BLASTX nr result

ID: Coptis24_contig00005045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005045
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512715.1| conserved hypothetical protein [Ricinus comm...   112   3e-23
tpg|DAA37977.1| TPA: hypothetical protein ZEAMMB73_620234 [Zea m...   110   6e-23
ref|NP_001143628.1| uncharacterized protein LOC100276346 [Zea ma...   110   6e-23
gb|ACF88056.1| unknown [Zea mays] gi|219884571|gb|ACL52660.1| un...   110   6e-23
emb|CAH66532.1| H0502B11.12 [Oryza sativa Indica Group] gi|21819...   111   1e-22

>ref|XP_002512715.1| conserved hypothetical protein [Ricinus communis]
           gi|223548676|gb|EEF50167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score =  112 bits (280), Expect(2) = 3e-23
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = -2

Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442
           +LDMS+R LPGDHG PLQQ +PDVPP MADAVNRGSELLANLTVGTPWETVA+EV STLG
Sbjct: 346 MLDMSIRLLPGDHGLPLQQDLPDVPPAMADAVNRGSELLANLTVGTPWETVAKEVGSTLG 405

Query: 441 VD 436
           VD
Sbjct: 406 VD 407



 Score = 21.6 bits (44), Expect(2) = 3e-23
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 322 IASWMTSTMGSMLLKP 275
           I SW+ S  G  LL+P
Sbjct: 426 ITSWIASNTGPRLLRP 441


>tpg|DAA37977.1| TPA: hypothetical protein ZEAMMB73_620234 [Zea mays]
          Length = 451

 Score =  110 bits (275), Expect(2) = 6e-23
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 3/71 (4%)
 Frame = -2

Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442
           LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRG ELL NLT GTPWE VA+EV +TLG
Sbjct: 356 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGGELLTNLTTGTPWEAVAKEVGTTLG 415

Query: 441 VD---IKSQIS 418
            D   +++QIS
Sbjct: 416 TDSGILRAQIS 426



 Score = 22.7 bits (47), Expect(2) = 6e-23
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 322 IASWMTSTMGSMLLKP 275
           IASW +S  G  LL+P
Sbjct: 436 IASWTSSNSGPRLLRP 451


>ref|NP_001143628.1| uncharacterized protein LOC100276346 [Zea mays]
           gi|195623662|gb|ACG33661.1| hypothetical protein [Zea
           mays]
          Length = 451

 Score =  110 bits (275), Expect(2) = 6e-23
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 3/71 (4%)
 Frame = -2

Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442
           LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRG ELL NLT GTPWE VA+EV +TLG
Sbjct: 356 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGGELLTNLTTGTPWEAVAKEVGTTLG 415

Query: 441 VD---IKSQIS 418
            D   +++QIS
Sbjct: 416 TDSGILRAQIS 426



 Score = 22.7 bits (47), Expect(2) = 6e-23
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 322 IASWMTSTMGSMLLKP 275
           IASW +S  G  LL+P
Sbjct: 436 IASWTSSNSGPRLLRP 451


>gb|ACF88056.1| unknown [Zea mays] gi|219884571|gb|ACL52660.1| unknown [Zea mays]
           gi|414587407|tpg|DAA37978.1| TPA: hypothetical protein
           ZEAMMB73_620234 [Zea mays] gi|414587408|tpg|DAA37979.1|
           TPA: hypothetical protein ZEAMMB73_620234 [Zea mays]
          Length = 242

 Score =  110 bits (275), Expect(2) = 6e-23
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 3/71 (4%)
 Frame = -2

Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442
           LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRG ELL NLT GTPWE VA+EV +TLG
Sbjct: 147 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGGELLTNLTTGTPWEAVAKEVGTTLG 206

Query: 441 VD---IKSQIS 418
            D   +++QIS
Sbjct: 207 TDSGILRAQIS 217



 Score = 22.7 bits (47), Expect(2) = 6e-23
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 322 IASWMTSTMGSMLLKP 275
           IASW +S  G  LL+P
Sbjct: 227 IASWTSSNSGPRLLRP 242


>emb|CAH66532.1| H0502B11.12 [Oryza sativa Indica Group] gi|218194801|gb|EEC77228.1|
           hypothetical protein OsI_15775 [Oryza sativa Indica
           Group]
          Length = 457

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/71 (76%), Positives = 60/71 (84%), Gaps = 3/71 (4%)
 Frame = -2

Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442
           LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRGSELL NL  GTPWE VA+EV STLG
Sbjct: 362 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGSELLTNLATGTPWEAVAKEVGSTLG 421

Query: 441 VD---IKSQIS 418
            D   +++QIS
Sbjct: 422 ADSGVLRAQIS 432


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