BLASTX nr result

ID: Coptis24_contig00005050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005050
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    75   4e-12
ref|XP_004142381.1| PREDICTED: uncharacterized protein LOC101216...    75   4e-12
ref|XP_002297735.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002513024.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002262850.2| PREDICTED: uncharacterized protein LOC100248...    68   7e-10

>ref|XP_004157545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101216236
           [Cucumis sativus]
          Length = 1078

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/66 (56%), Positives = 42/66 (63%)
 Frame = -1

Query: 257 VLNCAKKGGMLELSEAIRDYHDSTFFPATNDTGSTDEFFLVTDXXXXXXXXXXXXXSLEV 78
           VLNCAKKG MLELS+AIRDYHD T FP  N++GS DEFFLVTD                 
Sbjct: 55  VLNCAKKGAMLELSDAIRDYHDLTGFPQMNNSGSGDEFFLVTDLDSSGSPPKRAPPPAPA 114

Query: 77  YTPSPI 60
           +TP P+
Sbjct: 115 FTPPPV 120


>ref|XP_004142381.1| PREDICTED: uncharacterized protein LOC101216236 [Cucumis sativus]
          Length = 1107

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/66 (56%), Positives = 42/66 (63%)
 Frame = -1

Query: 257 VLNCAKKGGMLELSEAIRDYHDSTFFPATNDTGSTDEFFLVTDXXXXXXXXXXXXXSLEV 78
           VLNCAKKG MLELS+AIRDYHD T FP  N++GS DEFFLVTD                 
Sbjct: 55  VLNCAKKGAMLELSDAIRDYHDLTGFPQMNNSGSGDEFFLVTDLDSSGSPPKRAPPPAPA 114

Query: 77  YTPSPI 60
           +TP P+
Sbjct: 115 FTPPPV 120


>ref|XP_002297735.1| predicted protein [Populus trichocarpa] gi|222844993|gb|EEE82540.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/66 (54%), Positives = 41/66 (62%)
 Frame = -1

Query: 257 VLNCAKKGGMLELSEAIRDYHDSTFFPATNDTGSTDEFFLVTDXXXXXXXXXXXXXSLEV 78
           VLNC KKGGMLELSEAIRDYHD+T  P  N+TGS DEFFLVT                 +
Sbjct: 55  VLNCVKKGGMLELSEAIRDYHDNTGLPHMNNTGSVDEFFLVTKPETSGSPPKRAPPPAPI 114

Query: 77  YTPSPI 60
             P+P+
Sbjct: 115 SAPNPV 120


>ref|XP_002513024.1| conserved hypothetical protein [Ricinus communis]
           gi|223548035|gb|EEF49527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1520

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/66 (53%), Positives = 42/66 (63%)
 Frame = -1

Query: 257 VLNCAKKGGMLELSEAIRDYHDSTFFPATNDTGSTDEFFLVTDXXXXXXXXXXXXXSLEV 78
           VLNCAKKGGMLELS+AIRDYHD+T  P  N+  S  EFFLVT+              + V
Sbjct: 480 VLNCAKKGGMLELSDAIRDYHDNTDLPHMNNGSSAAEFFLVTNPDSSGSPPKRAPPPIPV 539

Query: 77  YTPSPI 60
            TP+P+
Sbjct: 540 STPAPV 545


>ref|XP_002262850.2| PREDICTED: uncharacterized protein LOC100248009 [Vitis vinifera]
          Length = 1126

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = -1

Query: 257 VLNCAKKGGMLELSEAIRDYHDSTFFPATNDTGSTDEFFLVTD 129
           VL+C+KKG M+ELSEAIR+YHDST FP  N+TGS +EFFLVT+
Sbjct: 55  VLSCSKKGAMVELSEAIREYHDSTEFPNMNNTGSANEFFLVTN 97


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