BLASTX nr result

ID: Coptis24_contig00005146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005146
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263...   128   3e-47
ref|XP_002519203.1| protein translocase, putative [Ricinus commu...   126   7e-45
ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|2...   124   3e-44
ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800...   125   4e-44
ref|NP_001237610.1| uncharacterized protein LOC100305849 [Glycin...   124   5e-44

>ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263757 [Vitis vinifera]
           gi|296083265|emb|CBI22901.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  128 bits (321), Expect(2) = 3e-47
 Identities = 64/87 (73%), Positives = 72/87 (82%)
 Frame = -2

Query: 701 KSLEAIVKNTGKESLQWGMVAGMYSGLTYGLREARGAHDWKNSXXXXXXXXXXXXXTSDC 522
           KSLEA+VK+TGKESLQWG+ AGMYSGLTYGL+EARGAHDWKNS             TS+ 
Sbjct: 91  KSLEALVKSTGKESLQWGLAAGMYSGLTYGLKEARGAHDWKNSAVAGAVTGVALALTSND 150

Query: 521 SSHEQIVQCAITGAAISTAANMLSGIF 441
           +SHEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 151 TSHEQIVQCAITGAAISTAANLLTGIF 177



 Score = 88.2 bits (217), Expect(2) = 3e-47
 Identities = 45/56 (80%), Positives = 48/56 (85%), Gaps = 5/56 (8%)
 Frame = -3

Query: 967 LETRSLFD-----DKGGYVDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEG 815
           LETRSL D     DKGG+ DLGHPLLNR AESFVKAAGIGA+QAVSREAYFTA+EG
Sbjct: 5   LETRSLLDELRDFDKGGFFDLGHPLLNRFAESFVKAAGIGAIQAVSREAYFTAIEG 60


>ref|XP_002519203.1| protein translocase, putative [Ricinus communis]
           gi|223541518|gb|EEF43067.1| protein translocase,
           putative [Ricinus communis]
          Length = 181

 Score =  126 bits (317), Expect(2) = 7e-45
 Identities = 63/87 (72%), Positives = 71/87 (81%)
 Frame = -2

Query: 701 KSLEAIVKNTGKESLQWGMVAGMYSGLTYGLREARGAHDWKNSXXXXXXXXXXXXXTSDC 522
           KSLEA+VK+TGKES+QWG+ AG+YSGLTYGLREARGAHDWKNS             T+D 
Sbjct: 95  KSLEALVKSTGKESMQWGLAAGVYSGLTYGLREARGAHDWKNSAVAGAVTGMALALTADD 154

Query: 521 SSHEQIVQCAITGAAISTAANMLSGIF 441
            SHEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 155 VSHEQIVQCAITGAAISTAANLLTGIF 181



 Score = 81.6 bits (200), Expect(2) = 7e-45
 Identities = 41/57 (71%), Positives = 47/57 (82%), Gaps = 5/57 (8%)
 Frame = -3

Query: 970 KLETRSLFDD-----KGGYVDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEG 815
           KL+TR+  D+     KG   DLGHPLLNR+AESFVKAAGIGA+QAVSREAYFTA+EG
Sbjct: 4   KLQTRTFMDELRGFEKGWMFDLGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEG 60


>ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|222863969|gb|EEF01100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  124 bits (312), Expect(2) = 3e-44
 Identities = 62/87 (71%), Positives = 68/87 (78%)
 Frame = -2

Query: 701 KSLEAIVKNTGKESLQWGMVAGMYSGLTYGLREARGAHDWKNSXXXXXXXXXXXXXTSDC 522
           KSLEA+V NTGKESLQWG+ AG+YSGLTYGLRE+RG HDWKNS             T+D 
Sbjct: 93  KSLEALVMNTGKESLQWGLAAGVYSGLTYGLRESRGVHDWKNSAVAGAITGVALALTADD 152

Query: 521 SSHEQIVQCAITGAAISTAANMLSGIF 441
            SHEQIVQCAITGAAISTAAN+L GIF
Sbjct: 153 KSHEQIVQCAITGAAISTAANLLKGIF 179



 Score = 81.6 bits (200), Expect(2) = 3e-44
 Identities = 41/56 (73%), Positives = 45/56 (80%), Gaps = 5/56 (8%)
 Frame = -3

Query: 967 LETRSLFD-----DKGGYVDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEG 815
           LETRS  D     DK  + D GHPLLNR+AESFVKAAGIGA+QAVSREAYFTA+EG
Sbjct: 5   LETRSFVDEIRHFDKSSFFDFGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEG 60


>ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800540 [Glycine max]
          Length = 181

 Score =  125 bits (313), Expect(2) = 4e-44
 Identities = 62/87 (71%), Positives = 71/87 (81%)
 Frame = -2

Query: 701 KSLEAIVKNTGKESLQWGMVAGMYSGLTYGLREARGAHDWKNSXXXXXXXXXXXXXTSDC 522
           KSLEA+VKNTGKESLQWG+ AG+Y+GLTYGL+EARGAHDWKNS             T + 
Sbjct: 95  KSLEAMVKNTGKESLQWGVAAGLYAGLTYGLKEARGAHDWKNSAVAGAITGATLALTLED 154

Query: 521 SSHEQIVQCAITGAAISTAANMLSGIF 441
           S+HEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 155 STHEQIVQCAITGAAISTAANLLTGIF 181



 Score = 80.9 bits (198), Expect(2) = 4e-44
 Identities = 42/56 (75%), Positives = 46/56 (82%), Gaps = 5/56 (8%)
 Frame = -3

Query: 967 LETRSLFDD-----KGGYVDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEG 815
           LETRSL D+     K G  DLGHPLLNR+ E+FVKAAGIGAVQAVSREAYFTA+EG
Sbjct: 9   LETRSLLDELCNFHKKGLFDLGHPLLNRILETFVKAAGIGAVQAVSREAYFTAIEG 64


>ref|NP_001237610.1| uncharacterized protein LOC100305849 [Glycine max]
           gi|255626765|gb|ACU13727.1| unknown [Glycine max]
          Length = 181

 Score =  124 bits (311), Expect(2) = 5e-44
 Identities = 62/87 (71%), Positives = 71/87 (81%)
 Frame = -2

Query: 701 KSLEAIVKNTGKESLQWGMVAGMYSGLTYGLREARGAHDWKNSXXXXXXXXXXXXXTSDC 522
           KSLEA+VK+TGKESLQWG+ AG+YSGLTYGL+EARGAHDWKNS             T + 
Sbjct: 95  KSLEAMVKSTGKESLQWGVAAGLYSGLTYGLKEARGAHDWKNSAVAGAITGATLALTLED 154

Query: 521 SSHEQIVQCAITGAAISTAANMLSGIF 441
           S+HEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 155 STHEQIVQCAITGAAISTAANLLTGIF 181



 Score = 81.3 bits (199), Expect(2) = 5e-44
 Identities = 42/56 (75%), Positives = 47/56 (83%), Gaps = 5/56 (8%)
 Frame = -3

Query: 967 LETRSLFDD-----KGGYVDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEG 815
           LETRSL D+     K G +DLGHPLLNR+ ESFVKAAGIGAVQAVSREAYFTA++G
Sbjct: 9   LETRSLLDELCNFNKKGLLDLGHPLLNRIFESFVKAAGIGAVQAVSREAYFTAIDG 64


Top