BLASTX nr result
ID: Coptis24_contig00005168
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005168
(1851 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269574.1| PREDICTED: uncharacterized protein LOC100250... 471 e-130
ref|XP_004169289.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 456 e-126
ref|XP_004151859.1| PREDICTED: zinc finger with UFM1-specific pe... 456 e-125
emb|CBI23122.3| unnamed protein product [Vitis vinifera] 446 e-123
ref|XP_002317855.1| predicted protein [Populus trichocarpa] gi|2... 432 e-118
>ref|XP_002269574.1| PREDICTED: uncharacterized protein LOC100250322 [Vitis vinifera]
Length = 446
Score = 471 bits (1211), Expect = e-130
Identities = 255/469 (54%), Positives = 314/469 (66%), Gaps = 15/469 (3%)
Frame = -3
Query: 1657 CPFCDQLFPISELEW-----------HANTHLVEQECDWDLELAHQIALAPTSPPTNLDI 1511
CPFC FP S+L+ HAN HL E+E D+E A +IA+APTSPP L+
Sbjct: 6 CPFCRLTFPASQLQRLITENESCGCRHANDHLEEEELRRDMEFAQEIAIAPTSPPKTLN- 64
Query: 1510 ERNDADDSELFRTRGSGTLSNVSA----STNDIGEANILEQISGLFHFQGRSTFCKVEGG 1343
N + LF T T S+ S+N GE +I E++ L Q RSTF +VE G
Sbjct: 65 --NPVEHGMLFETSSRKTYERSSSRSDESSNCSGEMSIDEKVFHLARLQIRSTFYRVEDG 122
Query: 1342 LMPLLRRCLQSESGNVTSIITDHVDHFQSLKSEDAGFGCGWRNIQMLSSHLLTQRPEARD 1163
LM LLR CL+SE GN T I++ V HFQS++SED G+GCGWRNIQMLSSHL+ QR EAR
Sbjct: 123 LMALLRNCLESELGNSTCILSGSVIHFQSIESEDVGWGCGWRNIQMLSSHLVMQRQEARQ 182
Query: 1162 VIFGGSGYVPDIPSLQRWLEIGWERNFDLLGSYSFKNKVYGSRKWIGTTECATLFRSFGL 983
V+FGGSG++PDIPSLQRWLEI WER+FD +GS F +K+YG+ WIGTTECA LFRSFGL
Sbjct: 183 VLFGGSGFIPDIPSLQRWLEIAWERDFDTVGSEHFNHKIYGTTNWIGTTECAALFRSFGL 242
Query: 982 RARIVDFGSKCNESFSSVDGTNTAKKAAGTYGRGKRQTEKVFGPMDKFLSNRDIPRADSI 803
RARIVDFG K E S N+ RGKR+ ++V GP+DKFL R+ PR I
Sbjct: 243 RARIVDFGPK--EIKSPYPQKNS---------RGKRKADEVCGPIDKFLLRRE-PRDQDI 290
Query: 802 EQGKSKHFDMHRVGAFGASTHRNNGRSDPDLLNQSMPTKVGRHQLLMEWVWNYFTDNRFS 623
Q G+S H + +D ++ Q+L++WVWNYF+DN+F+
Sbjct: 291 SQP-------------GSSRHDSCNLADSTESDKCFTRNDKGRQVLVDWVWNYFSDNKFA 337
Query: 622 SSGNPQRVIVSEKTPLYFQHDGHSRTIVGIQVRRQHGMLEQYTLLILDPGHRTEALERSL 443
SG+ VIV++K PLYFQHDGHSRTIVGIQV+ Q + QY LLILDP H+T ALERSL
Sbjct: 338 KSGS-NDVIVTDKAPLYFQHDGHSRTIVGIQVKHQLNGMHQYNLLILDPTHKTAALERSL 396
Query: 442 RENVGWQRFIKRGVHTLKKPQYQLCYVDTGIAHGEEMERLKTLDSIYFE 296
+ENVGWQ+FIKRGVHTLKK QYQLC++D GIAH EE+E+LKTLDSI+ E
Sbjct: 397 KENVGWQKFIKRGVHTLKKLQYQLCHIDPGIAHAEELEQLKTLDSIFLE 445
>ref|XP_004169289.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger with UFM1-specific
