BLASTX nr result

ID: Coptis24_contig00005100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005100
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301659.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002334156.1| cc-nbs-lrr resistance protein [Populus trich...    57   2e-06
ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichoca...    55   8e-06
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    54   1e-05

>ref|XP_002301659.1| predicted protein [Populus trichocarpa] gi|222843385|gb|EEE80932.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = +1

Query: 1   QLEIWDCPELEVMSVDFQHLISLQDLQLVWLPQLTSLPEEIQHARRLQTLEIEGCENLRK 180
           +L +  C +   +S   QHL  L+DL+LV  P+L SLPE IQH   L++L IEGC NL+K
Sbjct: 173 KLSVVGCDKFTSLSEGVQHLTVLEDLELVNCPELNSLPESIQHLTSLRSLFIEGCPNLKK 232


>ref|XP_002334156.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869855|gb|EEF06986.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 826

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +1

Query: 1   QLEIWDCPELEVMSVDFQHLISLQDLQLVWLPQLTSLPEEIQHARRLQTLEIEGCENLRK 180
           +L +  C +   +S   +HL +L+DL+L   P+L SLPE IQH   LQ+L I GC NL+K
Sbjct: 740 KLYVLGCDKFTSLSEGVRHLTALEDLELYGCPELNSLPESIQHLTSLQSLIIRGCPNLKK 799


>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/57 (50%), Positives = 34/57 (59%)
 Frame = +1

Query: 4   LEIWDCPELEVMSVDFQHLISLQDLQLVWLPQLTSLPEEIQHARRLQTLEIEGCENL 174
           L+I DC EL  +S   QHL +L+DL L    +L SLPE IQH   L  L I GC NL
Sbjct: 342 LDILDCQELTSISEGLQHLTALKDLYLHGCVKLNSLPESIQHLTSLSRLRIHGCSNL 398


>ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844656|gb|EEE82203.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1088

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +1

Query: 1    QLEIWDCPELEVMSVDFQHLISLQDLQLVWLPQLTSLPEEIQHARRLQTLEIEGCENLRK 180
            +L+I  C +   ++   +HL +L+DL+L   P+L SLPE IQH   LQ+L I GC NL+K
Sbjct: 1002 RLKIQYCDKFTSLTEGVRHLTALEDLELGNCPELNSLPESIQHLTSLQSLFISGCPNLKK 1061


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1075

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 27/60 (45%), Positives = 36/60 (60%)
 Frame = +1

Query: 1    QLEIWDCPELEVMSVDFQHLISLQDLQLVWLPQLTSLPEEIQHARRLQTLEIEGCENLRK 180
            +L +  C +   +S   +HL +L+DL L   P+L SLPE IQH   LQ L I GC NL+K
Sbjct: 994  KLVVGSCDKFTSLSEGVRHLTALEDLHLDGCPELNSLPESIQHLTSLQYLSIWGCPNLKK 1053


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