BLASTX nr result
ID: Coptis24_contig00005142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005142
(1448 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16670.3| unnamed protein product [Vitis vinifera] 380 e-103
ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253... 370 e-100
ref|XP_002511580.1| RING finger protein, putative [Ricinus commu... 352 2e-94
ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|2... 340 7e-91
ref|NP_001241545.1| uncharacterized protein LOC100791789 [Glycin... 330 7e-88
>emb|CBI16670.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 380 bits (976), Expect = e-103
Identities = 184/337 (54%), Positives = 238/337 (70%), Gaps = 3/337 (0%)
Frame = +1
Query: 43 SVYGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPRVGIRESKG 222
+VYGEDCLV+ FPPHLH+HIKPRTAD SSQQFVEA+L ++AG++YP+EPP + I +SKG
Sbjct: 15 AVYGEDCLVLDHFPPHLHVHIKPRTADVSSQQFVEAVLGIQAGSKYPNEPPIIDIIDSKG 74
Query: 223 LDEVRQAHLMASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGH 402
LDE RQ HL+ SI+ K ELSSCLML+ALCEEAV+ LS MNHPDG+CPLCLYPL E
Sbjct: 75 LDEERQMHLIRSIRNKACELSSCLMLVALCEEAVERLSTMNHPDGNCPLCLYPLFPEHKQ 134
Query: 403 GNLLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETDP--IXXXXXXXXXXXXXRTDMRGTE 576
N+LPFMKLMSC+HCFHS+CII+WWNW+Q Q E DP + M G
Sbjct: 135 NNILPFMKLMSCFHCFHSECIIRWWNWLQTQEEMDPDNSSSAIVQPSNEIEQQQGMHGMT 194
Query: 577 KENQGTCPVCRKVFQATDIEHVLNLIKTYTPELSLEETEIDDDEEFQRAEVENIRRKNFE 756
+ + G CPVCRKVF A DIEHVL+L+ +++ LS TEI DDE+ ++ E RR FE
Sbjct: 195 EGSTGNCPVCRKVFHAKDIEHVLSLVGSHSSNLSSNGTEITDDEKLLHSDSELTRRLKFE 254
Query: 757 ALLKLQEENNGLIKPRRNEVLLPGVFLPEPVT-PPSISPKATAEQQTEPSFTPTSETGPS 933
A+LKLQEEN+GLI+P++N V++PG+FL P+ PP++S K +Q + SET S
Sbjct: 255 AVLKLQEENSGLIEPKKNGVIVPGMFLQRPIAPPPALSAKGPTSEQQQRDAITFSETSSS 314
Query: 934 KPLNKGSTSARNNFRTRKNTMRNRRVRTTEWVKKENS 1044
++ STS + N R++ +RN R +WVKK+N+
Sbjct: 315 GSSSRASTSEQRNLGMRRHRVRNSRKPVKQWVKKDNT 351
>ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253028 [Vitis vinifera]
Length = 429
Score = 370 bits (949), Expect = e-100
Identities = 178/322 (55%), Positives = 227/322 (70%), Gaps = 1/322 (0%)
Frame = +1
Query: 43 SVYGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPRVGIRESKG 222
+VYGEDCLV+ FPPHLH+HIKPRTAD SSQQFVEA+L ++AG++YP+EPP + I +SKG
Sbjct: 15 AVYGEDCLVLDHFPPHLHVHIKPRTADVSSQQFVEAVLGIQAGSKYPNEPPIIDIIDSKG 74
Query: 223 LDEVRQAHLMASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGH 402
LDE RQ HL+ SI+ K ELSSCLML+ALCEEAV+ LS MNHPDG+CPLCLYPL E
Sbjct: 75 LDEERQMHLIRSIRNKACELSSCLMLVALCEEAVERLSTMNHPDGNCPLCLYPLFPEHKQ 134
