88%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268
           VWDVTKR G+QTFRREHDRFW+LA HPEMNL+AAGHDSGMIVFKLERERPAF+VSGDSL+
Sbjct: 274 VWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLF 333

Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88
           Y KDRFLR Y F TQ+DTQ IPIRRPG+ SLNQSP+TLSY+PTENAVL+ SDVDGG+YEL
Sbjct: 334 YAKDRFLRFYEFSTQRDTQVIPIRRPGTTSLNQSPRTLSYSPTENAVLICSDVDGGTYEL 393

Query: 87  YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1
           YV+PKD   R D+ Q+  RG G SA+FVARN
Sbjct: 394 YVIPKDSISRGDTVQEAKRGAGGSAIFVARN 424


>ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, partial [Cucumis sativus]
          Length = 855

 Score =  244 bits (623), Expect = 5e-63
 Identities = 116/151 (76%), Positives = 131/151 (86%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 VWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDSGMIVFKLERERPAFSVSGDSLY 268
           +WD TKR G+QTFRREHDRFW+LA HPEMNL+AAGHDSGMIVFKLERERPAF++SGDSL+
Sbjct: 274 IWDATKRTGLQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFAISGDSLF 333

Query: 267 YVKDRFLRIYGFITQKDTQGIPIRRPGSLSLNQSPKTLSYNPTENAVLLSSDVDGGSYEL 88
           YVKDRFLR Y F TQKDTQ +PIRRPGS SLNQSP+TLS++PTEN +L+ SD+DGG YE 
Sbjct: 334 YVKDRFLRYYEFSTQKDTQVVPIRRPGSTSLNQSPRTLSFSPTENTILVCSDLDGGCYEF 393

Query: 87  YVLPKD--GRVDSAQDVMRGLGVSAVFVARN 1
           Y +PKD  GR DS QD  RGLG SAVFVARN
Sbjct: 394 YTIPKDSFGRSDSLQDAKRGLGGSAVFVARN 424


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