peptidase domain protein-like [Cucumis sativus]
Length = 450
Score = 456 bits (1173), Expect = e-126
Identities = 234/466 (50%), Positives = 312/466 (66%), Gaps = 12/466 (2%)
Frame = -3
Query: 1657 CPFCDQLFPISELEWHANTHLVEQECD-------WDLELAHQIALAPTSPPTNLDIERND 1499
CPFCDQ+ P EL+ HAN H ++E D D ELA Q+A + TS D + ++
Sbjct: 6 CPFCDQVVPSDELQRHANGHFEDEENDNKQRQLAMDFELAQQMAFSSTS----YDNDNDN 61
Query: 1498 ADDSELFRTRGSGTLSNVS--ASTNDIGEANILEQISGLFHFQGRSTFCKVEGGLMPLLR 1325
D + + GS + + +S + T+ +GE N+ E++S L Q R F KVEGGLM LL+
Sbjct: 62 GDMPQEIKCEGSLSSNKLSCESGTSVMGELNVNEKVSCLIGSQNRGAFXKVEGGLMSLLK 121
Query: 1324 RCLQSESGNVTSIITDHVDHFQSLKSEDAGFGCGWRNIQMLSSHLLTQRPEARDVIFGGS 1145
CL+ ES + TSI++ +VDH+QS++ ED G+GCGWRNIQML SHLL QRPE R+++FGGS
Sbjct: 122 NCLELESHDSTSILSGYVDHYQSIEFEDFGWGCGWRNIQMLCSHLLMQRPETRNILFGGS 181
Query: 1144 GYVPDIPSLQRWLEIGWERNFDLLGSYSFKNKVYGSRKWIGTTECATLFRSFGLRARIVD 965
G VPDIPSLQRWLE+ WER FD+ G+ F K+YG + WIGTTECA L RSFGL+ARI+D
Sbjct: 182 GVVPDIPSLQRWLEVAWERGFDVHGAEHFNYKIYGKKNWIGTTECAALLRSFGLQARIID 241
Query: 964 FGSK-CNESFSSVDGTNTAKKAAGTYGRGKRQTEKVFGPMDKFL--SNRDIPRADSIEQG 794
FG K C E + SV G+++ + KR+T KV GPMD++L +N P+ S
Sbjct: 242 FGPKECEELYLSVPGSSSGAQMENLIDANKRKTIKVCGPMDRYLVRTNDSDPQTGSSGHE 301
Query: 793 KSKHFDMHRVGAFGASTHRNNGRSDPDLLNQSMPTKVGRHQLLMEWVWNYFTDNRFSSSG 614
S +F + + ++ P K HQ+L++WVWNYF+D R +
Sbjct: 302 NSVYFKISQ-----------------NVTKNKSPKKAKGHQVLVDWVWNYFSDGRICTYD 344
Query: 613 NPQRVIVSEKTPLYFQHDGHSRTIVGIQVRRQHGMLEQYTLLILDPGHRTEALERSLREN 434
+ QRV +SEKTPL+FQHDGHSRTIVGIQV+++ ++QY LLILDP H T LER+LREN
Sbjct: 345 H-QRVNISEKTPLFFQHDGHSRTIVGIQVKQKCNGMQQYNLLILDPAHNTRGLERALREN 403
Query: 433 VGWQRFIKRGVHTLKKPQYQLCYVDTGIAHGEEMERLKTLDSIYFE 296
+GWQ+ IKRG+HTL KPQYQLCY+D+GIA G ++E LKT+DSI+ E
Sbjct: 404 IGWQQLIKRGIHTLNKPQYQLCYIDSGIAAGVDVELLKTIDSIFLE 449
>ref|XP_004151859.1| PREDICTED: zinc finger with UFM1-specific peptidase domain
protein-like [Cucumis sativus]
Length = 450
Score = 456 bits (1172), Expect = e-125
Identities = 234/466 (50%), Positives = 312/466 (66%), Gaps = 12/466 (2%)
Frame = -3
Query: 1657 CPFCDQLFPISELEWHANTHLVEQECD-------WDLELAHQIALAPTSPPTNLDIERND 1499
CPFCDQ+ P EL+ HAN H ++E D D ELA Q+A + TS D + ++
Sbjct: 6 CPFCDQVVPSDELQRHANGHFEDEENDNKQRQLAMDFELAQQMAFSSTS----YDNDNDN 61
Query: 1498 ADDSELFRTRGSGTLSNVS--ASTNDIGEANILEQISGLFHFQGRSTFCKVEGGLMPLLR 1325
D + + GS + + +S + T+ +GE N+ E++S L Q R F KVEGGLM LL+
