BLASTX nr result
ID: Coptis24_contig00005138
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005138 (2122 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera] 164 6e-51 ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|22... 164 2e-50 emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera] 164 4e-47 ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max] 149 1e-46 emb|CBI26220.3| unnamed protein product [Vitis vinifera] 167 1e-38 >ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera] Length = 363 Score = 164 bits (416), Expect(2) = 6e-51 Identities = 85/117 (72%), Positives = 96/117 (82%) Frame = +2 Query: 704 MVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQ 883 ++ATA+LFLAAKSEET RPLN+V+RASCEI HK L F LLPVDWFEQYRERV +AEQ Sbjct: 202 LIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQ 261 Query: 884 MILTTLNFELNVQHPYDPLTSVLSKLGLSQTVLVNLALCLVSEGXYTVFIFQILNYH 1054 MILTTL+FEL V+HPY PLTSVL+KLGLSQTVLVNLAL LVSEG + Q +H Sbjct: 262 MILTTLDFELTVEHPYVPLTSVLNKLGLSQTVLVNLALHLVSEGLRSSLWLQFKPHH 318 Score = 65.1 bits (157), Expect(2) = 6e-51 Identities = 30/51 (58%), Positives = 36/51 (70%) Frame = +1 Query: 1144 QFKPHHIXXXXXXXXXKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 1296 QFKPHHI KILN D+A++ +WQEFQTTP+I QDV +QL ELF Sbjct: 313 QFKPHHIAAGAAYLAAKILNLDVASYQYIWQEFQTTPAILQDVAQQLMELF 363 Score = 113 bits (282), Expect = 2e-22 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Frame = +1 Query: 265 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCL-TGAKRDLEIL 441 P+ K+RKFSAS+WE+ YQ+ +NAPST NS AP R + T KRD L Sbjct: 66 PSLKRRKFSASAWEDTGRRYQQQTTYDNAPSTCNSLVPAPTRPNANAYTSTSCKRDRSKL 125 Query: 442 -DDDIVFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 564 DDD+VFMSR EIER SPSRKDGID+LRE +LRYSYCAFLQN Sbjct: 126 EDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQN 167 >ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|223543846|gb|EEF45374.1| Cyclin-L1, putative [Ricinus communis] Length = 403 Score = 164 bits (414), Expect(2) = 2e-50 Identities = 83/117 (70%), Positives = 96/117 (82%) Frame = +2 Query: 704 MVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQ 883 ++ATAALFLA+KSEET RPLN++LRAS EI HKQ ++ LLPVDWFEQYRERV +AEQ Sbjct: 242 LIATAALFLASKSEETPRPLNNMLRASSEILHKQDMSLLSYLLPVDWFEQYRERVIEAEQ 301 Query: 884 MILTTLNFELNVQHPYDPLTSVLSKLGLSQTVLVNLALCLVSEGXYTVFIFQILNYH 1054 MILTTLNFELNVQHPY PLTSVL+K+G SQTVLVNLAL L+SEG + Q +H Sbjct: 302 MILTTLNFELNVQHPYAPLTSVLNKIGFSQTVLVNLALNLISEGLRSSLWLQFKPHH 358 Score = 63.9 bits (154), Expect(2) = 2e-50 Identities = 29/51 (56%), Positives = 34/51 (66%) Frame = +1 Query: 1144 QFKPHHIXXXXXXXXXKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 1296 QFKPHHI + LN DLA + +WQEFQTTP+I QDV +QL ELF Sbjct: 353 QFKPHHIAAGAAYLAARFLNLDLACYQNIWQEFQTTPAIIQDVAQQLMELF 403 Score = 92.4 bits (228), Expect = 4e-16 Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 2/102 (1%) Frame = +1 Query: 265 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCL-TGAKRDLEIL 441 P+ K+RKFSA +WE+ R + + E+A S++ + R++ + T KRD L Sbjct: 106 PSLKRRKFSAGTWEDVRREFVQPVSYESAASSAYNNLVPLTRSNAETSTSTSCKRDRSKL 165 Query: 442 -DDDIVFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 564 DDD VFMSR EIER SPSRKDGID+LRE++LRYSYCAFLQN Sbjct: 166 EDDDPVFMSRDEIERHSPSRKDGIDALRESHLRYSYCAFLQN 207 >emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera] Length = 443 Score = 164 bits (416), Expect(2) = 4e-47 Identities = 85/117 (72%), Positives = 96/117 (82%) Frame = +2 Query: 704 MVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQ 883 ++ATA+LFLAAKSEET