BLASTX nr result

ID: Coptis24_contig00005163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005163
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine...   137   3e-30
emb|CAN66709.1| hypothetical protein VITISV_006396 [Vitis vinifera]   136   6e-30
emb|CAN83365.1| hypothetical protein VITISV_032776 [Vitis vinifera]   131   2e-28
ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine...   129   9e-28
emb|CBI20016.3| unnamed protein product [Vitis vinifera]              129   9e-28

>ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130 [Vitis vinifera]
           gi|296081492|emb|CBI20015.3| unnamed protein product
           [Vitis vinifera]
          Length = 1031

 Score =  137 bits (346), Expect = 3e-30
 Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 16/127 (12%)
 Frame = +3

Query: 576 MKLV---EFLCCVFLSL------------LISTSQAQTPTDPSEVRALNSIFQQWGISAV 710
           MKLV   + + C+F++L            +  T++A   TDPSEVR LNSIFQQWGISA 
Sbjct: 1   MKLVPGAQSVRCIFVALCSVYVIGLFHIAVAQTTEANATTDPSEVRVLNSIFQQWGISAS 60

Query: 711 SSWNRSGNPCTGAAIDTTDIDEPAFNPGIKCNCGLTN-GTCHITQLRVFALSVRGVIPEE 887
           + WN SG PCTGAAID+T ID   +NPGIKC+C   N  TCHITQL+V+AL V GVIP+E
Sbjct: 61  NQWNTSGEPCTGAAIDSTSIDSSDYNPGIKCDCSYDNASTCHITQLKVYALDVVGVIPDE 120

Query: 888 LGSLTFL 908
           L +LTFL
Sbjct: 121 LWNLTFL 127


>emb|CAN66709.1| hypothetical protein VITISV_006396 [Vitis vinifera]
          Length = 1133

 Score =  136 bits (343), Expect = 6e-30
 Identities = 65/95 (68%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
 Frame = +3

Query: 627 TSQAQTPTDPSEVRALNSIFQQWGISAVSSWNRSGNPCTGAAIDTTDIDEPAFNPGIKCN 806
           T++A   TDPSEVR LNSIFQQWGISA + WN SG PCTGAAID+T ID   +NPGIKC+
Sbjct: 59  TTEANATTDPSEVRVLNSIFQQWGISASNQWNTSGEPCTGAAIDSTSIDSSDYNPGIKCD 118

Query: 807 CGLTN-GTCHITQLRVFALSVRGVIPEELGSLTFL 908
           C   N  TCHITQL+V+AL V GVIP+EL +LTFL
Sbjct: 119 CSYDNASTCHITQLKVYALDVVGVIPDELWNLTFL 153


>emb|CAN83365.1| hypothetical protein VITISV_032776 [Vitis vinifera]
          Length = 223

 Score =  131 bits (330), Expect = 2e-28
 Identities = 70/123 (56%), Positives = 88/123 (71%), Gaps = 12/123 (9%)
 Frame = +3

Query: 576 MKLV---EFLCCVFLSLLIS--------TSQAQTPTDPSEVRALNSIFQQWGISAVSSWN 722
           MKL+   + + CVF++L I         T++A    DPSEVRALNSIFQQWGISA + WN
Sbjct: 1   MKLIPGAQSVSCVFVALCIGLFHVAAAQTTEANATADPSEVRALNSIFQQWGISASNEWN 60

Query: 723 RSGNPCTGAAIDTTDIDEPAFNPGIKCNCGLTN-GTCHITQLRVFALSVRGVIPEELGSL 899
            SG PCTGAA+D++DI+    NPGIKC+C   +  TCHITQL+V+AL V GVIP+EL +L
Sbjct: 61  TSGEPCTGAALDSSDIE----NPGIKCDCSYDSASTCHITQLKVYALDVVGVIPDELWNL 116

Query: 900 TFL 908
           TFL
Sbjct: 117 TFL 119


>ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1031

 Score =  129 bits (324), Expect = 9e-28
 Identities = 67/111 (60%), Positives = 79/111 (71%), Gaps = 6/111 (5%)
 Frame = +3

Query: 594 LCCVFLSLLISTSQAQTP-----TDPSEVRALNSIFQQWGISAVSSWNRSGNPCTGAAID 758
           LC V+++ L   + AQT      TDPSEVR LNSIF+QWGISA S W   G PCTGAAID
Sbjct: 17  LCSVYVTGLFHIAAAQTTEANATTDPSEVRVLNSIFRQWGISASSQWRTIGEPCTGAAID 76

Query: 759 TTDIDEPAFNPGIKCNCGLTN-GTCHITQLRVFALSVRGVIPEELGSLTFL 908
           +T ID   +N GIKC+C   N  TCHITQL+V+AL V GVIP+EL +LTFL
Sbjct: 77  STSIDSADYNFGIKCDCSYDNASTCHITQLKVYALDVVGVIPDELWNLTFL 127


>emb|CBI20016.3| unnamed protein product [Vitis vinifera]
          Length = 2193

 Score =  129 bits (324), Expect = 9e-28
 Identities = 67/111 (60%), Positives = 79/111 (71%), Gaps = 6/111 (5%)
 Frame = +3

Query: 594  LCCVFLSLLISTSQAQTP-----TDPSEVRALNSIFQQWGISAVSSWNRSGNPCTGAAID 758
            LC V+++ L   + AQT      TDPSEVR LNSIF+QWGISA S W   G PCTGAAID
Sbjct: 1166 LCSVYVTGLFHIAAAQTTEANATTDPSEVRVLNSIFRQWGISASSQWRTIGEPCTGAAID 1225

Query: 759  TTDIDEPAFNPGIKCNCGLTN-GTCHITQLRVFALSVRGVIPEELGSLTFL 908
            +T ID   +N GIKC+C   N  TCHITQL+V+AL V GVIP+EL +LTFL
Sbjct: 1226 STSIDSADYNFGIKCDCSYDNASTCHITQLKVYALDVVGVIPDELWNLTFL 1276



 Score =  122 bits (307), Expect = 9e-26
 Identities = 61/103 (59%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = +3

Query: 603 VFLSLLISTSQAQTPTDPSEVRALNSIFQQWGISAVSSWNRSGNPCTGAAIDTTDIDEPA 782
           +F +    +++A   TDPSEV  LNSIFQQWGISA + WN SG PCTGAA+D+ DI    
Sbjct: 91  LFHAAAAQSTEANATTDPSEVTILNSIFQQWGISASNEWNTSGEPCTGAALDSADIK--- 147

Query: 783 FNPGIKCNCGLTN-GTCHITQLRVFALSVRGVIPEELGSLTFL 908
            NPGIKC+C   N  TCHITQL+V+AL V G IP+EL +LTFL
Sbjct: 148 -NPGIKCDCSYDNASTCHITQLKVYALDVVGAIPDELWNLTFL 189


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