Sbjct: 62 GDMPQEIKCEGSLSSNKLSCESGTSVMGELNVNEKVSCLIGSQNRGAFYKVEGGLMSLLK 121
Query: 1324 RCLQSESGNVTSIITDHVDHFQSLKSEDAGFGCGWRNIQMLSSHLLTQRPEARDVIFGGS 1145
CL+ ES + TSI++ +VDH+QS++ ED G+GCGWRNIQML SHLL QRPE R+++FGGS
Sbjct: 122 NCLELESHDSTSILSGYVDHYQSIEFEDFGWGCGWRNIQMLCSHLLMQRPETRNILFGGS 181
Query: 1144 GYVPDIPSLQRWLEIGWERNFDLLGSYSFKNKVYGSRKWIGTTECATLFRSFGLRARIVD 965
G VPDIPSLQRWLE+ WER FD+ G+ F K+YG + WIGTTECA L RSFGL+ARI+D
Sbjct: 182 GVVPDIPSLQRWLEVAWERGFDVHGAEHFNYKIYGKKNWIGTTECAALLRSFGLQARIID 241
Query: 964 FGSK-CNESFSSVDGTNTAKKAAGTYGRGKRQTEKVFGPMDKFL--SNRDIPRADSIEQG 794
FG K C E + SV G+++ + KR+T KV GPMD++L +N P+ S
Sbjct: 242 FGPKECEELYLSVPGSSSGAQMENLIDANKRKTIKVCGPMDRYLVRTNDSDPQTGSSGHE 301
Query: 793 KSKHFDMHRVGAFGASTHRNNGRSDPDLLNQSMPTKVGRHQLLMEWVWNYFTDNRFSSSG 614
S +F + + ++ P K HQ+L++WVWNYF+D R +
Sbjct: 302 NSVYFKISQ-----------------NVTKNKSPKKAKGHQVLVDWVWNYFSDGRICTYD 344
Query: 613 NPQRVIVSEKTPLYFQHDGHSRTIVGIQVRRQHGMLEQYTLLILDPGHRTEALERSLREN 434
+ QRV +SEKTPL+FQHDGHSRTIVGIQV+++ ++QY LLILDP H T LER+LREN
Sbjct: 345 H-QRVNISEKTPLFFQHDGHSRTIVGIQVKQKCNGMQQYNLLILDPAHNTRGLERALREN 403
Query: 433 VGWQRFIKRGVHTLKKPQYQLCYVDTGIAHGEEMERLKTLDSIYFE 296
+GWQ+ IKRG+HTL KPQYQLCY+D+GIA G ++E LKT+DSI+ E
Sbjct: 404 IGWQQLIKRGIHTLNKPQYQLCYIDSGIAAGVDVELLKTIDSIFLE 449
>emb|CBI23122.3| unnamed protein product [Vitis vinifera]
Length = 404
Score = 446 bits (1148), Expect = e-123
Identities = 243/458 (53%), Positives = 296/458 (64%), Gaps = 4/458 (0%)
Frame = -3
Query: 1657 CPFCDQLFPISELEWHANTHLVEQECDWDLELAHQIALAPTSPPTNLDIERNDADDSELF 1478
CPFC FP S+L+ HAN HL E+E D+E A +IA+APTSPP L+ N + LF
Sbjct: 6 CPFCRLTFPASQLQRHANDHLEEEELRRDMEFAQEIAIAPTSPPKTLN---NPVEHGMLF 62
Query: 1477 RTRGSGTLSNVSA----STNDIGEANILEQISGLFHFQGRSTFCKVEGGLMPLLRRCLQS 1310
T T S+ S+N GE +I E++ L Q RSTF +VE GLM LLR CL+S
Sbjct: 63 ETSSRKTYERSSSRSDESSNCSGEMSIDEKVFHLARLQIRSTFYRVEDGLMALLRNCLES 122
Query: 1309 ESGNVTSIITDHVDHFQSLKSEDAGFGCGWRNIQMLSSHLLTQRPEARDVIFGGSGYVPD 1130
E GN T I++ V HFQS++SED G+GCGWRNIQMLSSHL+ QR EAR V+FGGSG++PD
Sbjct: 123 ELGNSTCILSGSVIHFQSIESEDVGWGCGWRNIQMLSSHLVMQRQEARQVLFGGSGFIPD 182
Query: 1129 IPSLQRWLEIGWERNFDLLGSYSFKNKVYGSRKWIGTTECATLFRSFGLRARIVDFGSKC 950
IPSLQRWLEI WER+FD +GS F +K+YG+ WIGTTECA LFRSFGLRARIVDFG K
Sbjct: 183 IPSLQRWLEIAWERDFDTVGSEHFNHKIYGTTNWIGTTECAALFRSFGLRARIVDFGPK- 241
Query: 949 NESFSSVDGTNTAKKAAGTYGRGKRQTEKVFGPMDKFLSNRDIPRADSIEQGKSKHFDMH 770
E S N++ + + ADS E K
Sbjct: 242 -EIKSPYPQKNSSSR------------------------HDSCNLADSTESDK------- 269
