BLASTX nr result
ID: Coptis24_contig00005167
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005167 (2556 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA hom... 578 e-162 ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA hom... 578 e-162 ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA hom... 574 e-161 ref|XP_004144599.1| PREDICTED: GTP-binding protein TypA/BipA hom... 571 e-160 ref|XP_002525152.1| GTP-binding protein typa/bipa, putative [Ric... 565 e-158 >ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 2 [Vitis vinifera] Length = 684 Score = 578 bits (1489), Expect = e-162 Identities = 313/447 (70%), Positives = 337/447 (75%), Gaps = 15/447 (3%) Frame = +2 Query: 1259 VSEERCDEVESLVFDLFANLGATGADSND*SGFLSFETEEQLDFPVLYAS---------- 1408 V+EERCDEVESLVFDLFANLGAT EEQLDFPVLYAS Sbjct: 202 VTEERCDEVESLVFDLFANLGAT---------------EEQLDFPVLYASAKEGWASSTF 246 Query: 1409 -----DTARNMSPLLDAIVNHVPPPTADIDAPFQMLVSMMERDFYLGRILTGRISSGIIR 1573 D ++MS LLDAI+ HVPPPTA +DAPFQMLVSMME+DFYLGRILTGR+SSG+IR Sbjct: 247 TKSPPDNTKSMSELLDAIIRHVPPPTASLDAPFQMLVSMMEKDFYLGRILTGRVSSGVIR 306 Query: 1574 VGDRVHGLRHKGSGVEKIEEGKVIKLMKKKGTSMVLIESAGAGDIISMAGLSNPSIGHTV 1753 VGDRVHGLR SGVEKIEEGKV+KLMKKKGT+MVLI+SAGAGDIISMAGL++PSIGHTV Sbjct: 307 VGDRVHGLRSTDSGVEKIEEGKVLKLMKKKGTNMVLIDSAGAGDIISMAGLTSPSIGHTV 366 Query: 1754 SNVEVMTALPIVELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 1933 +NVEVMTALP VELDPPTISMTF VNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL Sbjct: 367 ANVEVMTALPTVELDPPTISMTFSVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 426 Query: 1934 PAMSDTYEVQGRGELQLGILIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2113 P +S++YEVQGRGELQLGILIE Sbjct: 427 PGLSESYEVQGRGELQLGILIE------------------------------------NM 450 Query: 2114 XXXXFELSVSPPKVMYKLEKGQKLXXXXXXXXXXXXXXXGLVMEALSHRRAEVLDMGPVP 2293 FELSVSPPKVMYK EKG K GLVMEALSHRRAEV+DMGPV Sbjct: 451 RREGFELSVSPPKVMYKTEKGVKFEPLEEVTIEVNEEHVGLVMEALSHRRAEVVDMGPVA 510 Query: 2294 GDIGRTRMSLNCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYAKHCGPLGNVRKGVLVSVG 2473 G GRTR+S+ CPSRGLVGYRSVFSSDTRGTGFMHRAFL YAK GPLGNVRKGVLVS+G Sbjct: 511 GSEGRTRISMTCPSRGLVGYRSVFSSDTRGTGFMHRAFLTYAKFRGPLGNVRKGVLVSMG 570 Query: 2474 YGAITAHALVSLEARGTLFVSPGMETY 2554 +G ITA+ALVSLE RGTLFV+PGMETY Sbjct: 571 HGTITAYALVSLEPRGTLFVTPGMETY 597 >ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis vinifera] gi|302143376|emb|CBI21937.3| unnamed protein product [Vitis vinifera] Length = 672 Score = 578 bits (1489), Expect = e-162 Identities = 313/447 (70%), Positives = 337/447 (75%), Gaps = 15/447 (3%) Frame = +2 Query: 1259 VSEERCDEVESLVFDLFANLGATGADSND*SGFLSFETEEQLDFPVLYAS---------- 1408 V+EERCDEVESLVFDLFANLGAT EEQLDFPVLYAS Sbjct: 190 VTEERCDEVESLVFDLFANLGAT---------------EEQLDFPVLYASAKEGWASSTF 234 Query: 1409 -----DTARNMSPLLDAIVNHVPPPTADIDAPFQMLVSMMERDFYLGRILTGRISSGIIR 1573 D ++MS LLDAI+ HVPPPTA +DAPFQMLVSMME+DFYLGRILTGR+SSG+IR Sbjct: 235 TKSPPDNTKSMSELLDAIIRHVPPPTASLDAPFQMLVSMMEKDFYLGRILTGRVSSGVIR 294 Query: 1574 VGDRVHGLRHKGSGVEKIEEGKVIKLMKKKGTSMVLIESAGAGDIISMAGLSNPSIGHTV 1753 VGDRVHGLR SGVEKIEEGKV+KLMKKKGT+MVLI+SAGAGDIISMAGL++PSIGHTV Sbjct: 295 VGDRVHGLRSTDSGVEKIEEGKVLKLMKKKGTNMVLIDSAGAGDIISMAGLTSPSIGHTV 354 Query: 1754 SNVEVMTALPIVELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 