BLASTX nr result
ID: Coptis24_contig00005064
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005064 (1501 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26997.3| unnamed protein product [Vitis vinifera] 196 2e-47 ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vini... 193 1e-46 ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|2... 172 2e-40 ref|XP_003536676.1| PREDICTED: zinc finger protein 6-like [Glyci... 167 5e-39 ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|2... 167 5e-39 >emb|CBI26997.3| unnamed protein product [Vitis vinifera] Length = 260 Score = 196 bits (497), Expect = 2e-47 Identities = 128/266 (48%), Positives = 151/266 (56%), Gaps = 5/266 (1%) Frame = +1 Query: 283 SLMADIMDYQAKQXXXXXXXXXXXXXXXXXVVRLKLFGFNVSEEEEVDXXXXXXXXXXXX 462 SLMA+I DYQAK RLK+FGFNVSE+E+V+ Sbjct: 38 SLMAEI-DYQAKATSAPTNG------------RLKIFGFNVSEDEDVESSKTPSGSPESG 84 Query: 463 XXXTYPATDGRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMAANRTSSYASHVR 642 +PAT RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQM A R ++ S++R Sbjct: 85 G---FPATGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAA-TSYIR 140 Query: 643 NPMISAFSPPPHLL---XXXXXXXXXXXXXXXWVYMSSRTSSSVPPFHVSHGCVFQQPNS 813 NPMISAF+PPPHLL WVY+ PPFHVSHGCVF P+S Sbjct: 141 NPMISAFAPPPHLLAPAGPVVVPAGAAPQSASWVYV----PRGPPPFHVSHGCVF--PSS 194 Query: 814 SIIRSTPQMLTYAXXXXXXDMRTTVGLTQSMSQNQITSLHSXXXXXXXXXXXXXPSLSRF 993 S L+YA + T+ QS + ++ + PSLSRF Sbjct: 195 S--GRGAATLSYAGGVGESTLTTSA--PQSRAHGRVDA----------------PSLSRF 234 Query: 994 T--NSGPSFDDAFGLDLHLSLAPAAP 1065 + + GP+FDDAFGLDLHLSLAPAAP Sbjct: 235 SRGDGGPTFDDAFGLDLHLSLAPAAP 260 >ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vinifera] gi|147769067|emb|CAN72502.1| hypothetical protein VITISV_027276 [Vitis vinifera] Length = 221 Score = 193 bits (490), Expect = 1e-46 Identities = 118/234 (50%), Positives = 140/234 (59%), Gaps = 5/234 (2%) Frame = +1 Query: 379 RLKLFGFNVSEEEEVDXXXXXXXXXXXXXXXTYPATDGRKYECQYCCREFANSQALGGHQ 558 RLK+FGFNVSE+E+V+ +PAT RKYECQYCCREFANSQALGGHQ Sbjct: 18 RLKIFGFNVSEDEDVESSKTPSGSPESGG---FPATGDRKYECQYCCREFANSQALGGHQ 74 Query: 559 NAHKKERQQLKRAQMAANRTSSYASHVRNPMISAFSPPPHLL---XXXXXXXXXXXXXXX 729 NAHKKERQQLKRAQM A R ++ S++RNPMISAF+PPPHLL Sbjct: 75 NAHKKERQQLKRAQMQATRNAA-TSYIRNPMISAFAPPPHLLAPAGPVVVPAGAAPQSAS 133 Query: 730 WVYMSSRTSSSVPPFHVSHGCVFQQPNSSIIRSTPQMLTYAXXXXXXDMRTTVGLTQSMS 909 WVY+ PPFHVSHGCVF P+SS L+YA + T+ QS + Sbjct: 134 WVYV----PRGPPPFHVSHGCVF--PSSS--GRGAATLSYAGGVGESTLTTSA--PQSRA 183 Query: 910 QNQITSLHSXXXXXXXXXXXXXPSLSRFT--NSGPSFDDAFGLDLHLSLAPAAP 1065 ++ + PSLSRF+ + GP+FDDAFGLDLHLSLAPAAP Sbjct: 184 HGRVDA----------------PSLSRFSRGDGGPTFDDAFGLDLHLSLAPAAP 221 >ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|222863891|gb|EEF01022.1| predicted protein [Populus trichocarpa] Length = 247 Score = 172 bits (436), Expect = 2e-40 Identities = 114/250 (45%), Positives = 129/250 (51%), Gaps = 21/250 (8%) Frame = +1 Query: 379 RLKLFGFNVSEEEEV---------DXXXXXXXXXXXXXXXTYPAT---DGRKYECQYCCR 