BLASTX nr result

ID: Coptis24_contig00005101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005101
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528989.1| conserved hypothetical protein [Ricinus comm...    55   7e-16
ref|XP_002276745.2| PREDICTED: uncharacterized protein LOC100252...    55   1e-15
ref|NP_195678.1| SAP domain-containing protein [Arabidopsis thal...    56   2e-15
ref|XP_002868923.1| hypothetical protein ARALYDRAFT_912451 [Arab...    56   4e-15
ref|XP_003602011.1| Apoptotic chromatin condensation inducer in ...    54   1e-14

>ref|XP_002528989.1| conserved hypothetical protein [Ricinus communis]
           gi|223531579|gb|EEF33408.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 661

 Score = 55.5 bits (132), Expect(2) = 7e-16
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = -3

Query: 120 EELKRRRLTTKGLKDDLIRRLDESLRAERDTQKEEEVS 7
           EELKRR+LTTKGLKDDLI+RLDE+LR ER+   ++ ++
Sbjct: 23  EELKRRKLTTKGLKDDLIKRLDEALRIERENNAKDVIT 60



 Score = 53.9 bits (128), Expect(2) = 7e-16
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 253 SSPYPVLDNKPIDQWKVTELKEELKRR 173
           SS YP+L+N+PIDQWKVTELKEELKRR
Sbjct: 2   SSKYPILENRPIDQWKVTELKEELKRR 28


>ref|XP_002276745.2| PREDICTED: uncharacterized protein LOC100252593 [Vitis vinifera]
          Length = 691

 Score = 54.7 bits (130), Expect(2) = 1e-15
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -2

Query: 253 SSPYPVLDNKPIDQWKVTELKEELKRR 173
           SSPY VLDN+PIDQW+VTELKEELKRR
Sbjct: 2   SSPYQVLDNRPIDQWRVTELKEELKRR 28



 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -3

Query: 120 EELKRRRLTTKGLKDDLIRRLDESLRAERDTQKEEEVSN 4
           EELKRR+LTTKGLK+DL++RLDE LR ER+   EE+V N
Sbjct: 23  EELKRRKLTTKGLKEDLVKRLDEVLRNERE-NAEEDVDN 60


>ref|NP_195678.1| SAP domain-containing protein [Arabidopsis thaliana]
           gi|145334269|ref|NP_001078515.1| SAP domain-containing
           protein [Arabidopsis thaliana]
           gi|3080437|emb|CAA18754.1| putative protein [Arabidopsis
           thaliana] gi|7270952|emb|CAB80631.1| putative protein
           [Arabidopsis thaliana] gi|332661703|gb|AEE87103.1| SAP
           domain-containing protein [Arabidopsis thaliana]
           gi|332661704|gb|AEE87104.1| SAP domain-containing
           protein [Arabidopsis thaliana]
          Length = 633

 Score = 56.2 bits (134), Expect(2) = 2e-15
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -2

Query: 256 TSSPYPVLDNKPIDQWKVTELKEELKRR 173
           +SSP+PVLDN+PID+WKVTELKEELKRR
Sbjct: 2   SSSPFPVLDNRPIDKWKVTELKEELKRR 29



 Score = 52.0 bits (123), Expect(2) = 2e-15
 Identities = 23/30 (76%), Positives = 30/30 (100%)
 Frame = -3

Query: 120 EELKRRRLTTKGLKDDLIRRLDESLRAERD 31
           EELKRRRLTT+GLK++L+RRLDE+LRAE++
Sbjct: 24  EELKRRRLTTRGLKEELVRRLDEALRAEQE 53


>ref|XP_002868923.1| hypothetical protein ARALYDRAFT_912451 [Arabidopsis lyrata subsp.
           lyrata] gi|297314759|gb|EFH45182.1| hypothetical protein
           ARALYDRAFT_912451 [Arabidopsis lyrata subsp. lyrata]
          Length = 639

 Score = 56.2 bits (134), Expect(2) = 4e-15
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -2

Query: 256 TSSPYPVLDNKPIDQWKVTELKEELKRR 173
           +SSP+PVLDN+PID+WKVTELKEELKRR
Sbjct: 2   SSSPFPVLDNRPIDKWKVTELKEELKRR 29



 Score = 50.4 bits (119), Expect(2) = 4e-15
 Identities = 22/30 (73%), Positives = 29/30 (96%)
 Frame = -3

Query: 120 EELKRRRLTTKGLKDDLIRRLDESLRAERD 31
           EELKRRRLTT+GLK++L+RRLDE+LR E++
Sbjct: 24  EELKRRRLTTRGLKEELVRRLDEALRVEQE 53


>ref|XP_003602011.1| Apoptotic chromatin condensation inducer in the nucleus [Medicago
           truncatula] gi|355491059|gb|AES72262.1| Apoptotic
           chromatin condensation inducer in the nucleus [Medicago
           truncatula]
          Length = 720

 Score = 54.3 bits (129), Expect(2) = 1e-14
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = -2

Query: 262 MKTSSPYPVLDNKPIDQWKVTELKEELKRR 173
           M ++S YP+LD+KPID+WKVTELKEELKRR
Sbjct: 1   MSSNSKYPILDDKPIDKWKVTELKEELKRR 30



 Score = 50.8 bits (120), Expect(2) = 1e-14
 Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 5/43 (11%)
 Frame = -3

Query: 120 EELKRRRLTTKGLKDDLIRRLDESLRAERDT-----QKEEEVS 7
           EELKRR+L TKGLK+DLI RLDE+LR ER+      +KE+E +
Sbjct: 25  EELKRRKLVTKGLKEDLINRLDEALREEREAAEAARKKEQEAA 67


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