BLASTX nr result

ID: Coptis24_contig00005172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005172
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   123   2e-26
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...   121   7e-26
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   119   3e-25
emb|CBI39701.3| unnamed protein product [Vitis vinifera]              119   3e-25
emb|CBI39703.3| unnamed protein product [Vitis vinifera]              118   6e-25

>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
 Frame = +3

Query: 168 LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNNETV---KSRPFYHRPTYLSCVVLSLF 338
           LL P+F+  F               + CK+ +        ++R  Y++ T+  C  LSL 
Sbjct: 10  LLNPVFLRAFSASLHLVLLLLLFVSWVCKRINGGALENYKRTRFLYYKQTFACCQGLSLL 69

Query: 339 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFPVFLRI 506
           +  LC LNYFYWY NGWS E +V  LDLVLRT++W  +SV L+     S + KFP  LR+
Sbjct: 70  NFFLCFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGAVSVYLHTQFHGSVEPKFPFLLRV 129

Query: 507 WWGFFFLLSCYCLVADLV 560
           WWGF+F +SCYCLV D+V
Sbjct: 130 WWGFYFSISCYCLVIDIV 147


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score =  121 bits (304), Expect = 7e-26
 Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
 Frame = +3

Query: 168 LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN---ETVKSRPFYHRPTYLSCVVLSLF 338
           LL P+F+  F               + CK+ +        ++R  Y++ T+  C  LSL 
Sbjct: 10  LLNPVFLRAFSASLHLVLLLLLFVSWVCKRINGGALENCKRTRFLYYKQTFACCQGLSLL 69

Query: 339 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFPVFLRI 506
           +  LC LNYFYWY NGWS E +V  LDLVLRT++W  + V L+     S + KFP  LR+
Sbjct: 70  NFFLCFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGAVCVYLHTQFHGSVEPKFPFLLRV 129

Query: 507 WWGFFFLLSCYCLVADLV 560
           WWGF+F +SCYCLV D+V
Sbjct: 130 WWGFYFSISCYCLVIDIV 147



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
 Frame = +3

Query: 381  NGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFPVFLRIWWGFFFLLSCYCLV 548
            NGWSDE +V  LDLVLRT+ W  + V L+     S + KFP  LR+WWGF+F +SCYCLV
Sbjct: 1029 NGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFPFLLRVWWGFYFSISCYCLV 1088

Query: 549  ADLV 560
             D+V
Sbjct: 1089 LDIV 1092


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  119 bits (299), Expect = 3e-25
 Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
 Frame = +3

Query: 168 LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN---ETVKSRPFYHRPTYLSCVVLSLF 338
           LL P+F+  F               + CK+          ++R  Y++ T+  C  LSL 
Sbjct: 10  LLNPVFLRVFSASLHLVLLLLLFVSWVCKRIKGGAPENCKRTRFLYYKQTFACCQGLSLL 69

Query: 339 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFPVFLRI 506
           +L+LC LNYFYWY NGWSDE +V  LDLVLRT+ W  + V L+     S + KFP  LR+
Sbjct: 70  NLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFPFLLRV 129

Query: 507 WWGFFFLLSCYCLVADLV 560
           WWGF+F +SCY LV D+V
Sbjct: 130 WWGFYFSISCYFLVLDIV 147


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score =  119 bits (299), Expect = 3e-25
 Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
 Frame = +3

Query: 168 LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN---ETVKSRPFYHRPTYLSCVVLSLF 338
           LL P+F+  F               + CK+          ++R  Y++ T+  C  LSL 
Sbjct: 16  LLNPVFLRVFSASLHLVLLLLLFVSWVCKRIKGGAPENCKRTRFLYYKQTFACCQGLSLL 75

Query: 339 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFPVFLRI 506
           +L+LC LNYFYWY NGWSDE +V  LDLVLRT+ W  + V L+     S + KFP  LR+
Sbjct: 76  NLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFPFLLRV 135

Query: 507 WWGFFFLLSCYCLVADLV 560
           WWGF+F +SCY LV D+V
Sbjct: 136 WWGFYFSISCYFLVLDIV 153


>emb|CBI39703.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  118 bits (296), Expect = 6e-25
 Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
 Frame = +3

Query: 168 LLKPIFIHGFXXXXXXXXXXXXXXXYACKKRDNN--ETVKS-RPFYHRPTYLSCVVLSLF 338
           LL PIF+  F               + CK+   +  E  KS R   ++ T+     LSL 
Sbjct: 16  LLNPIFLRAFSASLHLVLLLLLFVSWVCKRIKGSALENCKSTRSLSYKQTFACSQGLSLL 75

Query: 339 HLVLCILNYFYWYTNGWSDESIVNQLDLVLRTVTWVGISVLLNY----SSDRKFPVFLRI 506
           +  LC LNYFYWY NGWSDE +V  LDLVLRT+ W  + V L+     S + KFP  LR+
Sbjct: 76  NFFLCFLNYFYWYRNGWSDEKLVTLLDLVLRTLAWGAVCVYLHTQFHGSVEPKFPFLLRV 135

Query: 507 WWGFFFLLSCYCLVADLV 560
           WWGF+F +SCYCLV D+V
Sbjct: 136 WWGFYFSISCYCLVIDIV 153


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