BLASTX nr result

ID: Coptis24_contig00005098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005098
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  562   e-158
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   556   e-156
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   549   e-154
ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|2...   544   e-152
ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|2...   524   e-146

>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  562 bits (1449), Expect = e-158
 Identities = 288/397 (72%), Positives = 325/397 (81%), Gaps = 12/397 (3%)
 Frame = -1

Query: 1472 QNLLTTFPKSGTPLQSANSPFIVPSPSTPLAPSPIPGDTEKQASGISSLSNTGHVGHPQP 1293
            QNLL +  KSGTPLQS NSPF+VPSPSTP+APSP+PGD+EK  SGISSLSN G++GH Q 
Sbjct: 1009 QNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNAGNIGHQQT 1068

Query: 1292 TAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG------------TEQPLERLLKAVKA 1149
            T+  A A SLAIGTPGISASPLLAEFT  D   G            TEQPLERL+KAVK+
Sbjct: 1069 TSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLERLIKAVKS 1128

Query: 1148 ISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGEDLVAMTKCRMQARNFISQDGVS 969
            +SPKA SASVSDIGSV+SMIDRIAGSAPGNGSRAAVGEDLVAMTKCR+QARNFI+QDG S
Sbjct: 1129 MSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITQDGSS 1188

Query: 968  ATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSELESTATSRIKRPRVEANHALLEE 789
              +KMRR TSAMPL+ VSSAGS+NDS KQ    E S+LESTATS IKRPR+EANHALLEE
Sbjct: 1189 GPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRMEANHALLEE 1248

Query: 788  IKEINQRLIDTVVDISDEDVDPTVXXXXAEGGQGIIVKCSFNAVSLSPNLKTQYASAQMT 609
            I+EINQRLIDTVVDISDED DPT      EGG+G +VKCSF+AV+LSPNLK+QYASAQM+
Sbjct: 1249 IREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKSQYASAQMS 1308

Query: 608  PIHPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKTXXXXXXXXXXXSQPMSLKEMV 429
            PI PL+LL+PTNYPNCSP+LLDK P+++SKE EDLSVK            SQPMSL E+ 
Sbjct: 1309 PIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIA 1368

Query: 428  RTWDICARAAISDYAQQHGGGSFSSRYGTWEKCVSAA 318
            RTWD+CAR  IS+YAQQ GGGSFSS+YGTWE C+SAA
Sbjct: 1369 RTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSAA 1405


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  556 bits (1433), Expect = e-156
 Identities = 286/397 (72%), Positives = 327/397 (82%), Gaps = 12/397 (3%)
 Frame = -1

Query: 1472 QNLLTTFPKSGTPLQSANSPFIVPSPSTPLAPSPIPGDTEKQASGISSLSNTGHVGHPQP 1293
            QNLL++  K+GTPLQSANSPF+V SPSTPLAPSP+PGD+EK  +GISSLSN G++G  Q 
Sbjct: 986  QNLLSSLTKTGTPLQSANSPFVVQSPSTPLAPSPMPGDSEKPITGISSLSNAGNIGQQQA 1045

Query: 1292 TAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG------------TEQPLERLLKAVKA 1149
            T   AP  SLAIGTPGISASPLLAEFT +D                TEQPLERL+KAVK+
Sbjct: 1046 TVAQAPVPSLAIGTPGISASPLLAEFTGSDVGLANTLTTASGKSTVTEQPLERLIKAVKS 1105

Query: 1148 ISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGEDLVAMTKCRMQARNFISQDGVS 969
            +SPKA SASVSDIGSV+SMIDRIA SAPGNGSRAAVGEDLVAMT CR+QARNFI+QDG+S
Sbjct: 1106 MSPKALSASVSDIGSVVSMIDRIASSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGMS 1165

Query: 968  ATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSELESTATSRIKRPRVEANHALLEE 789
             T+KMRR TSAMPLN VSSA S++DS KQ N  E SELESTATS +KRPR+EANHALLEE
Sbjct: 1166 GTRKMRRYTSAMPLNVVSSASSISDSFKQFNGAETSELESTATSSVKRPRLEANHALLEE 1225

Query: 788  IKEINQRLIDTVVDISDEDVDPTVXXXXAEGGQGIIVKCSFNAVSLSPNLKTQYASAQMT 609
            I+EINQRLIDTVVDIS+EDVDPT     A GG+G IVKCSF+AV+LSPNLK+QYASAQM+
Sbjct: 1226 IREINQRLIDTVVDISEEDVDPTAGAATAGGGEGTIVKCSFSAVALSPNLKSQYASAQMS 1285

