BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005054
         (2437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec...  1226   0.0  
ref|XP_002517902.1| cleavage and polyadenylation specificity fac...  1193   0.0  
ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation spec...  1182   0.0  
ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation spec...  1180   0.0  
ref|XP_003533996.1| PREDICTED: cleavage and polyadenylation spec...  1177   0.0  

>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed
            protein product [Vitis vinifera]
          Length = 740

 Score = 1226 bits (3173), Expect = 0.0
 Identities = 607/740 (82%), Positives = 669/740 (90%), Gaps = 7/740 (0%)
 Frame = +2

Query: 89   MGTSVQVTPLSGVYNENPLCYLLSIDGFNILVDCGWNDLFDPNLLQPLSRVSSTIDAVLL 268
            MGTSVQVTPL GVYNENPL YL+SIDGFN LVDCGWND FDP+ LQPL+RV+STIDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSFLQPLARVASTIDAVLL 60

Query: 269  SHSDTIHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSXXXXXXXXXXX 448
            +H DT+HLGALPYAMKQLGLSAPVY+TEPVYRLGLLTMYD YLSRKQVS           
Sbjct: 61   AHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120

Query: 449  XAFQTITRLTYSQNYHLPGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 628
             AFQ +TRLTYSQNYHL GKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 629  RHLNGTVLESFVRPAVLITDAYNALNNQLPTRQRDKKFEDTILRTLRGDGNVLVPVDTAG 808
            R LNGTVLESFVRPAVLITDAYNALNNQ   RQRD++F D IL+TLRGDGNVL+PVDTAG
Sbjct: 181  RLLNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDVILKTLRGDGNVLLPVDTAG 240

Query: 809  RVLEILLILEQLWVQNHLSYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 988
            RVLE++LILEQ W Q+HL+YPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL
Sbjct: 241  RVLELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300

Query: 989  LKHVSLLLNKNDLENVPDGPKIVLVSMASLEYGFSHDLFVEWATDMKNLVFFTERGQFGT 1168
            LKHV+LL++K++LE VPDGPKIVL SMASLE GFSHD+FVEWATD KNLV F+ERGQF T
Sbjct: 301  LKHVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFAT 360

Query: 1169 LARMLQADPPPKAVKVTMRKRVPLVGEELRAYEEEQNRI-KEEAVKASLTKEEDLKASHG 1345
            LARMLQADPPPKAVKVTM KRVPLVGEEL AYEEEQ RI KEEA+KASL+KE+++KAS G
Sbjct: 361  LARMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASRG 420

Query: 1346 SDVNLGDPMVVDSNNAHASSDVTGPHSGGHRDTLIDGFVPPSTSVAPMFPFFENSSEWDD 1525
            SD  LGDPMV+D+    ASSDV  PH GGHRD LIDGFVPPSTSVAPMFPF+ENSSEWDD
Sbjct: 421  SDNKLGDPMVIDTTTPPASSDVAVPHVGGHRDILIDGFVPPSTSVAPMFPFYENSSEWDD 480

Query: 1526 FGEVINPDDYVIKEEDMDQSSIHV--DLDGKLDENSANLLLDSKPSKVVSNELTVQVKCS 1699
            FGEVINP+DYVIK+EDMDQ+++ V  DL+GKLDE +A+L+ D+ PSKV+SNELTVQVKC 
Sbjct: 481  FGEVINPEDYVIKDEDMDQATMQVGDDLNGKLDEGAASLIFDTTPSKVISNELTVQVKCM 540

Query: 1700 LVYMDFEGRSDGRSMKSVLAHVAPLKLVLVHGSAEATEHLKQHCTRHVCPHVYAPQIEET 1879
            LVYMDFEGRSDGRS+KS+L+HVAPLKLVLVHGSAEATEHLKQHC +HVCPHVYAPQI ET
Sbjct: 541  LVYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGET 600

Query: 1880 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEAGKTESDMLSVLPISTPPPPHK 2059
            IDVTSDLCAYKVQLSE+LMSNVLFKKLGDYE+AWVDAE GKTES  LS+LP+STPPP H 
Sbjct: 601  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTPPPSHD 660

Query: 2060 SVFVGDLKLADFKQFLASKGIPVEFSGGALRCGEFVTLRKIGDATQKG----TQQVVIEG 2227
            +VFVGD+K+ADFKQFLASKGI VEFSGGALRCGE+VTLRK+GDA+QKG     QQ+V+EG
Sbjct: 661  TVFVGDIKMADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDASQKGGGAIIQQIVMEG 720

