BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005225
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...   149   6e-34
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]   149   6e-34
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
emb|CBI16457.3| unnamed protein product [Vitis vinifera]              138   1e-30
ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|2...   136   4e-30

>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1148

 Score =  149 bits (376), Expect = 6e-34
 Identities = 100/257 (38%), Positives = 137/257 (53%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    RGFPKGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDN 180
            RG  +GSS  H  ELA+P+G  S+QP++SKKLY+TVFG S +                 N
Sbjct: 462  RGVDQGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEY---N 518

Query: 181  CASSFDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLH 360
            C  S D +A EDK+ +T   E  ++ +++  E    N    A H  D  L  +EE  +LH
Sbjct: 519  CMRSSDDSAVEDKQALTHFSEAVKHTDQHAKEHLMENPYDEAAHPEDGHLLEAEESTRLH 578

Query: 361  K-AFPLEDNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAETVFEQPAANNCN 537
              + P E +   E   + +     GS++M H  P  +ANE  L+ LA +VF+   ++  N
Sbjct: 579  GVSAPGERDPSDEVCDSHIRQVPPGSSHMFHA-PIHRANESTLRTLARSVFDLHISSQSN 637

Query: 538  HNSASVQISHSMHDSFKLSNLSLHVEGQSVSDEYLEEESYFSNIPNDFICPLTGELFEEP 717
              +       +M  S K     LH   Q     Y  E S+FS+IP DFICPLTG LFE+P
Sbjct: 638  SEAIFDPNQTNMESSAK----DLHGNCQ-----YFNEGSFFSSIPQDFICPLTGRLFEDP 688

Query: 718  VTLETGQTFERTAIKEW 768
            VT+ETGQTFER AI+EW
Sbjct: 689  VTIETGQTFERHAIREW 705


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score =  149 bits (376), Expect = 6e-34
 Identities = 100/257 (38%), Positives = 137/257 (53%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    RGFPKGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDN 180
            RG  +GSS  H  ELA+P+G  S+QP++SKKLY+TVFG S +                 N
Sbjct: 462  RGVDQGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEY---N 518

Query: 181  CASSFDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLH 360
            C  S D +A EDK+ +T   E  ++ +++  E    N    A H  D  L  +EE  +LH
Sbjct: 519  CMRSSDDSAVEDKQALTHFSEAVKHTDQHAKEHXMENPYDEAAHPEDGHLLEAEESTRLH 578

Query: 361  K-AFPLEDNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAETVFEQPAANNCN 537
              + P E +   E   + +     GS++M H  P  +ANE  L+ LA +VF+   ++  N
Sbjct: 579  GVSAPGERDPSDEVCDSHIRQVPPGSSHMFHA-PIHRANESTLRTLARSVFDLHISSQSN 637

Query: 538  HNSASVQISHSMHDSFKLSNLSLHVEGQSVSDEYLEEESYFSNIPNDFICPLTGELFEEP 717
              +       +M  S K     LH   Q     Y  E S+FS+IP DFICPLTG LFE+P
Sbjct: 638  SEAIFDPNQTNMESSAK----DLHGNCQ-----YFNEGSFFSSIPQDFICPLTGRLFEDP 688

Query: 718  VTLETGQTFERTAIKEW 768
            VT+ETGQTFER AI+EW
Sbjct: 689  VTIETGQTFERHAIREW 705


>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
            predicted protein [Populus trichocarpa]
          Length = 1159

 Score =  141 bits (356), Expect = 1e-31
 Identities = 92/253 (36%), Positives = 133/253 (52%), Gaps = 1/253 (0%)
 Frame = +1

Query: 13   KGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDNCASS 192
            +G +  HS   ASP      QP++SKKLYD VFG S K               F+N A+S
Sbjct: 474  QGGTQDHSSGPASPAAPFLPQPMVSKKLYDAVFGHSSK-PRVYDAEENWKADNFNNGANS 532

Query: 193  FDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLHKAFP 372
               +  + K+T+T S E  +Y  ++    +  N+        +  L  S+EE +L     
Sbjct: 533  SGSSPIQVKQTLTSSSEMVKYPGQDIENHSPENLHDNTSILDNGLLSASDEEWKLVNVSV 592