Query: 403 GNLLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETDPIXXXXXXXXXXXXXRTDMRGTEKE 582
N+LPFMKLMSC+HCFHS+CII+WWNW+Q Q E DP M G +
Sbjct: 135 NNILPFMKLMSCFHCFHSECIIRWWNWLQTQEEMDPDNSSTLHIQQGSTSSKSMHGMTEG 194
Query: 583 NQGTCPVCRKVFQATDIEHVLNLIKTYTPELSLEETEIDDDEEFQRAEVENIRRKNFEAL 762
+ G CPVCRKVF A DIEHVL+L+ +++ LS TEI DDE+ ++ E RR FEA+
Sbjct: 195 STGNCPVCRKVFHAKDIEHVLSLVGSHSSNLSSNGTEITDDEKLLHSDSELTRRLKFEAV 254
Query: 763 LKLQEENNGLIKPRRNEVLLPGVFLPEPVT-PPSISPKATAEQQTEPSFTPTSETGPSKP 939
LKLQEEN+GLI+P++N V++PG+FL P+ PP++S K +Q + SET S
Sbjct: 255 LKLQEENSGLIEPKKNGVIVPGMFLQRPIAPPPALSAKGPTSEQQQRDAITFSETSSSGS 314
Query: 940 LNKGSTSARNNFRTRKNTMRNR 1005
++ STS + N R++ R R
Sbjct: 315 SSRASTSEQRNLGMRRHRSRTR 336
>ref|XP_002511580.1| RING finger protein, putative [Ricinus communis]
gi|223548760|gb|EEF50249.1| RING finger protein, putative
[Ricinus communis]
Length = 355
Score = 352 bits (902), Expect = 2e-94
Identities = 173/338 (51%), Positives = 239/338 (70%), Gaps = 5/338 (1%)
Frame = +1
Query: 43 SVYGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPRVGIRESKG 222
++YG+DC+VI FPPHLH+HIKPRTAD SSQQFVEAI+ +RAG +YP+EPP + + ESKG
Sbjct: 19 AMYGDDCVVIDSFPPHLHVHIKPRTADVSSQQFVEAIIGIRAGPKYPNEPPCINLIESKG 78
Query: 223 LDEVRQAHLMASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGH 402
LD+ RQ L++SI++K ELSSCLML+ALCEEAV+ LS MNHPDG+CPLCLYPLV ED
Sbjct: 79 LDDQRQKQLISSIQDKACELSSCLMLVALCEEAVEKLSIMNHPDGNCPLCLYPLVPEDEP 138
Query: 403 GNLLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETDPIXXXXXXXXXXXXXRTDMRGTEK- 579
LPFMKLMSC+HCFHS+CI++WWNW+Q++ +++ R + +
Sbjct: 139 DETLPFMKLMSCFHCFHSECIMRWWNWLQKEKDSN-ASSSSITTVHFVEGRVNQNAIHEL 197
Query: 580 --ENQGTCPVCRKVFQATDIEHVLNLIKTYTPELSLEETEIDDDEEFQRAEVENIRRKNF 753
E+ G CPVCRKVF D EHVL+L+ + ELS + E+ ++E +++ E+IRR+ F
Sbjct: 198 MGESLGNCPVCRKVFHTKDFEHVLSLVGVHCFELSSDRKEV--NKELLQSDSESIRRQKF 255
Query: 754 EALLKLQEENNGLIKPRRNEVLLPGVFLPEPVTPPS--ISPKATAEQQTEPSFTPTSETG 927
EALLKLQ+ENNGLI+P+++ V+LPG++LP+PVT P+ ++ + T E Q + + ++TG
Sbjct: 256 EALLKLQQENNGLIEPKKSLVVLPGMYLPQPVTVPAQMVNKETTVETQRDSRVSMETKTG 315
Query: 928 PSKPLNKGSTSARNNFRTRKNTMRNRRVRTTEWVKKEN 1041
S NK S R N R +N R + +WV+KE+
Sbjct: 316 DSS--NKPSPRERRNLGRRMQVTQNARKQVRQWVRKED 351
>ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|222844222|gb|EEE81769.1|
predicted protein [Populus trichocarpa]
Length = 354
Score = 340 bits (871), Expect = 7e-91
Identities = 168/343 (48%), Positives = 229/343 (66%), Gaps = 6/343 (1%)
Frame = +1
Query: 43 SVYGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPRVGIRESKG 222
++YG+DC++++ FPPHLHLHIKPRTAD SSQQFVEA++ +RAG QYP +PP + + ESKG