RPLN+V+RASCEI HK L F LLPVDWFEQYRERV +AEQ Sbjct: 202 LIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQ 261 Query: 884 MILTTLNFELNVQHPYDPLTSVLSKLGLSQTVLVNLALCLVSEGXYTVFIFQILNYH 1054 MILTTL+FEL V+HPY PLTSVL+KLGLSQTVLVNLAL LVSEG + Q +H Sbjct: 262 MILTTLDFELTVEHPYVPLTSVLNKLGLSQTVLVNLALHLVSEGLRSSLWLQFKPHH 318 Score = 52.4 bits (124), Expect(2) = 4e-47 Identities = 24/49 (48%), Positives = 32/49 (65%) Frame = +1 Query: 1144 QFKPHHIXXXXXXXXXKILNFDLATHHGMWQEFQTTPSICQDVVKQLTE 1290 QFKPHHI KILN D+A++ +WQEFQTTP+I Q +++ E Sbjct: 313 QFKPHHIAAGAAYLAAKILNLDVASYQYIWQEFQTTPAILQGHLERKKE 361 Score = 114 bits (286), Expect = 8e-23 Identities = 62/102 (60%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Frame = +1 Query: 265 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCL-TGAKRDLEIL 441 P+ K+RKFSAS+WE+ +YQ+ +NAPST NS AP R + T KRD L Sbjct: 66 PSLKRRKFSASAWEDTGRHYQQQTTYDNAPSTCNSLVPAPTRPNANAYTSTSCKRDRSKL 125 Query: 442 -DDDIVFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 564 DDD+VFMSR EIER SPSRKDGID+LRE +LRYSYCAFLQN Sbjct: 126 EDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQN 167 >ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max] Length = 372 Score = 149 bits (376), Expect(2) = 1e-46 Identities = 79/117 (67%), Positives = 89/117 (76%) Frame = +2 Query: 704 MVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQ 883 ++ATAALFL AKSEE R LN+VLR S EI +KQ PVDWFEQYRERV +AEQ Sbjct: 211 LIATAALFLTAKSEEAPRHLNNVLRTSSEILYKQDFALLSYRFPVDWFEQYRERVLEAEQ 270 Query: 884 MILTTLNFELNVQHPYDPLTSVLSKLGLSQTVLVNLALCLVSEGXYTVFIFQILNYH 1054 +ILTTLNFELNVQHPY PLTSVL+KLGLS+TVLVNLAL LVSEG + Q +H Sbjct: 271 LILTTLNFELNVQHPYVPLTSVLNKLGLSKTVLVNLALNLVSEGLRSSLWLQFKPHH 327 Score = 65.9 bits (159), Expect(2) = 1e-46 Identities = 31/51 (60%), Positives = 34/51 (66%) Frame = +1 Query: 1144 QFKPHHIXXXXXXXXXKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 1296 QFKPHHI K LN DLA + +WQEFQTTPSI QDV +QL ELF Sbjct: 322 QFKPHHIAAGAAYLAAKFLNMDLAAYQNIWQEFQTTPSILQDVSQQLMELF 372 Score = 90.5 bits (223), Expect = 2e-15 Identities = 52/99 (52%), Positives = 63/99 (63%), Gaps = 2/99 (2%) Frame = +1 Query: 274 KKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCLTGA-KRDLEILDDD 450 K+RK+SA W+ + YY +N PS N F P R+D + + KRD I +DD Sbjct: 79 KRRKYSAPVWQESQQYYVPPMVHDNIPSAYN-FQGPPTRSDGDASTSASCKRDCSIFEDD 137 Query: 451 I-VFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 564 VFMSR EI+R SPSRKDGID ET+LRYSYCAFLQN Sbjct: 138 KPVFMSRDEIDRHSPSRKDGIDVHHETHLRYSYCAFLQN 176 >emb|CBI26220.3| unnamed protein product [Vitis vinifera] Length = 315 Score = 167 bits (423), Expect = 1e-38 Identities = 85/107 (79%), Positives = 94/107 (87%) Frame = +2 Query: 704 MVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQ 883 ++ATA+LFLAAKSEET RPLN+V+RASCEI HK L F LLPVDWFEQYRERV +AEQ Sbjct: 202 LIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQ 261 Query: 884 MILTTLNFELNVQHPYDPLTSVLSKLGLSQTVLVNLALCLVSEGXYT 1024 MILTTL+FEL V+HPY PLTSVL+KLGLSQTVLVNLAL LVSEG YT Sbjct: 262 MILTTLDFELTVEHPYVPLTSVLNKLGLSQTVLVNLALHLVSEGIYT 308 Score = 113 bits (282), Expect = 2e-22 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Frame = +1 Query: 265 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCL-TGAKRDLEIL 441 P+ K+RKFSAS+WE+ YQ+ +NAPST NS AP R + T KRD L Sbjct: 66 PSLKRRKFSASAWEDTGRRYQQQTTYDNAPSTCNSLVPAPTRPNANAYTSTSCKRDRSKL 125 Query: 442 -DDDIVFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 564 DDD+VFMSR EIER SPSRKDGID+LRE +LRYSYCAFLQN Sbjct: 126 EDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQN 167