Query: 2228 PLTEEYYKIREHLYSQFYLV 2287
            PL +EYYKIRE+LYSQ+YL+
Sbjct: 721  PLCDEYYKIREYLYSQYYLL 740


>ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223542884|gb|EEF44420.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 740

 Score = 1193 bits (3087), Expect = 0.0
 Identities = 591/741 (79%), Positives = 660/741 (89%), Gaps = 8/741 (1%)
 Frame = +2

Query: 89   MGTSVQVTPLSGVYNENPLCYLLSIDGFNILVDCGWNDLFDPNLLQPLSRVSSTIDAVLL 268
            MGTSVQVTPL+GVYNENPL YL+SID FN+L+DCGWND FDP+LLQPLSRV+STIDAVLL
Sbjct: 1    MGTSVQVTPLNGVYNENPLSYLISIDNFNLLIDCGWNDHFDPSLLQPLSRVASTIDAVLL 60

Query: 269  SHSDTIHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSXXXXXXXXXXX 448
            SHSDT+HLGALPYAMKQLGLSAPVY+TEPVYRLGLLTMYD YLSRK VS           
Sbjct: 61   SHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVSEFDLFSLDDID 120

Query: 449  XAFQTITRLTYSQNYHLPGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 628
             AFQ ITRLTYSQN+HL GKGEGIVIAPHVAGHLLGGTVWKITKDGEDV+YAVDFNHRKE
Sbjct: 121  SAFQNITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 629  RHLNGTVLESFVRPAVLITDAYNALNNQLPTRQRDKKF-EDTILRTLRGDGNVLVPVDTA 805
            RHLNGTVLESFVRPAVLITDAYNAL+NQ P +QRDK+F E TIL+TL   GNVL+PVDTA
Sbjct: 181  RHLNGTVLESFVRPAVLITDAYNALSNQPPRQQRDKEFLEKTILKTLEAGGNVLLPVDTA 240

Query: 806  GRVLEILLILEQLWVQNHLSYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 985
            GRVLE+LLILEQ W    L+YPIFFLTYV+SSTIDYVKSFLEWMSDSIAKSFE +RDNAF
Sbjct: 241  GRVLELLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNAF 300

Query: 986  LLKHVSLLLNKNDLENVPDGPKIVLVSMASLEYGFSHDLFVEWATDMKNLVFFTERGQFG 1165
            LLKHV+LL+NKN+L+N P+ PK+VL SMASLE GFSHD+FVEWA D+KNLV FTERGQFG
Sbjct: 301  LLKHVTLLINKNELDNAPNVPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQFG 360

Query: 1166 TLARMLQADPPPKAVKVTMRKRVPLVGEELRAYEEEQNRI-KEEAVKASLTKEEDLKASH 1342
            TLARMLQADPPPKAVKVTM +RVPLVG+EL AYEEEQ R+ KEE + AS+ KEE+ K SH
Sbjct: 361  TLARMLQADPPPKAVKVTMSRRVPLVGDELIAYEEEQKRLKKEEELNASMIKEEEAKVSH 420

Query: 1343 GSDVNLGDPMVVDSNNAHASSDVTGPHSGGHRDTLIDGFVPPSTSVAPMFPFFENSSEWD 1522
            G D NL DPM++D++N +AS D  G    G+RD L DGFVPPSTSVAPMFPF+EN++EWD
Sbjct: 421  GPDSNLSDPMIIDASNNNASLDAVGSQGTGYRDILFDGFVPPSTSVAPMFPFYENTTEWD 480

Query: 1523 DFGEVINPDDYVIKEEDMDQSSIHV--DLDGKLDENSANLLLDSKPSKVVSNELTVQVKC 1696
            DFGEVINPDDYVIK++DMDQ  +HV  D+DGK DE SA+ +LD+KPSKVVS+ELTVQVKC
Sbjct: 481  DFGEVINPDDYVIKDDDMDQ-PMHVGGDIDGKFDEGSASWILDTKPSKVVSSELTVQVKC 539

Query: 1697 SLVYMDFEGRSDGRSMKSVLAHVAPLKLVLVHGSAEATEHLKQHCTRHVCPHVYAPQIEE 1876
            SL+YMD+EGRSDGRS+KS+LAHVAPLKLVLVHGSAE+TEHLKQHC +HVCPHVYAPQIEE
Sbjct: 540  SLIYMDYEGRSDGRSIKSILAHVAPLKLVLVHGSAESTEHLKQHCLKHVCPHVYAPQIEE 599

