BLASTX nr result
ID: Coptis24_contig00005120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005120 (2089 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 792 0.0 ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ... 789 0.0 sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 780 0.0 ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 778 0.0 ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 776 0.0 >ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis sativus] gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis sativus] Length = 505 Score = 792 bits (2045), Expect = 0.0 Identities = 398/492 (80%), Positives = 431/492 (87%), Gaps = 6/492 (1%) Frame = +1 Query: 37 MSRYDNRSGDPSSYRPRTDSSL--GTTGF----EPPRSKKEYDXXXXXXXXXXKKIDLLD 198 MSRYD+RS DP+SYR R S G+TG+ SK +Y KK+DL D Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGYGGSTGYGGSVRSSSSKSDY-----YGSEAPKKLDL-D 54 Query: 199 GLTHFEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEV 378 GL HFEKNFY E+PSVA+MT+ E+E YR +R+ITVEG+DVPKPV+ FRD+GFP+YVMQE+ Sbjct: 55 GLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEI 114 Query: 379 MKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPI 558 KAGF EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPI Sbjct: 115 AKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPI 174 Query: 559 VLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLI 738 VLVLAPTRELAVQIQQEATKFG+SSKIK+TC+YGGVPKGPQVRDLQKGVEIVIATPGRLI Sbjct: 175 VLVLAPTRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLI 234 Query: 739 DMMESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEIL 918 DMMESHHTNLRRVTYLVLDEADRMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE L Sbjct: 235 DMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQL 294 Query: 919 ARQFLYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTK 1098 ARQFLYNPYKV+IGS DLKANHAI QHV+IVSENQKY KLV L+EDIMDGSRIL+FMDTK Sbjct: 295 ARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTK 354 Query: 1099 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK 1278 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVK Sbjct: 355 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVK 414 Query: 1279 YVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPEL 1458 YVINYDFPGSLEDYVH FFTAANARFAKELI ILEEAGQKV+PEL Sbjct: 415 YVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPEL 474 Query: 1459 AKMGRGVPPPPT 1494 A MGRG PPPP+ Sbjct: 475 AAMGRGAPPPPS 486 >ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 505 Score = 789 bits (2037), Expect = 0.0 Identities = 395/487 (81%), Positives = 429/487 (88%), Gaps = 1/487 (0%) Frame = +1 Query: 37 MSRYDNRSGDPSSYRPR-TDSSLGTTGFEPPRSKKEYDXXXXXXXXXXKKIDLLDGLTHF 213 MSRYD+RSGDP+SYR R +DS G + + +K DL DGLT F Sbjct: 1 MSRYDSRSGDPTSYRDRRSDSGFGGALAYGGSGRSSSERREYDRAISPRKSDL-DGLTPF 59 Query: 214 EKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAGF 393 EKNFY ESPSVA+M++ E+E YR +R+ITVEG+DVPKPV+ FRD+GFP+YV++EV +AGF Sbjct: 60 EKNFYVESPSVAAMSEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGF 119 Query: 394 VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLA 573 VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLA Sbjct: 120 VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLA 179 Query: 574 PTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES 753 PTRELAVQIQQEATKFG+SS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ES Sbjct: 180 PTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239 Query: 754 HHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQFL 933 HHTNLRRVTYLVLDEADRMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE LARQFL Sbjct: 240 HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFL 299 Query: 934 YNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCDQ 1113 YNPYKVVIGS+DLKANHAI QHV+IVSENQKY KLV L+EDIMDGSRIL+FMDTKKGCDQ Sbjct: 300 YNPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 359 Query: 1114 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINY 1293 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINY Sbjct: 360 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINY 419 Query: 1294 DFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMGR 1473 DFPGSLEDYVH FFTA+NARFAKELI ILEEAGQKV+PELA MGR Sbjct: 420 DFPGSLEDYVHRIGRTGRAGAKGTAYTFFTASNARFAKELISILEEAGQKVSPELAAMGR 479 Query: 1474 GVPPPPT 1494 G PPPP+ Sbjct: 480 GAPPPPS 486 >sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20 Length = 494 Score = 780 bits (2013), Expect = 0.0 Identities = 394/487 (80%), Positives = 422/487 (86%), Gaps = 3/487 (0%) Frame = +1 Query: 37 MSRYDNRSGDPSSYRPRTDSSL---GTTGFEPPRSKKEYDXXXXXXXXXXKKIDLLDGLT 207 MSR+D R+ DP SYR R GT F P SK + LDGL Sbjct: 1 MSRFDGRAADPGSYRDRRSEGAFGGGTRAFAPT-SKADSAAAAAD----------LDGLP 49 Query: 208 HFEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKA 387 FEKNFY ESPSVA MT+EE+EAYR +R+ITVEG+DVPKPVREFRD+GFPEYV+QE+ KA Sbjct: 50 RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKA 109 Query: 388 GFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLV 567 GFVEPTPIQ+QGWPMAL+GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLV Sbjct: 110 