BLASTX nr result

ID: Coptis24_contig00005200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005200
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71242.1| 60S ribosomal protein L34B [Hevea brasiliensis]        191   2e-46
ref|XP_002522429.1| 60S ribosomal protein L34, putative [Ricinus...   191   2e-46
ref|XP_004138175.1| PREDICTED: 60S ribosomal protein L34-like [C...   190   4e-46
gb|ADR71241.1| 60S ribosomal protein L34A [Hevea brasiliensis]        190   4e-46
ref|XP_002534058.1| 60S ribosomal protein L34, putative [Ricinus...   189   5e-46

>gb|ADR71242.1| 60S ribosomal protein L34B [Hevea brasiliensis]
          Length = 120

 Score =  191 bits (485), Expect = 2e-46
 Identities = 94/95 (98%), Positives = 95/95 (100%)
 Frame = +3

Query: 144 MVQRLTYRKRHSYATKSNQNRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 323
           MVQRLTYRKRHSYATKSNQ+RVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 324 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 428
           EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95


>ref|XP_002522429.1| 60S ribosomal protein L34, putative [Ricinus communis]
           gi|223538314|gb|EEF39921.1| 60S ribosomal protein L34,
           putative [Ricinus communis]
          Length = 120

 Score =  191 bits (484), Expect = 2e-46
 Identities = 93/95 (97%), Positives = 95/95 (100%)
 Frame = +3

Query: 144 MVQRLTYRKRHSYATKSNQNRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 323
           MVQRLTYRKRHSYATKSNQ+R+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 324 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 428
           EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95


>ref|XP_004138175.1| PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus]
           gi|449477237|ref|XP_004154968.1| PREDICTED: 60S
           ribosomal protein L34-like [Cucumis sativus]
          Length = 120

 Score =  190 bits (482), Expect = 4e-46
 Identities = 93/95 (97%), Positives = 95/95 (100%)
 Frame = +3

Query: 144 MVQRLTYRKRHSYATKSNQNRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 323
           MVQRLTYRKRHSYATKSNQ+RVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 324 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 428
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAF 95


>gb|ADR71241.1| 60S ribosomal protein L34A [Hevea brasiliensis]
          Length = 120

 Score =  190 bits (482), Expect = 4e-46
 Identities = 93/95 (97%), Positives = 95/95 (100%)
 Frame = +3

Query: 144 MVQRLTYRKRHSYATKSNQNRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 323
           MVQRLTYRKRHSYATKSNQ+RVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 324 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 428
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAF 95


>ref|XP_002534058.1| 60S ribosomal protein L34, putative [Ricinus communis]
           gi|223525912|gb|EEF28324.1| 60S ribosomal protein L34,
           putative [Ricinus communis]
          Length = 120

 Score =  189 bits (481), Expect = 5e-46
 Identities = 92/95 (96%), Positives = 95/95 (100%)
 Frame = +3

Query: 144 MVQRLTYRKRHSYATKSNQNRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 323
           MVQRLTYRKRHSYATKSNQ+R+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 324 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 428
           EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95


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