1933 +NVEVMTALP VELDPPTISMTF VNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL Sbjct: 355 ANVEVMTALPTVELDPPTISMTFSVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 414 Query: 1934 PAMSDTYEVQGRGELQLGILIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2113 P +S++YEVQGRGELQLGILIE Sbjct: 415 PGLSESYEVQGRGELQLGILIE------------------------------------NM 438 Query: 2114 XXXXFELSVSPPKVMYKLEKGQKLXXXXXXXXXXXXXXXGLVMEALSHRRAEVLDMGPVP 2293 FELSVSPPKVMYK EKG K GLVMEALSHRRAEV+DMGPV Sbjct: 439 RREGFELSVSPPKVMYKTEKGVKFEPLEEVTIEVNEEHVGLVMEALSHRRAEVVDMGPVA 498 Query: 2294 GDIGRTRMSLNCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYAKHCGPLGNVRKGVLVSVG 2473 G GRTR+S+ CPSRGLVGYRSVFSSDTRGTGFMHRAFL YAK GPLGNVRKGVLVS+G Sbjct: 499 GSEGRTRISMTCPSRGLVGYRSVFSSDTRGTGFMHRAFLTYAKFRGPLGNVRKGVLVSMG 558 Query: 2474 YGAITAHALVSLEARGTLFVSPGMETY 2554 +G ITA+ALVSLE RGTLFV+PGMETY Sbjct: 559 HGTITAYALVSLEPRGTLFVTPGMETY 585 >ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Cucumis sativus] Length = 676 Score = 574 bits (1479), Expect = e-161 Identities = 307/447 (68%), Positives = 332/447 (74%), Gaps = 15/447 (3%) Frame = +2 Query: 1259 VSEERCDEVESLVFDLFANLGATGADSND*SGFLSFETEEQLDFPVLYAS---------- 1408 VSEERC EVESLVFDLFANLGAT EEQLDFPVLYAS Sbjct: 194 VSEERCSEVESLVFDLFANLGAT---------------EEQLDFPVLYASAKEGWASNTY 238 Query: 1409 -----DTARNMSPLLDAIVNHVPPPTADIDAPFQMLVSMMERDFYLGRILTGRISSGIIR 1573 RNMS LLDAI+ HVPPP A +D PFQMLVSMMERDFYLGRILTGRI+SG++R Sbjct: 239 TKDPPGELRNMSQLLDAIIRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIASGVVR 298 Query: 1574 VGDRVHGLRHKGSGVEKIEEGKVIKLMKKKGTSMVLIESAGAGDIISMAGLSNPSIGHTV 1753 GDRVHGLR K SGVEKIEEGKV+KLMKKKGT++V I+SAGAGDI+SMAGL+NPSIGHTV Sbjct: 299 TGDRVHGLRVKDSGVEKIEEGKVVKLMKKKGTTVVQIDSAGAGDIVSMAGLANPSIGHTV 358 Query: 1754 SNVEVMTALPIVELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 1933 +NVEV+ ALP ELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL Sbjct: 359 ANVEVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 418 Query: 1934 PAMSDTYEVQGRGELQLGILIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2113 P +S++YEVQGRGELQLGILIE Sbjct: 419 PGLSESYEVQGRGELQLGILIE------------------------------------NM 442 Query: 2114 XXXXFELSVSPPKVMYKLEKGQKLXXXXXXXXXXXXXXXGLVMEALSHRRAEVLDMGPVP 2293 FELS+SPPKVMYK E KL GLVMEALSHRR EV +MGPVP Sbjct: 443 RREGFELSISPPKVMYKTENSTKLEPIEEVTIEVNEEHVGLVMEALSHRRGEVTEMGPVP 502 Query: 2294 GDIGRTRMSLNCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYAKHCGPLGNVRKGVLVSVG 2473 G+IGRTR+ L CPSRGLVGYRSVFSSDTRGTGFMHRAFLKY KH GPLGNVRKGVL+S+G Sbjct: 503 GNIGRTRLCLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYEKHRGPLGNVRKGVLISMG 562 Query: 2474 YGAITAHALVSLEARGTLFVSPGMETY 2554 YGA+TAHAL+SLEARGTLFV+PGME Y Sbjct: 563 YGAVTAHALMSLEARGTLFVNPGMEAY 589 >ref|XP_004144599.