Query: 373  LED-NLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAETVFEQPAANNCNHNSA 549
              D +LK + + +     + G T+ML+   H K NEL LK LA++VF+     +    S 
Sbjct: 593  SPDTDLKDDNRKSSAGQVSAGDTHMLNSSSHTKENELTLKTLAKSVFKIQRTED----SG 648

Query: 550  SVQISHSMHDSFKLSNLSLHVEGQSVSDEYLEEESYFSNIPNDFICPLTGELFEEPVTLE 729
             + +S  +H   K  N S  +EG + S E  +E S F +IP DF+CPLT +LFE+PVTLE
Sbjct: 649  DLTVSDLLHPK-KAINASASIEGLNGSHESFDEGSIFESIPQDFVCPLTRQLFEDPVTLE 707

Query: 730  TGQTFERTAIKEW 768
            TGQTFER AI++W
Sbjct: 708  TGQTFEREAIRKW 720


>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score =  138 bits (348), Expect = 1e-30
 Identities = 95/257 (36%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1    RGFPKGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDN 180
            RG  +GSS  H  ELA+P+G  S+QP++SKKLY+TVFG S +                 N
Sbjct: 426  RGVDQGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEY---N 482

Query: 181  CASSFDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLH 360
            C  S D +A EDK+ +T   E  ++ +++  E    N    A H  D  L  +EE  +LH
Sbjct: 483  CMRSSDDSAVEDKQALTHFSEAVKHTDQHAKEHLMENPYDEAAHPEDGHLLEAEESTRLH 542

Query: 361  -KAFPLEDNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAETVFEQPAANNCN 537
              + P E +   E   + +     GS++M H  P  +ANE  L+ LA +VF+        
Sbjct: 543  GVSAPGERDPSDEVCDSHIRQVPPGSSHMFHA-PIHRANESTLRTLARSVFD-------- 593

Query: 538  HNSASVQISHSMHDSFKLSNLSLHVEGQSVSDEYLEEESYFSNIPNDFICPLTGELFEEP 717
                                  LH+  QS         S+FS+IP DFICPLTG LFE+P
Sbjct: 594  ----------------------LHISSQS-------NRSFFSSIPQDFICPLTGRLFEDP 624

Query: 718  VTLETGQTFERTAIKEW 768
            VT+ETGQTFER AI+EW
Sbjct: 625  VTIETGQTFERHAIREW 641


>ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|222844917|gb|EEE82464.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  136 bits (343), Expect = 4e-30
 Identities = 98/258 (37%), Positives = 125/258 (48%), Gaps = 6/258 (2%)
 Frame = +1

Query: 13   KGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDNCASS 192
            +G S  HS   ASP    S QP +SKKLYD VFG S K               F+N A  
Sbjct: 474  QGGSRDHSSGPASPSAPFSPQPTVSKKLYDAVFGRSSK-PRVHEAEDNGKAENFNNGAHI 532

Query: 193  FDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLHKAFP 372
               +  E K TVT S +   Y  ++    +  N+           L  S +E +L K   
Sbjct: 533  SGSSPIEIKHTVTISFKMVTYPGQDIENHSPENVPDNTSIPGKGLLTASNKEWKLVKVSV 592

Query: 373  LE------DNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAETVFEQPAANNC 534
                    D     A+  P   TT    +ML+   H K NEL LK LA++VFE     + 
Sbjct: 593  SPGTDLNADTCNSSAREEPEGDTT----HMLNSSSHTKENELALKTLAKSVFELQRTEDS 648

Query: 535  NHNSASVQISHSMHDSFKLSNLSLHVEGQSVSDEYLEEESYFSNIPNDFICPLTGELFEE 714
               + S  +SHS     K  N     EG + S E+ +E S F +IP+DFICPLTG+LFE+
Sbjct: 649  GDPTVS-DLSHSK----KAINADASSEGPNGSHEHFDEGSIFDSIPHDFICPLTGQLFED 703

Query: 715  PVTLETGQTFERTAIKEW 768
            PVTLETGQTFER AI+EW
Sbjct: 704  PVTLETGQTFEREAIREW 721