522 RLKLFGFNVSE+EE T PAT D RKYECQYCCR Sbjct: 16 RLKLFGFNVSEDEEQITTTDSLKSSSCNSPDDSSFATATTTVPATASGDSRKYECQYCCR 75 Query: 523 EFANSQALGGHQNAHKKERQQLKRAQMAANRTSSYA--SHVRNPMISAFSPPPHLLXXXX 696 EFANSQALGGHQNAHKKERQQLKRAQM A R ++ A S RNPMISAF+PPPHLL Sbjct: 76 EFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGRNPMISAFAPPPHLLAQAA 135 Query: 697 XXXXXXXXXXXWVYMSSRTSSSVPPFHVSHGCVFQQPNSSIIRSTPQMLTYAXXXXXXDM 876 WVY+ + PFHVSHGCVF S + L Y Sbjct: 136 GQVMVPAASPSWVYL----PRAATPFHVSHGCVFP---SGVSGRGGGGLPYGDSVGDFGF 188 Query: 877 RTTVGLTQSMSQNQ-----ITSLHSXXXXXXXXXXXXXPSLSRFT--NSGPSFDDAFGLD 1035 T+ Q++ + HS SLSRF+ + GP+FD+ GLD Sbjct: 189 STSASGPHQQLQSRAHFSSVVDDHS-----------GPTSLSRFSEGDDGPNFDEKLGLD 237 Query: 1036 LHLSLAPAAP 1065 LHLSLAPA P Sbjct: 238 LHLSLAPAGP 247 >ref|XP_003536676.1| PREDICTED: zinc finger protein 6-like [Glycine max] Length = 283 Score = 167 bits (424), Expect = 5e-39 Identities = 113/264 (42%), Positives = 136/264 (51%), Gaps = 35/264 (13%) Frame = +1 Query: 379 RLKLFGFNVSEEEEVDXXXXXXXXXXXXXXXTY---------------------PATDGR 495 RLKLFGF+V E+ +D P++ R Sbjct: 20 RLKLFGFSVHHEDIMDEDEVAHDDVADSTTKVTSSTSPSSPSDSPDSSVAGAGPPSSADR 79 Query: 496 KYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMAANRTSSYASHVRNPMISAFSPPP 675 KYECQYCCREFANSQALGGHQNAHKKERQQLKRAQ+ A+R ++ S VRNPMISAF+PPP Sbjct: 80 KYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAA-VSFVRNPMISAFAPPP 138 Query: 676 HLLXXXXXXXXXXXXXXXWVYMSSRTSSSVPPFH--VSHGCVFQQ----------PNSSI 819 HLL WVY+ R ++ PPFH VSHGC F +SS Sbjct: 139 HLL-APPGTVVVPAAPPSWVYVPPR--AAPPPFHVSVSHGCAFPSAHGNSNNNGFSSSSS 195 Query: 820 IRSTPQMLTYAXXXXXXDMRTTVGLTQSMSQNQITSLHSXXXXXXXXXXXXXPSLSRFT- 996 S +T M VG+ S ++++ PSLSRF+ Sbjct: 196 NNSNNVTITTGVKSAGAGMFPYVGVVGDSSSLALSTVQ--VQARAHHARIDGPSLSRFSK 253 Query: 997 -NSGPSFDDAFGLDLHLSLAPAAP 1065 +SGP FDDA+GLDLHLSLAPAAP Sbjct: 254 GDSGPKFDDAWGLDLHLSLAPAAP 277 >ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|222852229|gb|EEE89776.1| predicted protein [Populus trichocarpa] Length = 245 Score = 167 bits (424), Expect = 5e-39 Identities = 115/242 (47%), Positives = 127/242 (52%), Gaps = 13/242 (5%) Frame = +1 Query: 379 RLKLFGFNVSEEEEV-------DXXXXXXXXXXXXXXXTYPAT-DGRKYECQYCCREFAN 534 RLKLFGFNVSE+EE+ T AT D RKYECQYC REFAN Sbjct: 18 RLKLFGFNVSEDEELIATTYSSSLKSSSCNTPDSSSFGTATATGDSRKYECQYCSREFAN 77 Query: 535 SQALGGHQNAHKKERQQLKRAQMAANRTSSYA--SHVRNPMISAFSPPPHLLXXXXXXXX 708 SQALGGHQNAHKKERQQLKRAQM A R ++ A S RNPMISAF+PPPHLL Sbjct: 78 SQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGRNPMISAFAPPPHLLAQAAGQVV 137 Query: 709 XXXXXXXWVYMSSRTSSSVPPFHVSHGCVFQQPNSSIIRSTPQMLTYAXXXXXXDMRTTV 888 WVY+ + PPFHVSHG VF + + LTY Sbjct: 138 VPEASQSWVYL----PRAAPPFHVSHGSVFPR---GVGGRGVGSLTYGGSVG------DF 184 Query: 889 GLTQSMSQNQITSLHSXXXXXXXXXXXXXP-SLSRFTNS--GPSFDDAFGLDLHLSLAPA 1059 GL S S + S P SLSRF+ S GPSFDD LDLHLSL+PA Sbjct: 185 GLASSAS-GPYQQVQSRAHISRVIGDLNGPTSLSRFSKSDGGPSFDDKLSLDLHLSLSPA 243 Query: 1060 AP 1065 P Sbjct: 244 GP 245