BLASTX nr result

ID: Coptis24_contig00005083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005083
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207...   105   7e-21
ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|2...   102   6e-20
gb|ABK96041.1| unknown [Populus trichocarpa]                          100   2e-19
ref|XP_002265767.1| PREDICTED: uncharacterized protein LOC100249...    99   6e-19
ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arab...    99   8e-19

>ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus]
           gi|449519980|ref|XP_004167012.1| PREDICTED:
           uncharacterized protein LOC101228588 [Cucumis sativus]
          Length = 176

 Score =  105 bits (262), Expect = 7e-21
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = -1

Query: 193 LWLQYDESKS*EMIERTIQNAPPGQGTTRMLSREEWDEIQEVRPRTPFESKLARPKARLR 14
           L + YDES+S E+IER I+NAPPGQGT RMLSR+EW+EI+EVRPRTPFESKLARP AR+R
Sbjct: 81  LLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIREVRPRTPFESKLARPNARIR 140

Query: 13  TDEP 2
           T EP
Sbjct: 141 TGEP 144


>ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|222838735|gb|EEE77100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  102 bits (254), Expect = 6e-20
 Identities = 57/91 (62%), Positives = 67/91 (73%)
 Frame = -1

Query: 274 ISVLCIAT*SCILTIELYYRTKLFIIWLWLQYDESKS*EMIERTIQNAPPGQGTTRMLSR 95
           +S L  AT   ILT+     T LF   L + YD+S S EMIER I+NAP GQGT RML+R
Sbjct: 64  LSFLDTATMPMILTV---VGTALFAKLL-MMYDDSHSQEMIERKIKNAPVGQGTVRMLTR 119

Query: 94  EEWDEIQEVRPRTPFESKLARPKARLRTDEP 2
           EEW+E +EVRPRTPFESKLARP AR+RT+EP
Sbjct: 120 EEWEEFREVRPRTPFESKLARPNARIRTEEP 150


>gb|ABK96041.1| unknown [Populus trichocarpa]
          Length = 108

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = -1

Query: 193 LWLQYDESKS*EMIERTIQNAPPGQGTTRMLSREEWDEIQEVRPRTPFESKLARPKARLR 14
           L + YD+S S EMIER I+NAP GQGT RML+REEW+E +EVRPRTPFESKLARP AR+R
Sbjct: 16  LLMMYDDSHSQEMIERKIKNAPVGQGTVRMLTREEWEEFREVRPRTPFESKLARPNARIR 75

Query: 13  TDEP 2
           T+EP
Sbjct: 76  TEEP 79


>ref|XP_002265767.1| PREDICTED: uncharacterized protein LOC100249204 [Vitis vinifera]
           gi|296084165|emb|CBI24553.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/64 (71%), Positives = 54/64 (84%)
 Frame = -1

Query: 193 LWLQYDESKS*EMIERTIQNAPPGQGTTRMLSREEWDEIQEVRPRTPFESKLARPKARLR 14
           L++ YD+SKS EM+ER I+NAP GQGT RML+REEWD IQEVRPRTPFESK +R  AR+R
Sbjct: 79  LFMMYDDSKSEEMVERKIKNAPAGQGTVRMLTREEWDAIQEVRPRTPFESKFSRHNARIR 138

Query: 13  TDEP 2
           T EP
Sbjct: 139 TGEP 142


>ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arabidopsis lyrata subsp.
           lyrata] gi|297329475|gb|EFH59894.1| hypothetical protein
           ARALYDRAFT_899238 [Arabidopsis lyrata subsp. lyrata]
          Length = 173

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -1

Query: 187 LQYDESKS*EMIERTIQNAPPGQGTTRMLSREEWDEIQEVRPRTPFESKLARPKARLRTD 8
           +  D+SKS EMIER I+NAPPGQGT R++ REEWDE +EVRPRTPFESKLARP A++RT 
Sbjct: 82  MMIDDSKSQEMIERKIKNAPPGQGTVRIIEREEWDEFREVRPRTPFESKLARPNAQIRTG 141

Query: 7   EP 2
           EP
Sbjct: 142 EP 143


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