BLASTX nr result
ID: Coptis24_contig00005212
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005212 (1624 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ... 464 e-128 ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2... 458 e-126 ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 433 e-119 ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 419 e-114 ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR... 418 e-114 >ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 421 Score = 464 bits (1194), Expect = e-128 Identities = 234/422 (55%), Positives = 298/422 (70%), Gaps = 1/422 (0%) Frame = +1 Query: 127 GSDRAPDIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPVTS 306 G PD I++LP ++IE IL LP+RDAV+TSILS KWRYRW T+ LVFDD CV + Sbjct: 2 GDYEVPDFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDKCVAMYC 61 Query: 307 SSLAVTKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLEL 486 V +++ V F+ RAL LH GPI KF+LS SYLQ CPDIDQW+LFLS ++KE+ LEL Sbjct: 62 DK-GVLESRLVKFISRALFLHHGPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVLEL 120 Query: 487 EEKEWYKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLSFQQSYFENGVVESILS 666 E EW++VPSCLF+C+ LT LEL RCE PPP FKGF LKSL+ Q +ES++S Sbjct: 121 GEGEWFRVPSCLFNCKKLTRLELTRCEFDPPPNFKGFLCLKSLNLYQVLVAPEAIESLIS 180 Query: 667 SCPILESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIAD 846 CP+LES +L+YFD+L +N+ APNLKYL LEGEFKDICLENTPLL + IA+YMTE+IA+ Sbjct: 181 GCPLLESLSLSYFDSLVLNVRAPNLKYLCLEGEFKDICLENTPLLVAMSIAMYMTEDIAE 240 Query: 847 HLEATTTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSXXXXXXXXXXXXXXXQVGFE 1026 H E +++CN IK LG VP LERL+ YF KYLS+ P QV FE Sbjct: 241 HFEQSSSCNFIKFLGGVPRLERLIGHIYFTKYLSIGDYPGRHPITYSCLKVIELYQVSFE 300 Query: 1027 DVNEISVAICLLVCSPNLEELLFSASSDNEACI-GPDMDYWDKQHPIDCSFKRLQIVNMT 1203 D+ EI V + L+ SPNL+EL S SS+ A + PD+D+W K+ P +C+F++L +V +T Sbjct: 301 DMKEIHVVLRLITNSPNLKELQISGSSNTLAAVEAPDLDFWLKECPRNCTFEKLGVVKLT 360 Query: 1204 DMSGVPDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIYI 1383 DMSGVP EMEF KFLLA SPVL+ MSI Y+ ++G +ML+ELL F R+S QA I++I Sbjct: 361 DMSGVPQEMEFIKFLLANSPVLEMMSITPCVYV-MDGRVNMLVELLKFRRSSAQAEILFI 419 Query: 1384 QD 1389 QD Sbjct: 420 QD 421 >ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1| predicted protein [Populus trichocarpa] Length = 420 Score = 458 bits (1178), Expect = e-126 Identities = 234/419 (55%), Positives = 297/419 (70%), Gaps = 1/419 (0%) Frame = +1 Query: 127 GSDRAPDIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPVTS 306 G PD+IS+LP +++E IL LP+RDAVRTSILS KWRYRWTT+ LVFDD C+ + S Sbjct: 2 GDVEDPDLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWTTLTHLVFDDKCIRMCS 61 Query: 307 SSLAVTKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLEL 486 V + V+F+ RAL LH+GPI KF+LS SYLQ CPDIDQWILFLS ++KE+ LEL Sbjct: 62 DR-PVVENCMVNFITRALFLHQGPIHKFQLSTSYLQCCPDIDQWILFLSRSDIKELVLEL 120 Query: 487 EEKEWYKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLSFQQSYFENGVVESILS 666 E EW++VPSCLF+C+ LT LELFRCE PPPTFKGF L+SLS Q +ES++S Sbjct: 