BLASTX nr result
ID: Coptis24_contig00005103
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005103 (1655 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK92544.1| unknown [Populus trichocarpa] 633 e-179 ref|XP_002512633.1| pyruvate dehydrogenase, putative [Ricinus co... 633 e-179 ref|XP_002304661.1| predicted protein [Populus trichocarpa] gi|2... 632 e-179 ref|NP_001105506.1| pyruvate dehydrogenase E1 beta subunit isofo... 632 e-179 ref|XP_002297861.1| predicted protein [Populus trichocarpa] gi|2... 631 e-178 >gb|ABK92544.1| unknown [Populus trichocarpa] Length = 373 Score = 633 bits (1633), Expect = e-179 Identities = 319/373 (85%), Positives = 346/373 (92%), Gaps = 4/373 (1%) Frame = -1 Query: 1481 MLGLLKLKFTNPGGVT----SLIRPAVIASRCYATGAKEMTVRDALNSALDEEMSADPTV 1314 M G+++ K + G IRPAV A R Y++ AKE+TVR+ALNSALDEEMSADP V Sbjct: 1 MFGIVRQKISAGGSPLLAFGQRIRPAVSAWRGYSSAAKEITVREALNSALDEEMSADPKV 60 Query: 1313 FVMGEEVGEYQGAYKITKGLLDKYGPDRVVDTPITEAGFAGIGVGAAYHGLRPVVEFMTF 1134 F+MGEEVGEYQGAYKI+KGLLDKYGP+RV+DTPITEAGF GIGVGAAYHGL+PV+EFMTF Sbjct: 61 FLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFTGIGVGAAYHGLKPVIEFMTF 120 Query: 1133 NFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWFGSCPGLK 954 NFSMQAIDHIINSAAKSNYMS+GQISVPIVFRGPNGAAAGVGAQHS CYA+W+ SCPGLK Sbjct: 121 NFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYASWYASCPGLK 180 Query: 953 VLVPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIERE 774 VL PYSSEDARGLLKAAIRDPDPVVFLENELLYGE+FPVSAEVLDSSFC+PIGKAKIERE Sbjct: 181 VLAPYSSEDARGLLKAAIRDPDPVVFLENELLYGETFPVSAEVLDSSFCVPIGKAKIERE 240 Query: 773 GKDITITAFSKMVSYALQAAEILSKEGISAEVINLRSIRPLDRNTINTSVRKTNRLVTVE 594 GKD+TITAFSKMV YAL+AAEIL+KEGI+AEVINLRSIRPLDR+TIN SVRKTNRLVTVE Sbjct: 241 GKDVTITAFSKMVGYALKAAEILAKEGINAEVINLRSIRPLDRDTINASVRKTNRLVTVE 300 Query: 593 EGFPQHGVGAEICASVLEESFEYLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAK 414 EGFPQHGVGAEICASV+EESF YLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAK Sbjct: 301 EGFPQHGVGAEICASVVEESFGYLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAK 360 Query: 413 RACHRSIPMAAVA 375 RAC+RS+PMAA A Sbjct: 361 RACYRSVPMAAAA 373 >ref|XP_002512633.1| pyruvate dehydrogenase, putative [Ricinus communis] gi|223548594|gb|EEF50085.1| pyruvate dehydrogenase, putative [Ricinus communis] Length = 368 Score = 633 bits (1632), Expect = e-179 Identities = 321/370 (86%), Positives = 344/370 (92%), Gaps = 1/370 (0%) Frame = -1 Query: 1481 MLGLLKLKFTNPGGVTSLIRPAVIAS-RCYATGAKEMTVRDALNSALDEEMSADPTVFVM 1305 MLG++K K G IRPAV ++ R Y++ AKEMTVR+ALNSALDEEMSADP VF+M Sbjct: 1 MLGIIKQKAL--GKSLQRIRPAVASAWRAYSSAAKEMTVREALNSALDEEMSADPKVFLM 58 Query: 1304 GEEVGEYQGAYKITKGLLDKYGPDRVVDTPITEAGFAGIGVGAAYHGLRPVVEFMTFNFS 1125 GEEVGEYQGAYKITKGLLDKYGP+RV+DTPITEAGF GIGVGAAYHGL+PVVEFMTFNFS Sbjct: 59 GEEVGEYQGAYKITKGLLDKYGPERVLDTPITEAGFTGIGVGAAYHGLKPVVEFMTFNFS 118 Query: 1124 MQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWFGSCPGLKVLV 945 MQAIDHIINSAAKS