BLASTX nr result

ID: Coptis24_contig00005147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005147
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312339.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002312339.1| predicted protein [Populus trichocarpa] gi|222852159|gb|EEE89706.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 3/47 (6%)
 Frame = -1

Query: 360 YFTAVEGAGFDSGNGVP---DVTGHKKRGMPHFRGETSQKSLEAIVR 229
           YFTA+EG+GF+S  GVP    V G K+   P  RGET++KSLEA+VR
Sbjct: 54  YFTAIEGSGFESSGGVPPEISVDGKKRHRAPDLRGETNRKSLEALVR 100


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