BLASTX nr result
ID: Coptis24_contig00005045
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005045 (622 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512715.1| conserved hypothetical protein [Ricinus comm... 112 3e-23 tpg|DAA37977.1| TPA: hypothetical protein ZEAMMB73_620234 [Zea m... 110 6e-23 ref|NP_001143628.1| uncharacterized protein LOC100276346 [Zea ma... 110 6e-23 gb|ACF88056.1| unknown [Zea mays] gi|219884571|gb|ACL52660.1| un... 110 6e-23 emb|CAH66532.1| H0502B11.12 [Oryza sativa Indica Group] gi|21819... 111 1e-22 >ref|XP_002512715.1| conserved hypothetical protein [Ricinus communis] gi|223548676|gb|EEF50167.1| conserved hypothetical protein [Ricinus communis] Length = 441 Score = 112 bits (280), Expect(2) = 3e-23 Identities = 53/62 (85%), Positives = 57/62 (91%) Frame = -2 Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442 +LDMS+R LPGDHG PLQQ +PDVPP MADAVNRGSELLANLTVGTPWETVA+EV STLG Sbjct: 346 MLDMSIRLLPGDHGLPLQQDLPDVPPAMADAVNRGSELLANLTVGTPWETVAKEVGSTLG 405 Query: 441 VD 436 VD Sbjct: 406 VD 407 Score = 21.6 bits (44), Expect(2) = 3e-23 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -1 Query: 322 IASWMTSTMGSMLLKP 275 I SW+ S G LL+P Sbjct: 426 ITSWIASNTGPRLLRP 441 >tpg|DAA37977.1| TPA: hypothetical protein ZEAMMB73_620234 [Zea mays] Length = 451 Score = 110 bits (275), Expect(2) = 6e-23 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 3/71 (4%) Frame = -2 Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442 LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRG ELL NLT GTPWE VA+EV +TLG Sbjct: 356 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGGELLTNLTTGTPWEAVAKEVGTTLG 415 Query: 441 VD---IKSQIS 418 D +++QIS Sbjct: 416 TDSGILRAQIS 426 Score = 22.7 bits (47), Expect(2) = 6e-23 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 322 IASWMTSTMGSMLLKP 275 IASW +S G LL+P Sbjct: 436 IASWTSSNSGPRLLRP 451 >ref|NP_001143628.1| uncharacterized protein LOC100276346 [Zea mays] gi|195623662|gb|ACG33661.1| hypothetical protein [Zea mays] Length = 451 Score = 110 bits (275), Expect(2) = 6e-23 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 3/71 (4%) Frame = -2 Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442 LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRG ELL NLT GTPWE VA+EV +TLG Sbjct: 356 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGGELLTNLTTGTPWEAVAKEVGTTLG 415 Query: 441 VD---IKSQIS 418 D +++QIS Sbjct: 416 TDSGILRAQIS 426 Score = 22.7 bits (47), Expect(2) = 6e-23 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 322 IASWMTSTMGSMLLKP 275 IASW +S G LL+P Sbjct: 436 IASWTSSNSGPRLLRP 451 >gb|ACF88056.1| unknown [Zea mays] gi|219884571|gb|ACL52660.1| unknown [Zea mays] gi|414587407|tpg|DAA37978.1| TPA: hypothetical protein ZEAMMB73_620234 [Zea mays] gi|414587408|tpg|DAA37979.1| TPA: hypothetical protein ZEAMMB73_620234 [Zea mays] Length = 242 Score = 110 bits (275), Expect(2) = 6e-23 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 3/71 (4%) Frame = -2 Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442 LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRG ELL NLT GTPWE VA+EV +TLG Sbjct: 147 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGGELLTNLTTGTPWEAVAKEVGTTLG 206 Query: 441 VD---IKSQIS 418 D +++QIS Sbjct: 207 TDSGILRAQIS 217 Score = 22.7 bits (47), Expect(2) = 6e-23 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 322 IASWMTSTMGSMLLKP 275 IASW +S G LL+P Sbjct: 227 IASWTSSNSGPRLLRP 242 >emb|CAH66532.1| H0502B11.12 [Oryza sativa Indica Group] gi|218194801|gb|EEC77228.1| hypothetical protein OsI_15775 [Oryza sativa Indica Group] Length = 457 Score = 111 bits (277), Expect = 1e-22 Identities = 54/71 (76%), Positives = 60/71 (84%), Gaps = 3/71 (4%) Frame = -2 Query: 621 LLDMSVRSLPGDHGSPLQQVIPDVPPGMADAVNRGSELLANLTVGTPWETVAREVNSTLG 442 LLDMS+RSLPGDHG PLQQV+PDVPP MADAVNRGSELL NL GTPWE VA+EV STLG Sbjct: 362 LLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGSELLTNLATGTPWEAVAKEVGSTLG 421 Query: 441 VD---IKSQIS 418 D +++QIS Sbjct: 422 ADSGVLRAQIS 432