Query: 1877 TIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEAGKTESDMLSVLPISTPPPPH 2056
            TIDVTSDLCAYKVQLSE+LMSNVLFKKLGD+EIAWVDAE GKTESD LS+LPIST  PPH
Sbjct: 600  TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDFEIAWVDAEVGKTESDALSLLPISTSAPPH 659

Query: 2057 KSVFVGDLKLADFKQFLASKGIPVEFSGGALRCGEFVTLRKIGDATQK----GTQQVVIE 2224
            KSV VGDLK+ADFKQFLASKG+ VEF+GGALRCGE+VTLRK+G+  QK    GTQQ+VIE
Sbjct: 660  KSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNINQKGGGSGTQQIVIE 719

Query: 2225 GPLTEEYYKIREHLYSQFYLV 2287
            GPL E+YYKIRE+LYSQFYL+
Sbjct: 720  GPLCEDYYKIREYLYSQFYLL 740


>ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform 1 [Glycine max]
          Length = 736

 Score = 1182 bits (3057), Expect = 0.0
 Identities = 580/739 (78%), Positives = 656/739 (88%), Gaps = 6/739 (0%)
 Frame = +2

Query: 89   MGTSVQVTPLSGVYNENPLCYLLSIDGFNILVDCGWNDLFDPNLLQPLSRVSSTIDAVLL 268
            MGTSVQVTPL GVYNENPL YL+SIDGFN LVDCGWND FDP+ LQPL+RV+STIDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60

Query: 269  SHSDTIHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSXXXXXXXXXXX 448
            SH+DT+HLGALPYAMK+LGLSAPVY+TEPVYRLGLLTMYD YLSRKQVS           
Sbjct: 61   SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 449  XAFQTITRLTYSQNYHLPGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 628
             AFQ++TRLTYSQN+H  GKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 629  RHLNGTVLESFVRPAVLITDAYNALNNQLPTRQRDKKFEDTILRTLRGDGNVLVPVDTAG 808
            RHLNGTVL SFVRPAVLITDAYNALNNQ   RQ DK+F D + +TLR  GNVL+PVDT G
Sbjct: 181  RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVG 240

Query: 809  RVLEILLILEQLWVQNHLSYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 988
            RVLE++L+LE  W   +L+YPI+FLTYVASSTIDYVKSFLEWMSD+IAKSFE TR+N FL
Sbjct: 241  RVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300

Query: 989  LKHVSLLLNKNDLENVPDGPKIVLVSMASLEYGFSHDLFVEWATDMKNLVFFTERGQFGT 1168
            LK+V+LL+NK +L+N PDGPK+VL SMASLE GFSHD+FVEWA D+KNLV FTERGQF T
Sbjct: 301  LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFAT 360

Query: 1169 LARMLQADPPPKAVKVTMRKRVPLVGEELRAYEEEQNRIKEEAVKASLTKEEDLKASHGS 1348
            LARMLQADPPPKAVKV + KRVPLVGEEL AYEEEQNRIK+EA+KASL KEE+LK SHG+
Sbjct: 361  LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGA 420

Query: 1349 DVNLGDPMVVDSNNAHASSDVTGPHSGGHRDTLIDGFVPPSTSVAPMFPFFENSSEWDDF 1528
            D ++ DPMV+DS N H   DVTGP  GG+RD  IDGFVPPSTSVAP+FP +EN+SEWDDF
Sbjct: 421  DNDISDPMVIDSGNNH---DVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDF 477

Query: 1529 GEVINPDDYVIKEEDMDQSSIH--VDLDGKLDENSANLLLDSKPSKVVSNELTVQVKCSL 1702
            GEVINPDDYVIK+EDMDQ+++H   D++GKLDE +A+L+LD+KPSKVVS+E TVQV+CSL
Sbjct: 478  GEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSL 537

Query: 1703 VYMDFEGRSDGRSMKSVLAHVAPLKLVLVHGSAEATEHLKQHCTRHVCPHVYAPQIEETI 1882
            VYMDFEGRSDGRS+K++L+HVAPLKLVLVHGSAEATEHLKQHC +HVCPHVYAPQIEETI
Sbjct: 538  VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETI 597

