BLASTX nr result

ID: Coptis24_contig00005093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005093
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323530.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
ref|NP_190966.1| bifunctional inhibitor/lipid-transfer protein/s...   138   1e-30
ref|XP_002877950.1| protease inhibitor/seed storage/lipid transf...   138   2e-30
gb|AFK42353.1| unknown [Lotus japonicus]                              137   3e-30
gb|AFK41239.1| unknown [Lotus japonicus]                              137   3e-30

>ref|XP_002323530.1| predicted protein [Populus trichocarpa] gi|222868160|gb|EEF05291.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  142 bits (357), Expect = 1e-31
 Identities = 71/118 (60%), Positives = 83/118 (70%)
 Frame = +3

Query: 324 MESSMKYICILGLLVITGFAGMERADGKGECGKESPDNVAFKLXXXXXXXXXXXXXVSNG 503
           ME+ +K+I +LGLLV+   AG   AD  GECGK SPDN A KL             VS+ 
Sbjct: 1   MEAPLKFIGLLGLLVLLSVAG--GADAAGECGKSSPDNEAMKLAPCAEAAQDEKAAVSDS 58

Query: 504 CCSQIKIMGQNPSCLCAVLLSNTAKMAGVDLATAITIPKRCNLANRPVGMKCGDYTLP 677
           CC Q+K MGQ PSCLCAV+LS+TAK +GV + TAITIPKRCN+ANRPVG KCG YTLP
Sbjct: 59  CCLQVKRMGQKPSCLCAVMLSDTAKASGVKIETAITIPKRCNIANRPVGYKCGGYTLP 116


>ref|NP_190966.1| bifunctional inhibitor/lipid-transfer protein/seed storage 2S
           albumin-like protein [Arabidopsis thaliana]
           gi|30693968|ref|NP_850700.1| bifunctional
           inhibitor/lipid-transfer protein/seed storage 2S
           albumin-like protein [Arabidopsis thaliana]
           gi|7630018|emb|CAB88360.1| putative protein [Arabidopsis
           thaliana] gi|27311679|gb|AAO00805.1| putative protein
           [Arabidopsis thaliana] gi|30102818|gb|AAP21327.1|
           At3g53980 [Arabidopsis thaliana]
           gi|332645646|gb|AEE79167.1| bifunctional
           inhibitor/lipid-transfer protein/seed storage 2S
           albumin-like protein [Arabidopsis thaliana]
           gi|332645647|gb|AEE79168.1| bifunctional
           inhibitor/lipid-transfer protein/seed storage 2S
           albumin-like protein [Arabidopsis thaliana]
          Length = 114

 Score =  138 bits (348), Expect = 1e-30
 Identities = 67/118 (56%), Positives = 79/118 (66%)
 Frame = +3

Query: 324 MESSMKYICILGLLVITGFAGMERADGKGECGKESPDNVAFKLXXXXXXXXXXXXXVSNG 503
           M +SMK++CILGL+++ G       DG GECG+ SPDN A KL             V  G
Sbjct: 1   MAASMKFLCILGLILLIGTV----VDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGG 56

Query: 504 CCSQIKIMGQNPSCLCAVLLSNTAKMAGVDLATAITIPKRCNLANRPVGMKCGDYTLP 677
           CC+QIK   QNP CLCA+LLS+TAK +GVD   A+TIPKRCN ANRPVG KCG YTLP
Sbjct: 57  CCTQIKRFSQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114


>ref|XP_002877950.1| protease inhibitor/seed storage/lipid transfer protein family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323788|gb|EFH54209.1| protease inhibitor/seed
           storage/lipid transfer protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score =  138 bits (347), Expect = 2e-30
 Identities = 67/118 (56%), Positives = 78/118 (66%)
 Frame = +3

Query: 324 MESSMKYICILGLLVITGFAGMERADGKGECGKESPDNVAFKLXXXXXXXXXXXXXVSNG 503
           M SS+K++CILGL+ + G       DG GECG+ SPDN A KL             V  G
Sbjct: 1   MASSIKFLCILGLIFLVGAV----VDGAGECGRSSPDNEAMKLAPCAGAAQDANTAVPGG 56

Query: 504 CCSQIKIMGQNPSCLCAVLLSNTAKMAGVDLATAITIPKRCNLANRPVGMKCGDYTLP 677
           CC+QIK   QNP CLCA+LLS+TAK +GVD   A+TIPKRCN ANRPVG KCG YTLP
Sbjct: 57  CCTQIKRFSQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGPYTLP 114


>gb|AFK42353.1| unknown [Lotus japonicus]
          Length = 120

 Score =  137 bits (345), Expect = 3e-30
 Identities = 66/120 (55%), Positives = 81/120 (67%), Gaps = 2/120 (1%)
 Frame = +3

Query: 324 MESSMKYICILGLLV-ITGFAGMERADGKGECGK-ESPDNVAFKLXXXXXXXXXXXXXVS 497
           MES +K+IC++G +V +   AG  R +G GECG+  +PDN A KL             VS
Sbjct: 1   MESPIKFICLVGFVVLVVSIAGFHRVEGAGECGRYTTPDNEAMKLAPCAAAAQDENASVS 60

Query: 498 NGCCSQIKIMGQNPSCLCAVLLSNTAKMAGVDLATAITIPKRCNLANRPVGMKCGDYTLP 677
             CC+Q+K   QNP CLCAVLLSNTAKM+G+D   AITIPKRC+ ANRP+G KCG YTLP
Sbjct: 61  QSCCAQVKKFSQNPGCLCAVLLSNTAKMSGIDPKIAITIPKRCSFANRPIGYKCGSYTLP 120


>gb|AFK41239.1| unknown [Lotus japonicus]
          Length = 120

 Score =  137 bits (345), Expect = 3e-30
 Identities = 66/120 (55%), Positives = 81/120 (67%), Gaps = 2/120 (1%)
 Frame = +3

Query: 324 MESSMKYICILGLLV-ITGFAGMERADGKGECGK-ESPDNVAFKLXXXXXXXXXXXXXVS 497
           MES +K+IC++G +V +   AG  R +G GECG+  +PDN A KL             VS
Sbjct: 1   MESPIKFICLVGFVVLVVSIAGFHRVEGAGECGRYTTPDNEAMKLAPCATAAQDENASVS 60

Query: 498 NGCCSQIKIMGQNPSCLCAVLLSNTAKMAGVDLATAITIPKRCNLANRPVGMKCGDYTLP 677
             CC+Q+K   QNP CLCAVLLSNTAKM+G+D   AITIPKRC+ ANRP+G KCG YTLP
Sbjct: 61  QSCCAQVKKFSQNPGCLCAVLLSNTAKMSGIDPKIAITIPKRCSFANRPIGYKCGSYTLP 120


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