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLV 169 Query: 568 LAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMM 747 LAPTRELAVQIQQEATKFG+SSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ Sbjct: 170 LAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMI 229 Query: 748 ESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQ 927 ESHHTNLRRVTYLVLDEADRMLDMGFEPQ+KKIVSQIRPDRQTLYWSATWPKEVE LAR Sbjct: 230 ESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARN 289 Query: 928 FLYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGC 1107 FL++PYKV+IGS +LKANHAI QHVEI+SE+QKY KLV+L+EDIMDGSRIL+FMDTKKGC Sbjct: 290 FLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGC 349 Query: 1108 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVI 1287 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVI Sbjct: 350 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVI 409 Query: 1288 NYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKM 1467 NYDFPGSLEDYVH FFTAANARFAK+LI ILEEAGQKV+PELA M Sbjct: 410 NYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANM 469 Query: 1468 GRGVPPP 1488 GRG PPP Sbjct: 470 GRGAPPP 476 >ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine max] Length = 507 Score = 778 bits (2008), Expect = 0.0 Identities = 389/488 (79%), Positives = 424/488 (86%), Gaps = 2/488 (0%) Frame = +1 Query: 37 MSRYDNRSGDPSSYRPR-TDSSLGT-TGFEPPRSKKEYDXXXXXXXXXXKKIDLLDGLTH 210 MSRYD+RSGDP+SYR R +DS LG TGF + K+ LDGL H Sbjct: 1 MSRYDSRSGDPTSYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPH 60 Query: 211 FEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAG 390 FEKNFY ESP+V +MTD E+ YR +R+ITVEG+D+PKPV+ F D GFPEYVM+E+ KAG Sbjct: 61 FEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAG 120 Query: 391 FVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVL 570 F EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLP+IVHVNAQPIL PGDGPIVLVL Sbjct: 121 FTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQPILNPGDGPIVLVL 180 Query: 571 APTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMME 750 APTRELAVQIQQEATKFG+SS+IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+E Sbjct: 181 APTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 240 Query: 751 SHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQF 930 S+HTNL+RVTYLVLDEADRMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE LAR+F Sbjct: 241 SNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKF 300 Query: 931 LYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCD 1110 LYNPYKV+IGSSDLKANHAI Q+V+IVSE QKY KLV L+EDIMDGSRIL+FMDTKKGCD Sbjct: 301 LYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCD 360 Query: 1111 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVIN 1290 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVIN Sbjct: 361 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN 420 Query: 1291 YDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMG 1470 YDFPGSLEDYVH +FTAANARFAKELI ILEEAGQKV+PELA MG Sbjct: 421 YDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMG 480 Query: 1471 RGVPPPPT 1494 RG PPPP+ Sbjct: 481 RGAPPPPS 488 >ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera] gi|297743075|emb|CBI35942.3| unnamed protein product [Vitis vinifera] Length = 506 Score = 776 bits (2005), Expect = 0.0 Identities = 391/493 (79%), Positives = 424/493 (86%), Gaps = 7/493 (1%) Frame = +1 Query: 37 MSRYDNRSGDPSSYRPRTDSS-------LGTTGFEPPRSKKEYDXXXXXXXXXXKKIDLL 195 MSRYD RSGDP SYR R S G+ G SK++ D +K DL Sbjct: 1 MSRYDGRSGDPGSYRDRRSESGFGGASGYGSGGVRSSSSKRDLDGVESP-----RKPDL- 54 Query: 196 DGLTHFEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQE 375 DGLT FEKNFY ESP+VA+M+++E+E YR +R+ITVEG+DVPKPV FRD+G PEYVMQE Sbjct: 55 DGLTPFEKNFYVESPAVAAMSEKEVEQYRERREITVEGRDVPKPVMNFRDVGLPEYVMQE 114 Query: 376 VMKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGP 555 + KAGF EPTPIQAQGWPMALKGRD+IGIAETGSGKTLAYLLPAI+HVNAQPILAPGDGP Sbjct: 115 ITKAGFAEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYLLPAIIHVNAQPILAPGDGP 174 Query: 556 IVLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRL 735 IVLVLAPTRELAVQIQQEA KFG+SS+IK+TCI+GGVPKGPQ+RDLQKGVEIVIATPGRL Sbjct: 175 IVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIHGGVPKGPQIRDLQKGVEIVIATPGRL 234 Query: 736 IDMMESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEI 915 IDM+ESHHTNLRRVTYLVLDEADRMLDMGFEPQ++KIVSQIRPDRQTLYWSATWPKEVE Sbjct: 235 IDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQ 294 Query: 916 LARQFLYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDT 1095 LAR+FLYNP KVVIGS+DLKANHAI QHVEIVSENQKY +LV L+EDIMDG RIL+FMDT Sbjct: 295 LARKFLYNPCKVVIGSADLKANHAIRQHVEIVSENQKYNRLVKLLEDIMDGGRILIFMDT 354 Query: 1096 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDV 1275 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDV Sbjct: 355 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDV 414 Query: 1276 KYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPE 1455 K+VINYDFPGSLEDYVH FFTAANARFAKELI ILEEAGQ+V PE Sbjct: 415 KFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVAPE 474 Query: 1456 LAKMGRGVPPPPT 1494 LA MGRG PPPP+ Sbjct: 475 LAAMGRGAPPPPS 487