BLASTX nr result
ID: Coptis24_contig00005161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005161
(1583 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC71666.1| hypothetical protein OsI_04129 [Oryza sativa Indi... 431 e-134
ref|NP_001167651.1| uncharacterized protein LOC100381281 [Zea ma... 431 e-134
tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays] 431 e-134
ref|XP_002322609.1| tubulin, beta chain [Populus trichocarpa] gi... 431 e-134
sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltNa... 431 e-134
>gb|EEC71666.1| hypothetical protein OsI_04129 [Oryza sativa Indica Group]
Length = 496
Score = 431 bits (1108), Expect(2) = e-134
Identities = 210/211 (99%), Positives = 211/211 (100%)
Frame = +3
Query: 459 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 638
LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 236 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 295
Query: 639 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 818
NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 296 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 355
Query: 819 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 998
HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 356 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 415
Query: 999 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 1091
FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 416 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 446
Score = 77.0 bits (188), Expect(2) = e-134
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 268 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 378
LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 199 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 235
Score = 90.5 bits (223), Expect = 1e-15
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +2
Query: 2 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 124
PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC
Sbjct: 136 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 176
>ref|NP_001167651.1| uncharacterized protein LOC100381281 [Zea mays]
gi|194702760|gb|ACF85464.1| unknown [Zea mays]
gi|414880072|tpg|DAA57203.1| TPA: beta tubulin6 isoform 1
[Zea mays] gi|414880073|tpg|DAA57204.1| TPA: beta
tubulin6 isoform 2 [Zea mays]
Length = 496
Score = 431 bits (1108), Expect(2) = e-134
Identities = 210/211 (99%), Positives = 211/211 (100%)
Frame = +3
Query: 459 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 638
LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 237 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 296
Query: 639 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 818
NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 297 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 356
Query: 819 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 998
HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 357 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 416
Query: 999 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 1091
FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 417 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 447
Score = 77.0 bits (188), Expect(2) = e-134
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 268 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 378
LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 200 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 236
Score = 90.5 bits (223), Expect = 1e-15
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +2
Query: 2 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 124
PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC
Sbjct: 137 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 177
>tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays]
Length = 488
Score = 431 bits (1108), Expect(2) = e-134
Identities = 210/211 (99%), Positives = 211/211 (100%)
Frame = +3
Query: 459 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 638
LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 229 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 288
Query: 639 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 818
NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 289 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 348
Query: 819 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 998
HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 349 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 408
Query: 999 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 1091
FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 409 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 439
Score = 77.0 bits (188), Expect(2) = e-134
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 268 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 378
LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 192 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 228
Score = 90.5 bits (223), Expect = 1e-15
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +2
Query: 2 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 124
PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC
Sbjct: 129 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 169
>ref|XP_002322609.1| tubulin, beta chain [Populus trichocarpa] gi|118486106|gb|ABK94896.1|
unknown [Populus trichocarpa] gi|222867239|gb|EEF04370.1|
tubulin, beta chain [Populus trichocarpa]
Length = 450
Score = 431 bits (1108), Expect(2) = e-134
Identities = 210/211 (99%), Positives = 211/211 (100%)
Frame = +3
Query: 459 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 638
LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246
Query: 639 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 818
NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 306
Query: 819 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 998
HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGL+MAST
Sbjct: 307 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLAMAST 366
Query: 999 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 1091
FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397
Score = 77.0 bits (188), Expect(2) = e-134
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 268 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 378
LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Score = 90.5 bits (223), Expect = 1e-15
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +2
Query: 2 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 124
PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
>sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
gi|4415992|gb|AAD20179.1| beta-tubulin 2 [Eleusine
indica]
Length = 448
Score = 431 bits (1108), Expect(2) = e-134
Identities = 210/211 (99%), Positives = 211/211 (100%)
Frame = +3
Query: 459 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 638
LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246
Query: 639 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 818
NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPR
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306
Query: 819 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 998
HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST
Sbjct: 307 HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAST 366
Query: 999 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 1091
FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397
Score = 77.0 bits (188), Expect(2) = e-134
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 268 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 378
LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Score = 90.5 bits (223), Expect = 1e-15
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +2
Query: 2 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 124
PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127