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Cucumis sativus] Length = 614 Score = 571 bits (1472), Expect = e-160 Identities = 306/445 (68%), Positives = 331/445 (74%), Gaps = 15/445 (3%) Frame = +2 Query: 1259 VSEERCDEVESLVFDLFANLGATGADSND*SGFLSFETEEQLDFPVLYAS---------- 1408 VSEERC EVESLVFDLFANLGAT EEQLDFPVLYAS Sbjct: 194 VSEERCSEVESLVFDLFANLGAT---------------EEQLDFPVLYASAKEGWASNTY 238 Query: 1409 -----DTARNMSPLLDAIVNHVPPPTADIDAPFQMLVSMMERDFYLGRILTGRISSGIIR 1573 RNMS LLDAI+ HVPPP A +D PFQMLVSMMERDFYLGRILTGRI+SG++R Sbjct: 239 TKDPPGELRNMSQLLDAIIRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIASGVVR 298 Query: 1574 VGDRVHGLRHKGSGVEKIEEGKVIKLMKKKGTSMVLIESAGAGDIISMAGLSNPSIGHTV 1753 GDRVHGLR K SGVEKIEEGKV+KLMKKKGT++V I+SAGAGDI+SMAGL+NPSIGHTV Sbjct: 299 TGDRVHGLRVKDSGVEKIEEGKVVKLMKKKGTTVVQIDSAGAGDIVSMAGLANPSIGHTV 358 Query: 1754 SNVEVMTALPIVELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 1933 +NVEV+ ALP ELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL Sbjct: 359 ANVEVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 418 Query: 1934 PAMSDTYEVQGRGELQLGILIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2113 P +S++YEVQGRGELQLGILIE Sbjct: 419 PGLSESYEVQGRGELQLGILIE------------------------------------NM 442 Query: 2114 XXXXFELSVSPPKVMYKLEKGQKLXXXXXXXXXXXXXXXGLVMEALSHRRAEVLDMGPVP 2293 FELS+SPPKVMYK E KL GLVMEALSHRR EV +MGPVP Sbjct: 443 RREGFELSISPPKVMYKTENSTKLEPIEEVTIEVNEEHVGLVMEALSHRRGEVTEMGPVP 502 Query: 2294 GDIGRTRMSLNCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYAKHCGPLGNVRKGVLVSVG 2473 G+IGRTR+ L CPSRGLVGYRSVFSSDTRGTGFMHRAFLKY KH GPLGNVRKGVL+S+G Sbjct: 503 GNIGRTRLCLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYEKHRGPLGNVRKGVLISMG 562 Query: 2474 YGAITAHALVSLEARGTLFVSPGME 2548 YGA+TAHAL+SLEARGTLFV+PGME Sbjct: 563 YGAVTAHALMSLEARGTLFVNPGME 587 >ref|XP_002525152.1| GTP-binding protein typa/bipa, putative [Ricinus communis] gi|223535611|gb|EEF37279.1| GTP-binding protein typa/bipa, putative [Ricinus communis] Length = 661 Score = 565 bits (1457), Expect = e-158 Identities = 303/447 (67%), Positives = 334/447 (74%), Gaps = 15/447 (3%) Frame = +2 Query: 1259 VSEERCDEVESLVFDLFANLGATGADSND*SGFLSFETEEQLDFPVLYASDT-------- 1414 VSEE C+EVESLVFDLFANLGAT EEQLDFPVLYAS Sbjct: 179 VSEEMCNEVESLVFDLFANLGAT---------------EEQLDFPVLYASAKEGWASSTF 223 Query: 1415 -------ARNMSPLLDAIVNHVPPPTADIDAPFQMLVSMMERDFYLGRILTGRISSGIIR 1573 A++MS LLD IV HVP P A +DAPFQMLVSMMERDFYLGRILTGRI++G+IR Sbjct: 224 TKDPPADAKDMSQLLDTIVRHVPSPKASLDAPFQMLVSMMERDFYLGRILTGRIAAGVIR 283 Query: 1574 VGDRVHGLRHKGSGVEKIEEGKVIKLMKKKGTSMVLIESAGAGDIISMAGLSNPSIGHTV 1753 VGDR+HGLR SGV+KIEEGKV+KLMKKKGTSMV I+SAGAGDI+S+AG+++PSIGHT+ Sbjct: 284 VGDRIHGLRSTDSGVQKIEEGKVLKLMKKKGTSMVHIDSAGAGDIVSVAGMTSPSIGHTI 343 Query: 1754 SNVEVMTALPIVELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 1933 +NVEVM ALP VELDPPTISMTFGVNDSPLAGRDGTHLTGG+IGDRL AEAETNLAINV+ Sbjct: 344 ANVEVMNALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLAAEAETNLAINVI 403 Query: 1934 PAMSDTYEVQGRGELQLGILIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2113 P ++++YEVQGRGELQLGILIE Sbjct: 404 PGLAESYEVQGRGELQLGILIE------------------------------------NM 427 Query: 2114 XXXXFELSVSPPKVMYKLEKGQKLXXXXXXXXXXXXXXXGLVMEALSHRRAEVLDMGPVP 2293 FELSVSPPKVMYK G+KL GL+MEALSHRR EV+DMGPVP Sbjct: 428 RREGFELSVSPPKVMYKTVNGEKLEPIEEVTIEVNEEHVGLIMEALSHRRGEVVDMGPVP 487 Query: 2294 GDIGRTRMSLNCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYAKHCGPLGNVRKGVLVSVG 2473 G +GRTR+SL CPSRGLVGYRSVFSSDTRGTGFMHRAFL YAKH G LGNVRKGVLVSVG Sbjct: 488 GSVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLTYAKHRGSLGNVRKGVLVSVG 547 Query: 2474 YGAITAHALVSLEARGTLFVSPGMETY 2554 YGAITAHAL+SLEARGTLFV+PGMETY Sbjct: 548 YGAITAHALMSLEARGTLFVTPGMETY 574