YMSAGQ+SVPIVFRGPNGAAAGVGAQHSQCYA+W+ SCPGLKVL Sbjct: 119 MQAIDHIINSAAKSTYMSAGQLSVPIVFRGPNGAAAGVGAQHSQCYASWYASCPGLKVLA 178 Query: 944 PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD 765 PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFC PIGKAKIEREGKD Sbjct: 179 PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCTPIGKAKIEREGKD 238 Query: 764 ITITAFSKMVSYALQAAEILSKEGISAEVINLRSIRPLDRNTINTSVRKTNRLVTVEEGF 585 +TITAFSKMV YAL+AAE+L+KEGISAEVINLRSIRPLDR TIN SVRKTNRLVTVEEGF Sbjct: 239 VTITAFSKMVGYALKAAELLAKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGF 298 Query: 584 PQHGVGAEICASVLEESFEYLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRAC 405 PQHGVGAEICASV+E+SF YLDAPVERIAGADVPMPYAANLER+AVPQVEDIVRAAKRAC Sbjct: 299 PQHGVGAEICASVIEDSFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 358 Query: 404 HRSIPMAAVA 375 +RS+P AA A Sbjct: 359 YRSVPTAATA 368 >ref|XP_002304661.1| predicted protein [Populus trichocarpa] gi|222842093|gb|EEE79640.1| predicted protein [Populus trichocarpa] Length = 351 Score = 632 bits (1631), Expect = e-179 Identities = 315/351 (89%), Positives = 338/351 (96%) Frame = -1 Query: 1427 IRPAVIASRCYATGAKEMTVRDALNSALDEEMSADPTVFVMGEEVGEYQGAYKITKGLLD 1248 IRPAV A R Y++ AKE+TVR+ALNSALDEEMSADP VF+MGEEVGEYQGAYKI+KGLLD Sbjct: 1 IRPAVSAWRGYSSAAKEITVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLD 60 Query: 1247 KYGPDRVVDTPITEAGFAGIGVGAAYHGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSA 1068 KYGP+RV+DTPITEAGF GIGVGAAYHGL+PV+EFMTFNFSMQAIDHIINSAAKSNYMS+ Sbjct: 61 KYGPERVLDTPITEAGFTGIGVGAAYHGLKPVIEFMTFNFSMQAIDHIINSAAKSNYMSS 120 Query: 1067 GQISVPIVFRGPNGAAAGVGAQHSQCYAAWFGSCPGLKVLVPYSSEDARGLLKAAIRDPD 888 GQISVPIVFRGPNGAAAGVGAQHS CYA+W+ SCPGLKVL PYSSEDARGLLKAAIRDPD Sbjct: 121 GQISVPIVFRGPNGAAAGVGAQHSHCYASWYASCPGLKVLAPYSSEDARGLLKAAIRDPD 180 Query: 887 PVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDITITAFSKMVSYALQAAEI 708 PVVFLENELLYGE+FPVSAEVLDSSFC+PIGKAKIEREGKD+TITAFSKMV YAL+AAEI Sbjct: 181 PVVFLENELLYGETFPVSAEVLDSSFCVPIGKAKIEREGKDVTITAFSKMVGYALKAAEI 240 Query: 707 LSKEGISAEVINLRSIRPLDRNTINTSVRKTNRLVTVEEGFPQHGVGAEICASVLEESFE 528 L+KEGI+AEVINLRSIRPLDR+TIN SVRKTNRLVTVEEGFPQHGVGAEICASV+EESF Sbjct: 241 LAKEGINAEVINLRSIRPLDRDTINASVRKTNRLVTVEEGFPQHGVGAEICASVVEESFG 300 Query: 527 YLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRACHRSIPMAAVA 375 YLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRAC+RS+PMAA A Sbjct: 301 YLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRACYRSVPMAAAA 351 >ref|NP_001105506.1| pyruvate dehydrogenase E1 beta subunit isoform 2 [Zea mays] gi|3851001|gb|AAC72193.1| pyruvate dehydrogenase E1 beta subunit isoform 2 [Zea mays] gi|414589935|tpg|DAA40506.1| TPA: Pyruvate dehydrogenase E1 beta subunit isoform 3 [Zea mays] Length = 374 Score = 632 bits (1630), Expect = e-179 Identities = 318/359 (88%), Positives = 337/359 (93%), Gaps = 2/359 (0%) Frame = -1 Query: 1445 GGVTSLIRPAVIA--SRCYATGAKEMTVRDALNSALDEEMSADPTVFVMGEEVGEYQGAY 