BLASTX nr result

ID: Coptis24_contig00005140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005140
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634209.1| PREDICTED: ubiquitin-like protein-like [Viti...   171   2e-40
emb|CBI15587.3| unnamed protein product [Vitis vinifera]              171   2e-40
gb|ABK94223.1| unknown [Populus trichocarpa]                          161   2e-37
ref|XP_002309363.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-36
ref|NP_001237412.1| uncharacterized protein LOC100499885 [Glycin...   152   1e-34

>ref|XP_003634209.1| PREDICTED: ubiquitin-like protein-like [Vitis vinifera]
          Length = 103

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/104 (78%), Positives = 93/104 (89%)
 Frame = +2

Query: 170 MAMYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLA 349
           MAMYIRVKR KTTYFLQCDPTET+LD+K KL  LID+P++DQRL+LV T E+LDD+KTLA
Sbjct: 1   MAMYIRVKRSKTTYFLQCDPTETILDVKQKLHTLIDQPINDQRLILVGTGEILDDSKTLA 60

Query: 350 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 481
           DQKVENDAVVALTLRKDDNEFE+V I++P DDFY SRD DG SW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEDVNIVRPNDDFYQSRDPDG-SW 103


>emb|CBI15587.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/104 (78%), Positives = 93/104 (89%)
 Frame = +2

Query: 170 MAMYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLA 349
           MAMYIRVKR KTTYFLQCDPTET+LD+K KL  LID+P++DQRL+LV T E+LDD+KTLA
Sbjct: 72  MAMYIRVKRSKTTYFLQCDPTETILDVKQKLHTLIDQPINDQRLILVGTGEILDDSKTLA 131

Query: 350 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 481
           DQKVENDAVVALTLRKDDNEFE+V I++P DDFY SRD DG SW
Sbjct: 132 DQKVENDAVVALTLRKDDNEFEDVNIVRPNDDFYQSRDPDG-SW 174


>gb|ABK94223.1| unknown [Populus trichocarpa]
          Length = 103

 Score =  161 bits (408), Expect = 2e-37
 Identities = 79/104 (75%), Positives = 92/104 (88%)
 Frame = +2

Query: 170 MAMYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLA 349
           MAMYIRVKR KTTYF+QCDPTE  L+IK KL  LID+PV+DQRL+LV T EVL+D+K+LA
Sbjct: 1   MAMYIRVKRNKTTYFIQCDPTEKTLEIKQKLNVLIDQPVNDQRLILVGTGEVLEDSKSLA 60

Query: 350 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 481
           +QKVENDAVVALTLRKDDNEFE+V I++P DDFY SRDADG +W
Sbjct: 61  EQKVENDAVVALTLRKDDNEFEDVSIVRP-DDFYQSRDADGTNW 103


>ref|XP_002309363.1| predicted protein [Populus trichocarpa] gi|222855339|gb|EEE92886.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  158 bits (399), Expect = 2e-36
 Identities = 77/102 (75%), Positives = 90/102 (88%)
 Frame = +2

Query: 176 MYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLADQ 355
           MYIRVKR KTTYF+QCDPTE  L+IK KL  LID+PV+DQRL+LV T EVL+D+K+LA+Q
Sbjct: 1   MYIRVKRNKTTYFIQCDPTEKTLEIKQKLNVLIDQPVNDQRLILVGTGEVLEDSKSLAEQ 60

Query: 356 KVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 481
           KVENDAVVALTLRKDDNEFE+V I++P DDFY SRDADG +W
Sbjct: 61  KVENDAVVALTLRKDDNEFEDVSIVRP-DDFYQSRDADGTNW 101


>ref|NP_001237412.1| uncharacterized protein LOC100499885 [Glycine max]
           gi|255627435|gb|ACU14062.1| unknown [Glycine max]
          Length = 103

 Score =  152 bits (383), Expect = 1e-34
 Identities = 73/104 (70%), Positives = 90/104 (86%)
 Frame = +2

Query: 170 MAMYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLA 349
           M MYIRVKR KTTYF++C P++ +LDIK KL  L+D+P ++QRL+L  T EVL+D+KTLA
Sbjct: 1   MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPVTGEVLEDSKTLA 60

Query: 350 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 481
           DQKVENDAVVALTLRKDDNEFEEV I++P +DFY +RDADGA+W
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEVNIVRP-NDFYQARDADGANW 103


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