BLASTX nr result
ID: Coptis24_contig00005226
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005226 (769 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplasti... 287 2e-75 ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ri... 285 8e-75 dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare] 283 3e-74 dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare] 283 3e-74 gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indi... 282 6e-74 >ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplastic [Vitis vinifera] gi|297739542|emb|CBI29724.3| unnamed protein product [Vitis vinifera] Length = 227 Score = 287 bits (735), Expect = 2e-75 Identities = 147/169 (86%), Positives = 159/169 (94%), Gaps = 1/169 (0%) Frame = +1 Query: 28 PHRSR-QVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKL 204 P R+R +VVKAVATPDSA+ELPLTAENVESVLDE+RPYL++DGGNV LHEIDGNVVRLKL Sbjct: 55 PIRTRSRVVKAVATPDSAVELPLTAENVESVLDEIRPYLISDGGNVALHEIDGNVVRLKL 114 Query: 205 QGACGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYL 384 QGACGSCPSS++TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL EIRPYL Sbjct: 115 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 174 Query: 385 IGTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 531 +G GG L+LV IDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA Sbjct: 175 VGAAGGSLELVGIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 223 Score = 58.9 bits (141), Expect = 1e-06 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Frame = +1 Query: 262 RRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGTGGGDLKLVAIDEPIVK 441 R + T +V D L L EN+E VL EIRPYLI + GG++ L ID +V+ Sbjct: 53 RNPIRTRSRVVKAVATPDSAVELPLTAENVESVLDEIRPYLI-SDGGNVALHEIDGNVVR 111 Query: 442 VRITGPA----AGVMTVRVAVTQKLREKIPAIAA 531 +++ G + VMT+++ + ++L EKIP I A Sbjct: 112 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA 145 >ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis] gi|223531541|gb|EEF33371.1| Nitrogen fixation protein nifU, putative [Ricinus communis] Length = 226 Score = 285 bits (729), Expect = 8e-75 Identities = 148/174 (85%), Positives = 159/174 (91%), Gaps = 5/174 (2%) Frame = +1 Query: 25 IPHRS-----RQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNV 189 IP RS R VV+AVATP+SALELPLTAENVESVLDEVRPYL+ADGGNV LHEIDGNV Sbjct: 49 IPCRSVRLTRRLVVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 108 Query: 190 VRLKLQGACGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGE 369 VRLKLQGACGSCPSS++TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL E Sbjct: 109 VRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEE 168 Query: 370 IRPYLIGTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 531 IRPYL+G GG L+LVAI+EPI K+RITGPAAGVMTVRVAVTQKLREKIPAIAA Sbjct: 169 IRPYLVGAAGGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAA 222 >dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 227 Score = 283 bits (724), Expect = 3e-74 Identities = 142/166 (85%), Positives = 155/166 (93%) Frame = +1 Query: 34 RSRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 213 R RQVV+A+A PD A+ELPLTAENVE VLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA Sbjct: 57 RRRQVVQAIANPDPAVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 116 Query: 214 CGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGT 393 CGSCP+S+ TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL EIRPYL GT Sbjct: 117 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLDEIRPYLSGT 176 Query: 394 GGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 531 GGG+L+ V+I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAA Sbjct: 177 GGGELEFVSIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAA 222 >dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 225 Score = 283 bits (724), Expect = 3e-74 Identities = 142/166 (85%), Positives = 155/166 (93%) Frame = +1 Query: 34 RSRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 213 R RQVV+A+A PD A+ELPLTAENVE VLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA Sbjct: 55 RRRQVVQAIANPDPAVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 114 Query: 214 CGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGT 393 CGSCP+S+ TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL EIRPYL GT Sbjct: 115 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLDEIRPYLSGT 174 Query: 394 GGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 531 GGG+L+ V+I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAA Sbjct: 175 GGGELEFVSIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAA 220 >gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indica Group] Length = 228 Score = 282 bits (721), Expect = 6e-74 Identities = 141/166 (84%), Positives = 154/166 (92%) Frame = +1 Query: 34 RSRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 213 R +QVVKA+A PD A+ELPLTAENVE VLDEVRPYLMADGGNV LHEIDGNVVRLKLQGA Sbjct: 58 RQQQVVKAIANPDPAVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGA 117 Query: 214 CGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGT 393 CGSCP+S+ TMKMGIERRLME IPEIVAVEP+ DEETGLELN+ENIE+VL EIRPYL GT Sbjct: 118 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLSGT 177 Query: 394 GGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 531 GGG+L+ VAI+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAA Sbjct: 178 GGGELEFVAIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAA 223