BLASTX nr result

ID: Coptis24_contig00005082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005082
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]             100   5e-24
ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2...   100   5e-24
ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518...   100   5e-24
gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japo...   100   1e-23
ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group] g...   100   1e-23

>gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
          Length = 168

 Score = 99.8 bits (247), Expect(2) = 5e-24
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT
Sbjct: 97  KTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 146



 Score = 36.2 bits (82), Expect(2) = 5e-24
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 278 LADDKTAKEYNIEGGS 231
           LADDKTAKEYNIEGGS
Sbjct: 141 LADDKTAKEYNIEGGS 156



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 21  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 70


>ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
           gi|356556999|ref|XP_003546806.1| PREDICTED:
           ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
           gi|255627501|gb|ACU14095.1| unknown [Glycine max]
          Length = 154

 Score = 99.8 bits (247), Expect(2) = 5e-24
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT
Sbjct: 82  KTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131



 Score = 36.2 bits (82), Expect(2) = 5e-24
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 278 LADDKTAKEYNIEGGS 231
           LADDKTAKEYNIEGGS
Sbjct: 126 LADDKTAKEYNIEGGS 141



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55


>ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518872|gb|AET00496.1|
           Bi-ubiquitin [Medicago truncatula]
           gi|388497058|gb|AFK36595.1| unknown [Medicago
           truncatula]
          Length = 153

 Score = 99.8 bits (247), Expect(2) = 5e-24
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT
Sbjct: 82  KTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131



 Score = 36.2 bits (82), Expect(2) = 5e-24
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 278 LADDKTAKEYNIEGGS 231
           LADDKTAKEYNIEGGS
Sbjct: 126 LADDKTAKEYNIEGGS 141



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55


>gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japonica Group]
          Length = 208

 Score = 99.8 bits (247), Expect(2) = 1e-23
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT
Sbjct: 82  KTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131



 Score = 35.0 bits (79), Expect(2) = 1e-23
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -2

Query: 278 LADDKTAKEYNIEGGS 231
           LADDKTAK+YNIEGGS
Sbjct: 126 LADDKTAKDYNIEGGS 141



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55


>ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
           gi|255677281|dbj|BAF20135.2| Os06g0650100, partial
           [Oryza sativa Japonica Group]
          Length = 177

 Score = 99.8 bits (247), Expect(2) = 1e-23
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT
Sbjct: 106 KTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 155



 Score = 35.0 bits (79), Expect(2) = 1e-23
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -2

Query: 278 LADDKTAKEYNIEGGS 231
           LADDKTAK+YNIEGGS
Sbjct: 150 LADDKTAKDYNIEGGS 165



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -1

Query: 480 KTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 331
           KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 30  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 79


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