BLASTX nr result
ID: Coptis24_contig00005130
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005130 (709 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318095.1| predicted protein [Populus trichocarpa] gi|2... 59 1e-06 >ref|XP_002318095.1| predicted protein [Populus trichocarpa] gi|222858768|gb|EEE96315.1| predicted protein [Populus trichocarpa] Length = 139 Score = 58.9 bits (141), Expect = 1e-06 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 20/109 (18%) Frame = -3 Query: 581 LFNKLMKKSSSLRSITSLNKLQSPKLSTPLILVRQ-----PRLNEAKPNNNPSDKM---- 429 L +K + SLR ITS L++P+LS P L P ++ +NNP + Sbjct: 8 LISKTTPTTPSLRIITST--LKTPQLSDPNYLTATTTSLLPSTTKSDFSNNPIPLLNPIP 65 Query: 428 --------YFYPSFPFGYFLDPISVNGVNQ---LDEVVEDVQTIWADSV 315 ++YPSFPFG+ L+PIS G Q ++E V+D +T+WADSV Sbjct: 66 TQDVKPLQFYYPSFPFGFCLNPISATGFGQVKAMEEDVDDSRTLWADSV 114