BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005048
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539372.1| PREDICTED: COP9 signalosome complex subunit ...   107   7e-38
ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus comm...   107   2e-37
ref|XP_003534411.1| PREDICTED: COP9 signalosome complex subunit ...   106   2e-37
gb|ACJ85078.1| unknown [Medicago truncatula]                          105   4e-36
gb|ACJ85840.1| unknown [Medicago truncatula]                          105   4e-36

>ref|XP_003539372.1| PREDICTED: COP9 signalosome complex subunit 4-like [Glycine max]
          Length = 397

 Score =  107 bits (267), Expect(2) = 7e-38
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +3

Query: 240 RQLLQSFSQDLGTLEPEAQKEIAHYALVQIQPRVVSFEEQVLIIREKLAELYESEEQWSR 419
           RQLLQ+F+Q+LG LEPE QKEIAHYAL QIQPRVVSFEEQVL+IREKLAELYESE+QWS+
Sbjct: 55  RQLLQTFAQELGRLEPEIQKEIAHYALAQIQPRVVSFEEQVLVIREKLAELYESEKQWSK 114

Query: 420 A 422
           A
Sbjct: 115 A 115



 Score = 75.1 bits (183), Expect(2) = 7e-38
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = +1

Query: 34  MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHM 165
           MESA ASASAITDQRQKIEQYKQIL  V++SND+ QA+KFIDHM
Sbjct: 1   MESAFASASAITDQRQKIEQYKQILAAVISSNDIVQARKFIDHM 44


>ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus communis]
           gi|223551060|gb|EEF52546.1| cop9 complex subunit,
           putative [Ricinus communis]
          Length = 397

 Score =  107 bits (266), Expect(2) = 2e-37
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = +3

Query: 240 RQLLQSFSQDLGTLEPEAQKEIAHYALVQIQPRVVSFEEQVLIIREKLAELYESEEQWSR 419
           RQLLQSF+Q+LG LEP+ QKEIAHY L QIQPRVVSFEEQVLIIREKLAELYESE+QWS+
Sbjct: 55  RQLLQSFAQELGRLEPDTQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSK 114

Query: 420 A 422
           A
Sbjct: 115 A 115



 Score = 74.3 bits (181), Expect(2) = 2e-37
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = +1

Query: 34  MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHM 165
           MESA ASASAITDQRQKIEQYK IL +V++SND+ QAKKFIDHM
Sbjct: 1   MESAFASASAITDQRQKIEQYKHILASVISSNDIDQAKKFIDHM 44


>ref|XP_003534411.1| PREDICTED: COP9 signalosome complex subunit 4-like [Glycine max]
          Length = 397

 Score =  106 bits (264), Expect(2) = 2e-37
 Identities = 51/61 (83%), Positives = 58/61 (95%)
 Frame = +3

Query: 240 RQLLQSFSQDLGTLEPEAQKEIAHYALVQIQPRVVSFEEQVLIIREKLAELYESEEQWSR 419
           RQLLQ+F+Q+LG LEPE QKEIAHY+L QIQPRVVSFEEQVL+IREKLAELYESE+QWS+
Sbjct: 55  RQLLQTFAQELGRLEPEIQKEIAHYSLAQIQPRVVSFEEQVLVIREKLAELYESEKQWSK 114

Query: 420 A 422
           A
Sbjct: 115 A 115



 Score = 75.1 bits (183), Expect(2) = 2e-37
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = +1

Query: 34  MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHM 165
           MESA ASASAITDQRQKIEQYKQIL  V++SND+ QA+KFIDHM
Sbjct: 1   MESAFASASAITDQRQKIEQYKQILAAVISSNDIVQARKFIDHM 44


>gb|ACJ85078.1| unknown [Medicago truncatula]
          Length = 392

 Score =  105 bits (261), Expect(2) = 4e-36
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +3

Query: 240 RQLLQSFSQDLGTLEPEAQKEIAHYALVQIQPRVVSFEEQVLIIREKLAELYESEEQWSR 419
           RQLLQSF+++LG L PE QKEIAHY L QIQPRVVSFEEQVL+IREKLAELYESEEQWS+
Sbjct: 55  RQLLQSFAEELGRLAPETQKEIAHYILAQIQPRVVSFEEQVLVIREKLAELYESEEQWSK 114

Query: 420 A 422
           A
Sbjct: 115 A 115



 Score = 71.6 bits (174), Expect(2) = 4e-36
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +1

Query: 34  MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHM 165
           ME A ASASAITDQRQKIEQYKQIL+ V++SND+  A+KFIDHM
Sbjct: 1   MEGAFASASAITDQRQKIEQYKQILSAVISSNDILHARKFIDHM 44


>gb|ACJ85840.1| unknown [Medicago truncatula]
          Length = 335

 Score =  105 bits (261), Expect(2) = 4e-36
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +3

Query: 240 RQLLQSFSQDLGTLEPEAQKEIAHYALVQIQPRVVSFEEQVLIIREKLAELYESEEQWSR 419
           RQLLQSF+++LG L PE QKEIAHY L QIQPRVVSFEEQVL+IREKLAELYESEEQWS+
Sbjct: 55  RQLLQSFAEELGRLAPETQKEIAHYILAQIQPRVVSFEEQVLVIREKLAELYESEEQWSK 114

Query: 420 A 422
           A
Sbjct: 115 A 115



 Score = 71.6 bits (174), Expect(2) = 4e-36
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +1

Query: 34  MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHM 165
           ME A ASASAITDQRQKIEQYKQIL+ V++SND+  A+KFIDHM
Sbjct: 1   MEGAFASASAITDQRQKIEQYKQILSAVISSNDILHARKFIDHM 44