Query: 608  PIHPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKTXXXXXXXXXXXSQPMSLKEMV 429
            PI PL+LL+PTNYPNCSP+LLDKLP+++SKE EDLSVK            SQPMSL E+ 
Sbjct: 1286 PIQPLRLLVPTNYPNCSPILLDKLPVEVSKEYEDLSVKAKSRFNISLRSLSQPMSLGEIA 1345

Query: 428  RTWDICARAAISDYAQQHGGGSFSSRYGTWEKCVSAA 318
            RTWD+CARA IS++AQQ GGGSFSS+YGTWE C+SAA
Sbjct: 1346 RTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSAA 1382


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score =  549 bits (1415), Expect = e-154
 Identities = 285/398 (71%), Positives = 321/398 (80%), Gaps = 13/398 (3%)
 Frame = -1

Query: 1472 QNLLTTFPKSGTPLQSANSPFIVPSPSTPLAPSPIPGDTEKQASGISSLSNTGHVGHPQP 1293
            QNLLT+  K+GTPLQSANSPF+VPSPSTPLAPSP+PG++EK  SGIS ++N G++GH Q 
Sbjct: 1274 QNLLTSLTKAGTPLQSANSPFVVPSPSTPLAPSPMPGESEKLNSGISLITNAGNIGHHQT 1333

Query: 1292 TAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG------------TEQPLERLLKAVKA 1149
            T  LAP  SLAIGTPGISASPLLAEFT+ D N G            TEQPLERL+K VK 
Sbjct: 1334 TGALAPPPSLAIGTPGISASPLLAEFTSLDGNHGNASTMVSGKSSVTEQPLERLIKVVKL 1393

Query: 1148 ISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGEDLVAMTKCRMQARNFISQDGVS 969
            +SPKA SASVSDIGSV+SMIDRIAGSAPGNGSRAAVGEDLVAMTKCR+QARNFI+ DG +
Sbjct: 1394 MSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITLDGAA 1453

Query: 968  ATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSELESTATSRIKRPRVEANHALLEE 789
             T+KMRR TSAMPLN VSSAGSVNDS KQ    E S+LESTATS  KRPR+E NHALLEE
Sbjct: 1454 GTRKMRRYTSAMPLNVVSSAGSVNDSFKQLAGSETSDLESTATSSAKRPRIEVNHALLEE 1513

Query: 788  IKEINQRLIDTVVDISDEDVDP-TVXXXXAEGGQGIIVKCSFNAVSLSPNLKTQYASAQM 612
            I+EINQRLIDTVVDIS EDVDP       AEGG+G IVKCSF+AV+LSPNLK+QY S QM
Sbjct: 1514 IREINQRLIDTVVDISHEDVDPAAAAAAAAEGGEGTIVKCSFSAVALSPNLKSQYTSTQM 1573

Query: 611  TPIHPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKTXXXXXXXXXXXSQPMSLKEM 432
            +PI PL+LL+PTNYPN SP+LLDK P+++SKE EDLSVK            SQPMSL E+
Sbjct: 1574 SPIQPLRLLVPTNYPNSSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEI 1633

Query: 431  VRTWDICARAAISDYAQQHGGGSFSSRYGTWEKCVSAA 318
             RTWD+CARA IS+YAQQ GGGSFSSRYG WE C+SAA
Sbjct: 1634 ARTWDVCARAVISEYAQQSGGGSFSSRYGAWENCLSAA 1671


>ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|222835956|gb|EEE74377.1|
            predicted protein [Populus trichocarpa]
          Length = 1204

 Score =  544 bits (1401), Expect = e-152
 Identities = 278/397 (70%), Positives = 327/397 (82%), Gaps = 12/397 (3%)
 Frame = -1

Query: 1472 QNLLTTFPKSGTPLQSANSPFIVPSPSTPLAPSPIPGDTEKQASGISSLSNTGHVGHPQP 1293
            QNL ++  K+GTPLQSANSPF+VPSPSTPLAPSP+PGD++K  SGISSL NTG++ H QP
Sbjct: 809  QNLPSSVTKTGTPLQSANSPFVVPSPSTPLAPSPMPGDSDKPVSGISSLLNTGNIVH-QP 867

Query: 1292 TAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG------------TEQPLERLLKAVKA 1149
            +   APA SLAIGTPGISASPLLAEFT+ D   G            TEQPLERL+KAVK+
Sbjct: 868  SVAQAPAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSGKSNVTEQPLERLIKAVKS 927

