BLASTX nr result

ID: Coptis24_contig00005130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005130
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318095.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>ref|XP_002318095.1| predicted protein [Populus trichocarpa] gi|222858768|gb|EEE96315.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 20/109 (18%)
 Frame = -3

Query: 581 LFNKLMKKSSSLRSITSLNKLQSPKLSTPLILVRQ-----PRLNEAKPNNNPSDKM---- 429
           L +K    + SLR ITS   L++P+LS P  L        P   ++  +NNP   +    
Sbjct: 8   LISKTTPTTPSLRIITST--LKTPQLSDPNYLTATTTSLLPSTTKSDFSNNPIPLLNPIP 65

Query: 428 --------YFYPSFPFGYFLDPISVNGVNQ---LDEVVEDVQTIWADSV 315
                   ++YPSFPFG+ L+PIS  G  Q   ++E V+D +T+WADSV
Sbjct: 66  TQDVKPLQFYYPSFPFGFCLNPISATGFGQVKAMEEDVDDSRTLWADSV 114


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