1272 G V +RPAV A +R Y+ AKEMTVRDALNSALDEEMSADP+VF+MGEEVGEYQGAY Sbjct: 16 GQVLRRLRPAVAAEVARGYSAAAKEMTVRDALNSALDEEMSADPSVFLMGEEVGEYQGAY 75 Query: 1271 KITKGLLDKYGPDRVVDTPITEAGFAGIGVGAAYHGLRPVVEFMTFNFSMQAIDHIINSA 1092 KI+KGLLD+YGPDRV+DTPITEAGF GIGVGAAYHGLRP++EFMTFNFSMQAIDHIINSA Sbjct: 76 KISKGLLDRYGPDRVLDTPITEAGFTGIGVGAAYHGLRPIIEFMTFNFSMQAIDHIINSA 135 Query: 1091 AKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWFGSCPGLKVLVPYSSEDARGLL 912 AKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWF PGLKVL PYSSEDARGLL Sbjct: 136 AKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWFAHVPGLKVLTPYSSEDARGLL 195 Query: 911 KAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDITITAFSKMVS 732 KAAIRDPDPV+FLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD+TITAFSKMV Sbjct: 196 KAAIRDPDPVIFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKMVG 255 Query: 731 YALQAAEILSKEGISAEVINLRSIRPLDRNTINTSVRKTNRLVTVEEGFPQHGVGAEICA 552 YALQAAEILSKEGISAEVINLRSIRPLDR IN SVRKTNRLVTVEEGFPQHG+GAEIC Sbjct: 256 YALQAAEILSKEGISAEVINLRSIRPLDRAAINASVRKTNRLVTVEEGFPQHGIGAEICM 315 Query: 551 SVLEESFEYLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRACHRSIPMAAVA 375 SV+EESF YLDAPVERIAGADVPMPYAANLER+AVPQV+DIVRAAKRAC+R++PMAA A Sbjct: 316 SVVEESFAYLDAPVERIAGADVPMPYAANLERMAVPQVDDIVRAAKRACYRAVPMAAAA 374 >ref|XP_002297861.1| predicted protein [Populus trichocarpa] gi|222845119|gb|EEE82666.1| predicted protein [Populus trichocarpa] Length = 358 Score = 631 bits (1628), Expect = e-178 Identities = 319/363 (87%), Positives = 340/363 (93%) Frame = -1 Query: 1481 MLGLLKLKFTNPGGVTSLIRPAVIASRCYATGAKEMTVRDALNSALDEEMSADPTVFVMG 1302 MLG+++ K IRPAV A R Y++ AKEMTVR+ALNSALDEEMSADP VF+MG Sbjct: 1 MLGIIRQK-----AFGQRIRPAVSAWRGYSSAAKEMTVREALNSALDEEMSADPKVFLMG 55 Query: 1301 EEVGEYQGAYKITKGLLDKYGPDRVVDTPITEAGFAGIGVGAAYHGLRPVVEFMTFNFSM 1122 EEVGEYQGAYKI+KGLLDKYGP+RV+DTPITEAGF GIGVGAAYHGL+PV+EFMTFNFSM Sbjct: 56 EEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFTGIGVGAAYHGLKPVIEFMTFNFSM 115 Query: 1121 QAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWFGSCPGLKVLVP 942 QAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHS CYAAW+ SCPGLKVL P Sbjct: 116 QAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASCPGLKVLAP 175 Query: 941 YSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDI 762 YSSEDARGLLKAAIRDPDPVVFLENELLYGE+FPVSAEVLDSSFCLPIGKAKIE+EGKD+ Sbjct: 176 YSSEDARGLLKAAIRDPDPVVFLENELLYGETFPVSAEVLDSSFCLPIGKAKIEKEGKDV 235 Query: 761 TITAFSKMVSYALQAAEILSKEGISAEVINLRSIRPLDRNTINTSVRKTNRLVTVEEGFP 582 TITAFSKMV YAL+AAEIL+KEGISAEVINLRSIRPLDRNTIN SVRKTNRLVTVEEGFP Sbjct: 236 TITAFSKMVGYALKAAEILAKEGISAEVINLRSIRPLDRNTINASVRKTNRLVTVEEGFP 295 Query: 581 QHGVGAEICASVLEESFEYLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRACH 402 QHGVGAEICASV+EESF YLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRAC+ Sbjct: 296 QHGVGAEICASVVEESFGYLDAPVERIAGADVPMPYAANLERLAVPQVEDIVRAAKRACY 355 Query: 401 RSI 393 RS+ Sbjct: 356 RSV 358