BLASTX nr result

ID: Coptis24_contig00005074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005074
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589436.1| Protein kinase-like protein [Medicago trunca...    74   1e-11
ref|XP_003609560.1| hypothetical protein MTR_4g118580 [Medicago ...    73   3e-11
ref|XP_003589833.1| Protein kinase [Medicago truncatula] gi|3554...    73   4e-11
emb|CBI33939.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_003589837.1| Cytochrome P450 [Medicago truncatula] gi|355...    70   2e-10

>ref|XP_003589436.1| Protein kinase-like protein [Medicago truncatula]
           gi|357483357|ref|XP_003611965.1| Protein kinase-like
           protein [Medicago truncatula]
           gi|358344403|ref|XP_003636279.1| Protein kinase-like
           protein [Medicago truncatula]
           gi|355478484|gb|AES59687.1| Protein kinase-like protein
           [Medicago truncatula] gi|355502214|gb|AES83417.1|
           Protein kinase-like protein [Medicago truncatula]
           gi|355513300|gb|AES94923.1| Protein kinase-like protein
           [Medicago truncatula]
          Length = 85

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%)
 Frame = +1

Query: 286 SDT*EPQQQAVVMGTPPTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 438
           SD  + QQQA    +PP K NLISC+P+ HISDIKLIRTDTTLDLSQKAEK
Sbjct: 32  SDKQKTQQQATKAASPPQKSNLISCDPLDHISDIKLIRTDTTLDLSQKAEK 82


>ref|XP_003609560.1| hypothetical protein MTR_4g118580 [Medicago truncatula]
           gi|355510615|gb|AES91757.1| hypothetical protein
           MTR_4g118580 [Medicago truncatula]
          Length = 174

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = +1

Query: 289 DT*EPQQQAVVMGTPPTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 438
           D  +  ++A VM +PP K NLISC+P++HISDIKLIRTDTTLDLSQKAEK
Sbjct: 50  DLSQKAEKATVMTSPPQKSNLISCDPLSHISDIKLIRTDTTLDLSQKAEK 99



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = +1

Query: 289 DT*EPQQQAVVMGTPPTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 438
           D  E + QA  + +PP K NLISC+P+ HISDIKLIRTDTTLDLSQKAEK
Sbjct: 8   DREEIRLQATKVTSPPQKSNLISCDPLDHISDIKLIRTDTTLDLSQKAEK 57


>ref|XP_003589833.1| Protein kinase [Medicago truncatula] gi|355478881|gb|AES60084.1|
           Protein kinase [Medicago truncatula]
          Length = 188

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = +1

Query: 262 AQAVVQRMSDT*EPQQQAVVMGTPPTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 438
           A A+VQ   +T E     + M +PP K NLISCEP+ H+SDIKLIRTDTTLDLSQKAEK
Sbjct: 119 ANAIVQHTGNTREAL--LLKMASPPRKSNLISCEPLVHVSDIKLIRTDTTLDLSQKAEK 175


>emb|CBI33939.3| unnamed protein product [Vitis vinifera]
          Length = 99

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +1

Query: 289 DT*EPQQQAVVMGTPPTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 438
           D  +  ++A+VMG  P KINLISC  M+H+SDIKLIRTDTTLDLSQKAEK
Sbjct: 17  DLSQKAEKAIVMGPSPKKINLISCGTMSHVSDIKLIRTDTTLDLSQKAEK 66


>ref|XP_003589837.1| Cytochrome P450 [Medicago truncatula] gi|355478885|gb|AES60088.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 168

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = +1

Query: 310 QAVVMGTPPTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 438
           QA  + +PP K NLISCEP+ HISDIKLIRTDTTLDLSQKAEK
Sbjct: 5   QATKVTSPPQKSNLISCEPLVHISDIKLIRTDTTLDLSQKAEK 47


Top