BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005077
         (3289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01215219.1| ribonuclease E [Psychromonas sp. CNPT3] gi|90...    61   2e-06
ref|XP_001942112.1| conserved hypothetical protein [Pyrenophora ...    60   5e-06
ref|ZP_22696845.1| hypothetical protein LEP1GSC083_RS20165 [Lept...    59   9e-06
ref|YP_005861450.1| hypothetical protein [Lactobacillus johnsoni...    59   9e-06

>ref|ZP_01215219.1| ribonuclease E [Psychromonas sp. CNPT3] gi|90311900|gb|EAS39995.1|
            ribonuclease E [Psychromonas sp. CNPT3]
          Length = 984

 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
 Frame = -2

Query: 2973 PEVVSAP-IIKTPEVASAPVIETL*VASALVIKTLEVVSAP-IVKTSEVASAP-VIKTPE 2803
            PEVV+AP ++ TPEV +AP +    VA+  V+ T EVV+AP +V  SEV + P V+ TPE
Sbjct: 844  PEVVAAPEVVATPEVVAAPAV----VATPEVVATPEVVAAPEVVAASEVVATPEVVATPE 899

Query: 2802 VAPTPIGKILEVAPALVVESPEVAPTPVAKISIPPVEKQSPETSSAEVASSFTAVQHEET 2623
            V  TP  +++      V+    +  T  AK S   V  Q  +T S+E+  S        T
Sbjct: 900  VVATP--EVVAAPEVAVITKKRIGTTSSAKKS---VTAQMKKTVSSELDLSAPLKIEAAT 954

Query: 2622 TRSSF--STEQ 2596
            TR S   ST+Q
Sbjct: 955  TRISIAKSTQQ 965


>ref|XP_001942112.1| conserved hypothetical protein [Pyrenophora tritici-repentis
            Pt-1C-BFP] gi|187979311|gb|EDU45937.1| conserved
            hypothetical protein [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 353

 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 72/223 (32%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
 Frame = -2

Query: 2991 SPVDKTPEVVSAPII-KTPEVASAPVI-ETL*VASALVI-------KTLEVVSAPIVKTS 2839
            S V  TP V S PI+  TP VAS PV+  TL VAS  ++        TL V S P+V ++
Sbjct: 91   SVVASTPVVASTPIVTSTPVVASTPVVASTLVVASTPIVTSTPVATSTLVVASTPVVAST 150

Query: 2838 EVASAPVI--KTPEVAPTP-------IGKILEVAPALVVES-------PEVAPTPVAKIS 2707
             VA++ +I   TP VA TP       +   L VA   VV S       P VA TP+  ++
Sbjct: 151  PVATSTLIVASTPVVASTPVVTSTPVVASTLVVASTPVVTSASVVASTPVVASTPI--VT 208

Query: 2706 IPPVEKQSPETSSAEVASSFTAVQHEETTRSSFSTEQNTLRSSNMLKHKTLS*AHRLHRL 2527
              PV   +P  +S  V +S   V       S+       + +S  +   TL  A      
Sbjct: 209  STPVVASTPVVASTLVVASTPIVTSTPVATSTLVVASTPVVASTPVATSTLIVASTPVVA 268

Query: 2526 SNSH*LKTYTSRNNSVRTLSVNHTLS*ANTLSAGNTISRNNTL 2398
            S        TS      TL V  TL  A+TL   +T+   +TL
Sbjct: 269  ST----PVVTSTPVVASTLVVASTLVVASTLVVASTLIVASTL 307


>ref|ZP_22696845.1| hypothetical protein LEP1GSC083_RS20165 [Leptospira interrogans
            serovar Pyrogenes str. L0374]
          Length = 142

 Score = 58.9 bits (141), Expect = 9e-06
 Identities = 37/99 (37%), Positives = 52/99 (52%)
 Frame = -1

Query: 3019 LKRYIASPLLSC*QDPRGRLRSYYQDPRGRLRSCYRDPVGRLRSCYQDPRGRLRSYCQDL 2840
            +KR+    + S  + P GR+ S  + P GR+ S  R P+GR+ S  + P GR+ S  +  
Sbjct: 7    IKRFPMGRVNSVKRFPMGRVNSVKRFPMGRVNSVKRFPMGRVNSVKRFPMGRVNSVKRFP 66

Query: 2839 RGRLRSCYQDPRGCPNSYWQDPRGRPRSCCRVPRGRTNS 2723
             GR+ S  + P G  NS  + P GR  S  R P GR NS
Sbjct: 67   MGRVNSVKRFPMGRVNSVKRFPMGRVNSIKRFPMGRVNS 105


>ref|YP_005861450.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
            gi|329666552|gb|AEB92500.1| hypothetical protein LJP_0161
            [Lactobacillus johnsonii DPC 6026]
          Length = 694

 Score = 58.9 bits (141), Expect = 9e-06
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
 Frame = -2

Query: 2988 PVDKTPEVVSAPIIKTPEVASAPVIETL*VASALVIKTLEVV---SAPIVKTSEV--ASA 2824
            P   TP  V AP  +  E  SAPV++   V +   +K  E V   + P+VK +EV  A A
Sbjct: 375  PAKTTPVKVEAPKAENKETNSAPVVKAPEVKTTNTVKNAETVKKETTPVVKVAEVKKAEA 434

Query: 2823 PVI---KTPEVAPTPIGKILEVAPALVVESPEVAPTPVAKISIPPVEKQSPETSSAEVAS 2653
            PV+   KT +   TP+ K+ EV  A   E+P V P    K    P  K +P   SA+V  
Sbjct: 435  PVVKPAKTVKKETTPVVKVAEVKKA---EAPVVKPVETVKKETTPAVKTTPVEESAKVVE 491

Query: 2652 SFTAVQHEETTRSSFSTEQNTLRSSNMLK 2566
            +   V+ ++       T   T+ +  ++K
Sbjct: 492  A-PVVKPKKVEVKEVKTTPVTISAKTVVK 519