BLASTX nr result

ID: Coptis24_contig00005065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005065
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282891.1| PREDICTED: protein DEHYDRATION-INDUCED 19 ho...   171   3e-40
gb|AFK46835.1| unknown [Lotus japonicus]                              167   5e-39
ref|XP_003631942.1| PREDICTED: protein DEHYDRATION-INDUCED 19 ho...   167   7e-39
ref|XP_002318968.1| predicted protein [Populus trichocarpa] gi|2...   167   7e-39
emb|CBI39563.3| unnamed protein product [Vitis vinifera]              163   7e-38

>ref|XP_002282891.1| PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3-like isoform 1
           [Vitis vinifera]
          Length = 220

 Score =  171 bits (433), Expect = 3e-40
 Identities = 83/143 (58%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
 Frame = +2

Query: 245 PCPFCTEDFDIIGLCCHIDDEHPAEAKDGVCPVCGTRVGMDMVGHIAMQHAQYFKMQRKK 424
           PCPFC+E FDI+GLCCHIDDEHP EAK+GVCP+C  RVG+DMV HI +QH   FKMQRK+
Sbjct: 45  PCPFCSEYFDIVGLCCHIDDEHPVEAKNGVCPICAIRVGVDMVAHITLQHGSVFKMQRKR 104

Query: 425 RFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXXXXXXPDPLLSSFIYNMPMFEEPKP 604
           + RKGGS S +SLLRKE+R+GNLQ                PDPLLSSFI  +PM ++   
Sbjct: 105 KTRKGGSHSTLSLLRKELREGNLQSLFGSSSCIVSSSSAAPDPLLSSFI--LPMADDYIG 162

Query: 605 VQP-CSSESSAVKKSLDERVSER 670
           VQP  S+++++ KK+ DE V ER
Sbjct: 163 VQPQLSAQTTSTKKNSDENVLER 185


>gb|AFK46835.1| unknown [Lotus japonicus]
          Length = 221

 Score =  167 bits (423), Expect = 5e-39
 Identities = 83/142 (58%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
 Frame = +2

Query: 248 CPFCTEDFDIIGLCCHIDDEHPAEAKDGVCPVCGTRVGMDMVGHIAMQHAQYFKMQRKKR 427
           CPFC+E FDI+GLCCHID+EHP EAK+GVCPVC +RVG+DMV HI +QH   FKMQRK++
Sbjct: 47  CPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCASRVGVDMVAHITLQHGNIFKMQRKRK 106

Query: 428 FRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXXXXXXPDPLLSSFIYNMPMFEEPKPV 607
            RKGGS S +SLLRKE+R+GNLQ                 DPLLSSFI   P+  EP   
Sbjct: 107 SRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNSAADPLLSSFI--SPLANEPTSS 164

Query: 608 QP-CSSESSAVKKSLDERVSER 670
           QP   +E+ + KKSLDE VS+R
Sbjct: 165 QPHLHTETRSTKKSLDETVSKR 186



 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = +3

Query: 816 DERVSERSLQPSPPLSDKDQEERASRCEFVQGMLLFTMFDDIL 944
           DE VS+R+++ +P LSDKD+EE A RCEFVQGMLL TM DD L
Sbjct: 180 DETVSKRNVE-TPALSDKDKEENAKRCEFVQGMLLSTMLDDDL 221


>ref|XP_003631942.1| PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Vitis
           vinifera]
          Length = 211

 Score =  167 bits (422), Expect = 7e-39
 Identities = 83/142 (58%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
 Frame = +2

Query: 248 CPFCTEDFDIIGLCCHIDDEHPAEAKDGVCPVCGTRVGMDMVGHIAMQHAQYFKMQRKKR 427
           CPFC EDFD++GLCCHID+EHP EAK+GVCPVC  RVGMD+V HI         +QR++R
Sbjct: 43  CPFCAEDFDVVGLCCHIDEEHPVEAKNGVCPVCAKRVGMDIVSHIT--------VQRRRR 94

Query: 428 FRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXXXXXXPDPLLSSFIYNMPMFEEPKPV 607
           FR+GGS S  S+LRKE+RDGNLQ                PDPLLSSF+YN P+  EP  V
Sbjct: 95  FRRGGSNSTFSILRKELRDGNLQSIFGGSSRIVSSSNSEPDPLLSSFMYNAPVVVEPVVV 154

Query: 608 QPCSS-ESSAVKKSLDERVSER 670
           QP SS E+S VK+S DE  SER
Sbjct: 155 QPDSSAEASVVKESSDEGFSER 176


>ref|XP_002318968.1| predicted protein [Populus trichocarpa] gi|222857344|gb|EEE94891.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  167 bits (422), Expect = 7e-39
 Identities = 82/143 (57%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
 Frame = +2

Query: 245 PCPFCTEDFDIIGLCCHIDDEHPAEAKDGVCPVCGTRVGMDMVGHIAMQHAQYFKMQRKK 424
           PCPFC+E FDI+GLCCHIDDEHP E+K+GVCPVC  RVG+DMV HI +QH   FKMQRK+
Sbjct: 45  PCPFCSEYFDIVGLCCHIDDEHPVESKNGVCPVCAMRVGVDMVAHITLQHGNIFKMQRKR 104

Query: 425 RFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXXXXXXPDPLLSSFIYNMPMFEEPKP 604
           + R+GG  S +SLLRKE+R+GNLQ                PDPLLSSFI  +PM ++   
Sbjct: 105 KSRRGGPHSTLSLLRKELREGNLQSLLGGSSCIVSSSNAAPDPLLSSFI--LPMVDDFTS 162

Query: 605 VQPC-SSESSAVKKSLDERVSER 670
            QP   SE+S+ KK  D  VSER
Sbjct: 163 SQPSFLSETSSAKKGTDGNVSER 185


>emb|CBI39563.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  163 bits (413), Expect = 7e-38
 Identities = 81/143 (56%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
 Frame = +2

Query: 245 PCPFCTEDFDIIGLCCHIDDEHPAEAKDGVCPVCGTRVGMDMVGHIAMQHAQYFKMQRKK 424
           PCPFC+E FDI+GLCCHIDDEHP EAK+GVCP+C  RVG+DMV HI +QH + + MQRK+
Sbjct: 45  PCPFCSEYFDIVGLCCHIDDEHPVEAKNGVCPICAIRVGVDMVAHITLQHGKSY-MQRKR 103

Query: 425 RFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXXXXXXPDPLLSSFIYNMPMFEEPKP 604
           + RKGGS S +SLLRKE+R+GNLQ                PDPLLSSFI  +PM ++   
Sbjct: 104 KTRKGGSHSTLSLLRKELREGNLQSLFGSSSCIVSSSSAAPDPLLSSFI--LPMADDYIG 161

Query: 605 VQP-CSSESSAVKKSLDERVSER 670
           VQP  S+++++ KK+ DE V ER
Sbjct: 162 VQPQLSAQTTSTKKNSDENVLER 184


Top