Query: 769 RVGAFGASTHRNNGRSDPDLLNQSMPTKVGRHQLLMEWVWNYFTDNRFSSSGNPQRVIVS 590
T + GR Q+L++WVWNYF+DN+F+ SG+ VIV+
Sbjct: 270 ------CFTRNDKGR-----------------QVLVDWVWNYFSDNKFAKSGS-NDVIVT 305
Query: 589 EKTPLYFQHDGHSRTIVGIQVRRQHGMLEQYTLLILDPGHRTEALERSLRENVGWQRFIK 410
+K PLYFQHDGHSRTIVGIQV+ Q + QY LLILDP H+T ALERSL+ENVGWQ+FIK
Sbjct: 306 DKAPLYFQHDGHSRTIVGIQVKHQLNGMHQYNLLILDPTHKTAALERSLKENVGWQKFIK 365
Query: 409 RGVHTLKKPQYQLCYVDTGIAHGEEMERLKTLDSIYFE 296
RGVHTLKK QYQLC++D GIAH EE+E+LKTLDSI+ E
Sbjct: 366 RGVHTLKKLQYQLCHIDPGIAHAEELEQLKTLDSIFLE 403
>ref|XP_002317855.1| predicted protein [Populus trichocarpa] gi|222858528|gb|EEE96075.1|
predicted protein [Populus trichocarpa]
Length = 433
Score = 432 bits (1112), Expect = e-118
Identities = 233/468 (49%), Positives = 302/468 (64%), Gaps = 14/468 (2%)
Frame = -3
Query: 1657 CPFCDQLFPISELEWHANTHLVE--------QECDWDLELAHQIALAPTSPPTNLDIERN 1502
CPFC P S+L+ HAN+H E ++ DLELA Q+++ P P + I+ N
Sbjct: 7 CPFCHLTLPPSQLQRHANSHFDEDDGVAEKDEQLARDLELAQQLSIPP--PSSTFTIQEN 64
Query: 1501 DADDSELFRTRGSGTLSNVSASTNDIGEANILEQISGLFHFQGRSTFCKVE--GGLMPLL 1328
+ D E+IS L Q RS+F V+ GGL+ LL
Sbjct: 65 NTMD----------------------------EKISCLIALQYRSSFYHVKSPGGLISLL 96
Query: 1327 RRCLQSESG-NVTSIITDHVDHFQSLKSEDAGFGCGWRNIQMLSSHLLTQRPEARDVIFG 1151
C + ++ N T +++ +VDHFQSL SEDAG+GCGWRNIQMLSSHLL+ R +A +++FG
Sbjct: 97 SNCFELDADTNTTVLLSGYVDHFQSLASEDAGWGCGWRNIQMLSSHLLSHRHDASELLFG 156
Query: 1150 GSGYVPDIPSLQRWLEIGWERNFDLLGSYSFKNKVYGSRKWIGTTECATLFRSFGLRARI 971
GSG+VPDIP LQRWLEI WE+ FD LGS+ F N VYGS+ WIGTTECA +FRSFGLRARI
Sbjct: 157 GSGFVPDIPFLQRWLEIAWEKGFDALGSHHFNNSVYGSKHWIGTTECAAIFRSFGLRARI 216
Query: 970 VDFGSKCNESFS-SVDGTNTAKKAAGTYGRGKRQTEKVFGPMDKFL--SNRDIPRADSIE 800
VDFG K +SF SV GT+ KR+ +V+GPMD++L N D+ + DSI
Sbjct: 217 VDFGPKELQSFFLSVPGTSLTPPVVTANASDKRKAFQVYGPMDRYLVGRNSDVSQLDSIV 276
Query: 799 QGKSKHFDMHRVGAFGASTHRNNGRSDPDLLNQSMPTKVGRHQLLMEWVWNYFTDNRFSS 620
+S+ +ST+ G SD + N+ P K HQ+L++WVWNYF++ ++
Sbjct: 277 NDQSQ-----------SSTNYVAGGSDHSMANR-FPRKKEGHQVLLDWVWNYFSEESLTT 324
Query: 619 SGNPQRVIVSEKTPLYFQHDGHSRTIVGIQVRRQHGMLEQYTLLILDPGHRTEALERSLR 440
S ++V+++ + PLYFQHDGHSRTIVGIQ RRQ + QY LLILDP HRT ALERSLR
Sbjct: 325 SVQNRQVVITNRVPLYFQHDGHSRTIVGIQFRRQQNGVPQYNLLILDPAHRTVALERSLR 384
Query: 439 ENVGWQRFIKRGVHTLKKPQYQLCYVDTGIAHGEEMERLKTLDSIYFE 296
EN GW++ IKRG HTLKKPQYQLCY+D GIA GEEME+LK +DS++ E
Sbjct: 385 ENAGWKKLIKRGAHTLKKPQYQLCYIDPGIAIGEEMEQLKKIDSVFIE 432