BLASTX nr result

ID: Coptis24_contig00005183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005183
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525504.1| conserved hypothetical protein [Ricinus comm...   143   9e-32
ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28
emb|CBI31246.3| unnamed protein product [Vitis vinifera]              130   8e-28
ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241...   130   8e-28
ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-26

>ref|XP_002525504.1| conserved hypothetical protein [Ricinus communis]
           gi|223535183|gb|EEF36862.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  143 bits (360), Expect = 9e-32
 Identities = 79/179 (44%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
 Frame = +2

Query: 434 EQFRGN------NNELDCENGMKDDVCTIEAVEAHSDNDXXXXXXXXXXXXXXMGNDEIE 595
           E F G+       NE+  E  +K+++ T + V    DN                  D + 
Sbjct: 151 ESFEGSLSNLEGKNEMGFEESLKNEMGTGDFV----DNLSMDKDLGESNVENSSKEDNLS 206

Query: 596 PRAVADELNSGEEGKAIVVWYKLPFELLKFCIFRVSPVWTVSFAAALMGLVILKRRLSRM 775
             AV ++ + G+E K  VVW+K+PFELL++C+FR+SPVWT S AAA+MG VIL RRL +M
Sbjct: 207 VVAVVEKKSEGDEEKRKVVWWKVPFELLRYCVFRISPVWTFSMAAAVMGFVILGRRLYKM 266

Query: 776 KAKSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXXGAGVTPWPMVNLR 952
           K K+RS+P+K+TVDDKKVSQFM RA+RLNEAFS               GV  WP++ LR
Sbjct: 267 KRKTRSLPLKVTVDDKKVSQFMSRAARLNEAFSVVRRVPIVRPLLPAGGVNSWPVMTLR 325


>ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|222862813|gb|EEF00320.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  132 bits (332), Expect = 2e-28
 Identities = 62/111 (55%), Positives = 86/111 (77%), Gaps = 2/111 (1%)
 Frame = +2

Query: 626 GEEG--KAIVVWYKLPFELLKFCIFRVSPVWTVSFAAALMGLVILKRRLSRMKAKSRSIP 799
           G+EG  + +VVW+K+PFE+L++C+FR++PVW+VS AAA+MG VIL RRL +M+ K++S+ 
Sbjct: 192 GDEGEKRKVVVWWKVPFEVLRYCVFRLNPVWSVSMAAAVMGFVILGRRLYKMRRKTKSLQ 251

Query: 800 IKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXXGAGVTPWPMVNLR 952
           +K+TVDDKKVSQFM RA+RLNEAFS              AGV PWP+++LR
Sbjct: 252 LKVTVDDKKVSQFMTRATRLNEAFSVVRRVPIVRPLLPAAGVNPWPVMSLR 302


>emb|CBI31246.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  130 bits (326), Expect = 8e-28
 Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = +2

Query: 581 NDEIEPRAVADELNSGE-EGKAIVVWYKLPFELLKFCIFRVSPVWTVSFAAALMGLVILK 757
           ND     A+ +  + G+ E K  VVW+K+P E  ++C FRVSPVW+ S AAA++G+VIL 
Sbjct: 8   NDNENVGAIKEVESKGDKELKRRVVWWKVPLEFFRYCAFRVSPVWSFSVAAAILGIVILG 67

Query: 758 RRLSRMKAKSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXXGAGVTPWP 937
           RRL RMK KSRS+ +K+TVDDKKVSQFM RA+RLNEAFS              AGV PWP
Sbjct: 68  RRLYRMKRKSRSLQLKVTVDDKKVSQFMSRAARLNEAFSVVRRVPIIRPALPAAGVNPWP 127

Query: 938 MVNLR 952
           +++LR
Sbjct: 128 VMSLR 132


>ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241424 [Vitis vinifera]
          Length = 415

 Score =  130 bits (326), Expect = 8e-28
 Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = +2

Query: 581 NDEIEPRAVADELNSGE-EGKAIVVWYKLPFELLKFCIFRVSPVWTVSFAAALMGLVILK 757
           ND     A+ +  + G+ E K  VVW+K+P E  ++C FRVSPVW+ S AAA++G+VIL 
Sbjct: 291 NDNENVGAIKEVESKGDKELKRRVVWWKVPLEFFRYCAFRVSPVWSFSVAAAILGIVILG 350

Query: 758 RRLSRMKAKSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXXGAGVTPWP 937
           RRL RMK KSRS+ +K+TVDDKKVSQFM RA+RLNEAFS              AGV PWP
Sbjct: 351 RRLYRMKRKSRSLQLKVTVDDKKVSQFMSRAARLNEAFSVVRRVPIIRPALPAAGVNPWP 410

Query: 938 MVNLR 952
           +++LR
Sbjct: 411 VMSLR 415


>ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|222835675|gb|EEE74110.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  124 bits (310), Expect = 6e-26
 Identities = 62/117 (52%), Positives = 81/117 (69%)
 Frame = +2

Query: 602 AVADELNSGEEGKAIVVWYKLPFELLKFCIFRVSPVWTVSFAAALMGLVILKRRLSRMKA 781
           AV +     E  K  VV +K+PFE+L++C+FR SPVW+VS AAA+MG VIL RRL +MK 
Sbjct: 174 AVGETKPGDEVEKRKVVLWKVPFEMLRYCVFRFSPVWSVSVAAAVMGFVILGRRLYKMKR 233

Query: 782 KSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXXGAGVTPWPMVNLR 952
           K++S+ +K+TVDDKKVS FM RA+RLNE FS              AGV PWP+++LR
Sbjct: 234 KTKSLQLKVTVDDKKVSHFMSRAARLNETFSVVRRVPIVRPLLPAAGVNPWPVMSLR 290


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