Query: 1148 ISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGEDLVAMTKCRMQARNFISQDGVS 969
            +SPKA SASV DIGSV+SMIDRIAGSAPGNGSRAA GEDLVAMTKCR+QARN+I+QDG++
Sbjct: 928  LSPKALSASVGDIGSVVSMIDRIAGSAPGNGSRAAAGEDLVAMTKCRLQARNYITQDGMT 987

Query: 968  ATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSELESTATSRIKRPRVEANHALLEE 789
             ++KMRR TSAMPLN VSSAGSV+DS KQ    E S+LESTATS +KRPR+EANHALLEE
Sbjct: 988  GSRKMRRHTSAMPLNVVSSAGSVSDSFKQFTGPETSDLESTATSSVKRPRIEANHALLEE 1047

Query: 788  IKEINQRLIDTVVDISDEDVDPTVXXXXAEGGQGIIVKCSFNAVSLSPNLKTQYASAQMT 609
            I+EINQRLIDTVVDISDEDVD T     AEGG+G IVKCSF+AV+LS NLK+QYASAQM+
Sbjct: 1048 IREINQRLIDTVVDISDEDVDSTAVAATAEGGEGTIVKCSFSAVALSQNLKSQYASAQMS 1107

Query: 608  PIHPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKTXXXXXXXXXXXSQPMSLKEMV 429
            PI PL+LL+PTNYP+CSP+LLD+ P+++SKE EDLS+K            SQPMSL E+ 
Sbjct: 1108 PIQPLRLLVPTNYPSCSPILLDRFPVEVSKEYEDLSIKAKSRFSISLRSLSQPMSLGEIA 1167

Query: 428  RTWDICARAAISDYAQQHGGGSFSSRYGTWEKCVSAA 318
            RTWD+CAR  IS++AQQ GGG+FSS+YG+WE C+SAA
Sbjct: 1168 RTWDVCARVVISEHAQQSGGGTFSSKYGSWENCLSAA 1204


>ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|222845464|gb|EEE83011.1|
            predicted protein [Populus trichocarpa]
          Length = 772

 Score =  524 bits (1349), Expect = e-146
 Identities = 274/397 (69%), Positives = 313/397 (78%), Gaps = 12/397 (3%)
 Frame = -1

Query: 1472 QNLLTTFPKSGTPLQSANSPFIVPSPSTPLAPSPIPGDTEKQASGISSLSNTGHVGHPQP 1293
            QNLL +  K+GTPLQSANSPF+VPSPSTPLAPSP+PGD+EK  SGISS  N  H    QP
Sbjct: 382  QNLLPSLTKTGTPLQSANSPFVVPSPSTPLAPSPVPGDSEKPISGISS--NIVH----QP 435

Query: 1292 TAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG------------TEQPLERLLKAVKA 1149
            T   A A SLAIGTPGISASPLLAEFT+ D   G             EQPLER++KAVK+
Sbjct: 436  TVAQATAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSGKSNVMEQPLERMIKAVKS 495

Query: 1148 ISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGEDLVAMTKCRMQARNFISQDGVS 969
            +SPKA SASVSDIGSV+SMIDRIAGSAPGNGSRAAVGEDLVAMTKCR+QARNF +QDG++
Sbjct: 496  LSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFFTQDGMT 555

Query: 968  ATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSELESTATSRIKRPRVEANHALLEE 789
             +KKMRR TSAMPLN  SSAGSV+DS KQ    E S+LEST TS +KRP++EANHALLEE
Sbjct: 556  GSKKMRRHTSAMPLNVASSAGSVSDSFKQFTGPETSDLESTVTSSVKRPKIEANHALLEE 615

Query: 788  IKEINQRLIDTVVDISDEDVDPTVXXXXAEGGQGIIVKCSFNAVSLSPNLKTQYASAQMT 609
            I+EINQRL+DTVVDISDEDVD T     AEGG G  VKCSF AV+LSPNLK QY SAQM+
Sbjct: 616  IREINQRLLDTVVDISDEDVDSTAAAAAAEGGGGTFVKCSFIAVALSPNLKAQYTSAQMS 675

Query: 608  PIHPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKTXXXXXXXXXXXSQPMSLKEMV 429
             I PL+LL+PTNYPNCSP+LLDK P ++SKE EDLS+K            SQPMSL ++ 
Sbjct: 676  TIQPLRLLVPTNYPNCSPILLDKFPFEVSKEYEDLSIKAKFRFSISLRSLSQPMSLGDIA 735

Query: 428  RTWDICARAAISDYAQQHGGGSFSSRYGTWEKCVSAA 318
            RTWD+CA A IS++AQQ GGG+FSS+YG+WE CVSAA
Sbjct: 736  RTWDVCAHAVISEHAQQSGGGTFSSKYGSWENCVSAA 772


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