Query: 1883 DVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEAGKTESDMLSVLPISTPPPPHKS 2062
            DVTSDLCAYKVQLSE+LMSNVLFKKLGDYEIAWVDA  GKTE+D LS+LP+S   PPHKS
Sbjct: 598  DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHKS 657

Query: 2063 VFVGDLKLADFKQFLASKGIPVEFSGGALRCGEFVTLRKIGDATQK----GTQQVVIEGP 2230
            V VGDLKLAD KQFL+SKG+ VEF+GGALRCGE+VTLRK+GDA+QK    G QQ+VIEGP
Sbjct: 658  VLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEGP 717

Query: 2231 LTEEYYKIREHLYSQFYLV 2287
            L E+YYKIR++LYSQFYL+
Sbjct: 718  LCEDYYKIRDYLYSQFYLL 736


>ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Cucumis sativus]
          Length = 738

 Score = 1180 bits (3052), Expect = 0.0
 Identities = 579/739 (78%), Positives = 656/739 (88%), Gaps = 6/739 (0%)
 Frame = +2

Query: 89   MGTSVQVTPLSGVYNENPLCYLLSIDGFNILVDCGWNDLFDPNLLQPLSRVSSTIDAVLL 268
            MGTSVQVTPL GVYNENPL YL+S+D FN L+DCGWND FDP LLQPLSRV+STIDAVL+
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 269  SHSDTIHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSXXXXXXXXXXX 448
            SH DT+HLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD +++RKQVS           
Sbjct: 61   SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 449  XAFQTITRLTYSQNYHLPGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 628
             AFQ +TRLTYSQN+HL GKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 629  RHLNGTVLESFVRPAVLITDAYNALNNQLPTRQRDKKFEDTILRTLRGDGNVLVPVDTAG 808
            RHLNGT+LESFVRPAVLITDAYNALNNQ   RQ+DK+F DTI +TLR +GNVL+PVDTAG
Sbjct: 181  RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 809  RVLEILLILEQLWVQNHLSYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 988
            RVLE++ ILE  W +  L+YPIFFLTYVASSTIDY+KSFLEWMSD+IAKSFEHTR+NAFL
Sbjct: 241  RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 989  LKHVSLLLNKNDLENVPDGPKIVLVSMASLEYGFSHDLFVEWATDMKNLVFFTERGQFGT 1168
            LKHV+LL+NK++L+N PDGPK+VL SMASLE G+SHD+FV+WA D KNLV F+ERGQFGT
Sbjct: 301  LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 1169 LARMLQADPPPKAVKVTMRKRVPLVGEELRAYEEEQNRIKEEAVKASLTKEEDLKASHGS 1348
            LARMLQADPPPKAVKVT+ KRVPL G+EL AYEEEQNR KEEA+KASL KEE  KASHG+
Sbjct: 361  LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 1349 DVNLGDPMVVDSNNAHASSDVTGPHSGGHRDTLIDGFVPPSTSVAPMFPFFENSSEWDDF 1528
            D + GDPM++D+ +++ + DV   H G +RD LIDGFVPPST VAPMFPF+EN+S WDDF
Sbjct: 421  DNDTGDPMIIDA-SSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 479

Query: 1529 GEVINPDDYVIKEEDMDQSSIHV--DLDGKLDENSANLLLDSKPSKVVSNELTVQVKCSL 1702
            GEVINPDDYVIK+EDMDQ+++H   D+DGKLDE +ANL+LD KPSKVVSNELTVQVKCSL
Sbjct: 480  GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 539

Query: 1703 VYMDFEGRSDGRSMKSVLAHVAPLKLVLVHGSAEATEHLKQHCTRHVCPHVYAPQIEETI 1882
             YMDFEGRSDGRS+KS+L+HVAPLKLVLVHG+AEATEHLKQHC ++VCPHVYAPQIEETI
Sbjct: 540  HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 599

Query: 1883 DVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEAGKTESDMLSVLPISTPPPPHKS 2062
            DVTSDLCAYKVQLSE+LMSNVLFKKLGDYEI W+DAE GKTE+  LS+LP+S  P PHKS
Sbjct: 600  DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 659

Query: 2063 VFVGDLKLADFKQFLASKGIPVEFSGGALRCGEFVTLRKIGDATQK----GTQQVVIEGP 2230
            V VGDLK+ADFKQFLASKGI VEF+GGALRCGE+VTLRK+ DA+QK    GTQQVVIEGP
Sbjct: 660  VLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 719