Sbjct: 15 AMYGDDCVILESFPPHLHLHIKPRTADISSQQFVEAVIGIRAGPQYPSKPPWIDLIESKG 74
Query: 223 LDEVRQAHLMASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGH 402
LD RQ L+ I+EK ELSSCLML+ALCEEAV+ L+ MNHPDGDCPLC+ P V ED
Sbjct: 75 LDGERQKQLITGIQEKACELSSCLMLVALCEEAVEKLTVMNHPDGDCPLCMCPFVPEDEQ 134
Query: 403 GNLLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETD-----PIXXXXXXXXXXXXXRTDMR 567
LPFMKLMSC+HCFH +CI++WWNWIQ++ E++ +D+
Sbjct: 135 DEALPFMKLMSCFHCFHCECIVRWWNWIQKEKESNTSTSSSTTLLQIKEMGNQNGLSDVH 194
Query: 568 GTEKENQGTCPVCRKVFQATDIEHVLNLIKTYTPELSLEETEIDDDEEFQRAEVENIRRK 747
G +E G CPVCRKVF D EHVL+L+ T +L E EI +E+ ++ EN RR+
Sbjct: 195 GVLEERMGDCPVCRKVFHVKDFEHVLDLVGTQASQLD-SEAEIKYEEKLLHSDSENFRRQ 253
Query: 748 NFEALLKLQEENNGLIKPRRNEVLLPGVFLPEPVTPPSIS-PKATAEQQTEPSFTPTSET 924
FEA+LKLQ+EN+GLI+P+R V++PG++LP+ T + + K TAE Q + P++ET
Sbjct: 254 KFEAILKLQQENSGLIEPKREIVVVPGIYLPQRATSAAQTVNKETAEHQGTEA-RPSTET 312
Query: 925 GPSKPLNKGSTSARNNFRTRKNTMRNRRVRTTEWVKKENSTVE 1053
LN+ N R+ +RN R ++WV++EN T +
Sbjct: 313 NLGSSLNRPRPRESRN-SGRRQGVRNSRRPVSQWVRRENGTAD 354
>ref|NP_001241545.1| uncharacterized protein LOC100791789 [Glycine max]
gi|255644864|gb|ACU22932.1| unknown [Glycine max]
Length = 366
Score = 330 bits (845), Expect = 7e-88
Identities = 160/347 (46%), Positives = 230/347 (66%), Gaps = 14/347 (4%)
Frame = +1
Query: 43 SVYGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPRVGIRESKG 222
+VYG DC++++ FPPH H+ +KPRTAD SSQQFVEA+LE++A +QYP EPP V + + KG
Sbjct: 19 AVYGTDCVLLRSFPPHFHISLKPRTADVSSQQFVEAVLEIQASSQYPKEPPSVDLVDCKG 78
Query: 223 LDEVRQAHLMASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGH 402
LDE R+ +L+ I+ K ELS CLML+ALCEEA + LS MNHPDGDCPLCL+PLV ED
Sbjct: 79 LDEQRKKYLLNCIQSKAYELSPCLMLVALCEEAAEKLSSMNHPDGDCPLCLFPLVPEDQE 138
Query: 403 GNLLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETDPIXXXXXXXXXXXXXRTDMRGTEKE 582
LPFMKLMSC+HCFHS+CII+WW W+Q ++ D D +E
Sbjct: 139 SGTLPFMKLMSCFHCFHSECIIRWWKWLQNSNKVD----SSNTDSAAAHRNQDNPKKTEE 194
Query: 583 NQGTCPVCRKVFQATDIEHVLNLIKTYTPELSLEETEIDDDEEFQRAEVENIRRKNFEAL 762
+ G CPVCRK F A D++HVL L+ +Y+ +LS + E++++E+ ++E E RR+ +EA+
Sbjct: 195 SVGNCPVCRKPFLAKDLDHVLALVGSYSSQLSSDNEELNEEEKLLQSEDEINRRQKYEAI 254
Query: 763 LKLQEENNGLIKPRRNEVLLPGVFLPEPVTPPSISPKATA---EQQTEPSFTPTSETGPS 933
L LQ+EN+GLI+P++ V+LPG++LP+PV PS +P + +Q+ P+ P G +
Sbjct: 255 LNLQKENSGLIEPKKEMVILPGMYLPQPVAMPSSTPTKESDEPQQKDPPAVVPEKHAGGT 314
Query: 934 KPLNKGSTSARNNFRTRK----------NTMRN-RRVRTTEWVKKEN 1041
+ S+S + NF R+ +T RN R+ +WV+++N
Sbjct: 315 SNSSIPSSSRQRNFGARRQKARSDNHSSSTARNPRKPAQQQWVRRDN 361