121 GEGEWFRVPSCLFNCKKLTCLELFRCEFDPPPTFKGFLCLRSLSLHQVLVAPEAIESLIS 180 Query: 667 SCPILESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIAD 846 CP+LES L+YFD+L++NI APNLKYL LEGEF DICLENTPLL + +A+YM +E+A+ Sbjct: 181 GCPLLESLALSYFDSLALNIRAPNLKYLCLEGEFTDICLENTPLLVAMSVAMYMNDEMAE 240 Query: 847 HLEATTTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSXXXXXXXXXXXXXXXQVGFE 1026 E ++ CN IK LG VP LERL YF KYLS+ P QV FE Sbjct: 241 CFEQSSKCNFIKFLGGVPRLERLAGHIYFTKYLSIGDYPGSLAITYSHLKIIELYQVSFE 300 Query: 1027 DVNEISVAICLLVCSPNLEELLFSASSDNEACI-GPDMDYWDKQHPIDCSFKRLQIVNMT 1203 D+ EI V + L++ SPNL+EL S SS A + P++++W K+ P DC+FK+L++V MT Sbjct: 301 DMKEIRVVLRLIMNSPNLKELRISGSSTAVASVEAPNLEFWAKECPKDCTFKQLKVVKMT 360 Query: 1204 DMSGVPDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIY 1380 DMSGVP EMEF KFLLA SPVL+TMSI Y+ ++G +MLI+L+ F RAS +A II+ Sbjct: 361 DMSGVPHEMEFMKFLLANSPVLETMSITPCVYV-MDGRLNMLIQLVRFRRASAEAEIIF 418 >ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis vinifera] Length = 414 Score = 433 bits (1114), Expect = e-119 Identities = 223/424 (52%), Positives = 291/424 (68%), Gaps = 5/424 (1%) Frame = +1 Query: 133 DRAP--DIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPVTS 306 D AP D+ISNLPL++IE IL+ LP+R+AVRTSILS KWRYRW+ I LVF+D Sbjct: 2 DDAPKLDLISNLPLSIIESILVRLPIREAVRTSILSSKWRYRWSGITDLVFED------- 54 Query: 307 SSLAVTKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLEL 486 L + K F+ + LLLH GPI KF+++ S L+ CPDIDQWILFLS +VKEI LEL Sbjct: 55 -DLFLLNDKLKKFITQVLLLHAGPIHKFQITTSNLRICPDIDQWILFLSRNDVKEILLEL 113 Query: 487 EEKEWYKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLSFQQSYFENGVVESILS 666 E EW+ VPSCLFSCQ LT LEL RCE+HPPPTFKGF +LK L+ Q ++S++S Sbjct: 114 GECEWFTVPSCLFSCQKLTRLELVRCELHPPPTFKGFLHLKILNLHQVSITCEAIQSLVS 173 Query: 667 SCPILESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIAD 846 SCP+LE +L+YFD+L++NI APNLKYL LEGEFK+ICLENTP L ++ +A+YM++++ + Sbjct: 174 SCPLLECLSLSYFDSLALNISAPNLKYLFLEGEFKEICLENTPGLVSVTVAMYMSDDVVE 233 Query: 847 HLEATTTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSXXXXXXXXXXXXXXXQVGFE 1026 H E +++CN IK G P LERL+ YF K+LS+ + QV FE Sbjct: 234 HFEQSSSCNFIKFFGGAPHLERLIGHIYFTKFLSIGNELGRHPITYHHLKNIELYQVSFE 293 Query: 1027 DVNEISVAICLLVCSPNLEELLFSASSDNEACIGP---DMDYWDKQHPIDCSFKRLQIVN 1197 D+ EI V + L++ SPNLEEL S SS+ + P D+D+W+ + P+DC+FK LQ V Sbjct: 294 DIKEILVILRLIIYSPNLEELQISGSSNTS--VSPEVLDLDFWENECPLDCAFKCLQTVK 351 Query: 1198 MTDMSGVPDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARII 1377 MTD+SG+P EM F KFLL SP+L+ MSI S Y +EG M+ ELL F R SPQA+I Sbjct: 352 MTDISGLPHEMRFIKFLLENSPILEIMSITPSVY-AIEGRMHMVTELLEFRRVSPQAKIK 410 Query: 1378 YIQD 1389 ++ D Sbjct: 411 FVLD 414 >ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis sativus] Length = 418 Score = 419 bits (1076), Expect = e-114 Identities = 214/416 (51%), Positives = 286/416 (68%), Gaps = 1/416 (0%) Frame = +1 Query: 145 DIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPVTSSSLAVT 324 D +S+LP ++IE IL LP+RDA+RTSILSR+WRY+WTT+ QLVFDD CV +++ + Sbjct: 8 DHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMSNDGIY-- 65 Query: 325 KTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLELEEKEWY 504 + F+ L LH GPI KF LS +YLQ+ PD+DQW+LFLS + ++E+ +EL + EW+ Sbjct: 66 -EDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGDGEWF 124 Query: 505 KVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLSFQQSYFENGVVESILSSCPILE 684 +V SCLF+C LT LEL+RCE+ PPPTFKGF LKSL Q +ES++S+CP+LE Sbjct: 125 RVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLISNCPLLE 184 Query: 685 SFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIADHLEATT 864 S L+YFD+L +NICAPNLKYL LEGEF+DICL+NTPLL +I +ALYM +E ++ + Sbjct: 185 SLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDE-SEPFGDLS 243 Query: 865 TCNLIKALGNVPALERLVAESYFVKYLSVKSVPSXXXXXXXXXXXXXXXQVGFEDVNEIS 1044 CN K LG VP LE+L YF KYLS+ + QV FED+NEI Sbjct: 244 DCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFEDMNEIL 303 Query: 1045 VAICLLVCSPNLEELLFSASSDNEACI-GPDMDYWDKQHPIDCSFKRLQIVNMTDMSGVP 1221 V + L+ SPNLEEL S SS+ A PD+D+W+ + P + +F +L++V TDMSGVP Sbjct: 304 VVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMSGVP 363 Query: 1222 DEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIYIQD 1389 EMEF K+LL PVL+ MSI+ Y+T + +MLIELL F RASP+A I++IQ+ Sbjct: 364 HEMEFIKYLLRNCPVLEIMSIRPCVYVT-DRRLNMLIELLKFRRASPEAEILFIQE 418 >ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis sativus] Length = 418 Score = 418 bits (1075), Expect = e-114 Identities = 214/416 (51%), Positives = 286/416 (68%), Gaps = 1/416 (0%) Frame = +1 Query: 145 DIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPVTSSSLAVT 324 D +S+LP ++IE IL LP+RDA+RTSILSR+WRY+WTT+ QLVFDD CV +++ + Sbjct: 8 DHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMSNDGIY-- 65 Query: 325 KTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLELEEKEWY 504 + F+ L LH GPI KF LS +YLQ+ PD+DQW+LFLS + ++E+ +EL + EW+ Sbjct: 66 -EDLIYFITHVLXLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGDGEWF 124 Query: 505 KVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLSFQQSYFENGVVESILSSCPILE 684 +V SCLF+C LT LEL+RCE+ PPPTFKGF LKSL Q +ES++S+CP+LE Sbjct: 125 RVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLISNCPLLE 184 Query: 685 SFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIADHLEATT 864 S L+YFD+L +NICAPNLKYL LEGEF+DICL+NTPLL +I +ALYM +E ++ + Sbjct: 185 SLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDE-SEPFGDLS 243 Query: 865 TCNLIKALGNVPALERLVAESYFVKYLSVKSVPSXXXXXXXXXXXXXXXQVGFEDVNEIS 1044 CN K LG VP LE+L YF KYLS+ + QV FED+NEI Sbjct: 244 DCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFEDMNEIL 303 Query: 1045 VAICLLVCSPNLEELLFSASSDNEACI-GPDMDYWDKQHPIDCSFKRLQIVNMTDMSGVP 1221 V + L+ SPNLEEL S SS+ A PD+D+W+ + P + +F +L++V TDMSGVP Sbjct: 304 VVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMSGVP 363 Query: 1222 DEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIYIQD 1389 EMEF K+LL PVL+ MSI+ Y+T + +MLIELL F RASP+A I++IQ+ Sbjct: 364 HEMEFIKYLLRNCPVLEIMSIRPCVYVT-DRRLNMLIELLKFRRASPEAEILFIQE 418