Query: 2231 LTEEYYKIREHLYSQFYLV 2287
            L E+YYKIRE LYSQFYL+
Sbjct: 720  LCEDYYKIRELLYSQFYLL 738


>ref|XP_003533996.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform 2 [Glycine max]
          Length = 742

 Score = 1177 bits (3046), Expect = 0.0
 Identities = 579/742 (78%), Positives = 655/742 (88%), Gaps = 9/742 (1%)
 Frame = +2

Query: 89   MGTSVQVTPLSGVYNENPLCYLLSIDGFNILVDCGWNDLFDPNLLQPLSRVSSTIDAVLL 268
            MGTSVQVTPL GVYNENPL YL+SIDGFN LVDCGWND FDP+ LQPL+RV+STIDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60

Query: 269  SHSDTIHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSXXXXXXXXXXX 448
            SH+DT+HLGALPYAMK+LGLSAPVY+TEPVYRLGLLTMYD YLSRKQVS           
Sbjct: 61   SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 449  XAFQTITRLTYSQNYHLPGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 628
             AFQ++TRLTYSQN+H  GKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 629  RHLNGTVLESFVRPAVLITDAYNALNNQLPTRQRDKKFEDTIL---RTLRGDGNVLVPVD 799
            RHLNGTVL SFVRPAVLITDAYNALNNQ   RQ DK+F    L   +TLR  GNVL+PVD
Sbjct: 181  RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGGNHLFNLKTLRAGGNVLLPVD 240

Query: 800  TAGRVLEILLILEQLWVQNHLSYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDN 979
            T GRVLE++L+LE  W   +L+YPI+FLTYVASSTIDYVKSFLEWMSD+IAKSFE TR+N
Sbjct: 241  TVGRVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTREN 300

Query: 980  AFLLKHVSLLLNKNDLENVPDGPKIVLVSMASLEYGFSHDLFVEWATDMKNLVFFTERGQ 1159
             FLLK+V+LL+NK +L+N PDGPK+VL SMASLE GFSHD+FVEWA D+KNLV FTERGQ
Sbjct: 301  IFLLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQ 360

Query: 1160 FGTLARMLQADPPPKAVKVTMRKRVPLVGEELRAYEEEQNRIKEEAVKASLTKEEDLKAS 1339
            F TLARMLQADPPPKAVKV + KRVPLVGEEL AYEEEQNRIK+EA+KASL KEE+LK S
Sbjct: 361  FATLARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTS 420

Query: 1340 HGSDVNLGDPMVVDSNNAHASSDVTGPHSGGHRDTLIDGFVPPSTSVAPMFPFFENSSEW 1519
            HG+D ++ DPMV+DS N H   +VTGP  GG+RD  IDGFVPPSTSVAP+FP +EN+SEW
Sbjct: 421  HGADNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEW 480

Query: 1520 DDFGEVINPDDYVIKEEDMDQSSIH--VDLDGKLDENSANLLLDSKPSKVVSNELTVQVK 1693
            DDFGEVINPDDYVIK+EDMDQ+++H   D++GKLDE +A+L+LD+KPSKVVS+E TVQV+
Sbjct: 481  DDFGEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVR 540

Query: 1694 CSLVYMDFEGRSDGRSMKSVLAHVAPLKLVLVHGSAEATEHLKQHCTRHVCPHVYAPQIE 1873
            CSLVYMDFEGRSDGRS+K++L+HVAPLKLVLVHGSAEATEHLKQHC +HVCPHVYAPQIE
Sbjct: 541  CSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIE 600

Query: 1874 ETIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEAGKTESDMLSVLPISTPPPP 2053
            ETIDVTSDLCAYKVQLSE+LMSNVLFKKLGDYEIAWVDA  GKTE+D LS+LP+S   PP
Sbjct: 601  ETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPP 660

Query: 2054 HKSVFVGDLKLADFKQFLASKGIPVEFSGGALRCGEFVTLRKIGDATQK----GTQQVVI 2221
            HKSV VGDLKLAD KQFL+SKG+ VEF+GGALRCGE+VTLRK+GDA+QK    G QQ+VI
Sbjct: 661  HKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVI 720

Query: 2222 EGPLTEEYYKIREHLYSQFYLV 2287
            EGPL E+YYKIR++LYSQFYL+
Sbjct: 721  EGPLCEDYYKIRDYLYSQFYLL 742