BLASTX nr result

ID: Coptis24_contig00005043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005043
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285300.1| PREDICTED: uncharacterized protein LOC100267...    75   6e-12
emb|CAN65717.1| hypothetical protein VITISV_023512 [Vitis vinifera]    75   6e-12
gb|AFK46098.1| unknown [Lotus japonicus]                               69   5e-10
gb|AFK45566.1| unknown [Lotus japonicus]                               69   5e-10
dbj|BAI63590.1| hypothetical protein [Lotus japonicus]                 69   5e-10

>ref|XP_002285300.1| PREDICTED: uncharacterized protein LOC100267955 [Vitis vinifera]
           gi|296081413|emb|CBI16846.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/50 (74%), Positives = 45/50 (90%)
 Frame = +2

Query: 5   KPTKFAVLIELLPLSRMPNGSVVVAVSVLPQNLISTKPKLLIKALISDGK 154
           K  + +VL+ELLPLSR+PNGS+VVAVSVLPQNLI+TKP+L IKAL+SD K
Sbjct: 282 KSPELSVLVELLPLSRVPNGSMVVAVSVLPQNLITTKPRLCIKALLSDTK 331


>emb|CAN65717.1| hypothetical protein VITISV_023512 [Vitis vinifera]
          Length = 371

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/50 (74%), Positives = 45/50 (90%)
 Frame = +2

Query: 5   KPTKFAVLIELLPLSRMPNGSVVVAVSVLPQNLISTKPKLLIKALISDGK 154
           K  + +VL+ELLPLSR+PNGS+VVAVSVLPQNLI+TKP+L IKAL+SD K
Sbjct: 291 KSPELSVLVELLPLSRVPNGSMVVAVSVLPQNLITTKPRLCIKALLSDTK 340


>gb|AFK46098.1| unknown [Lotus japonicus]
          Length = 212

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/50 (64%), Positives = 44/50 (88%)
 Frame = +2

Query: 14  KFAVLIELLPLSRMPNGSVVVAVSVLPQNLISTKPKLLIKALISDGKKMS 163
           + ++L+ELLPLSR+PNGS+VVAVS LP+NL+STKP+L +KAL S+ K+ S
Sbjct: 160 ELSILVELLPLSRVPNGSLVVAVSALPRNLVSTKPRLCVKALTSNTKEGS 209


>gb|AFK45566.1| unknown [Lotus japonicus]
          Length = 369

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/50 (64%), Positives = 44/50 (88%)
 Frame = +2

Query: 14  KFAVLIELLPLSRMPNGSVVVAVSVLPQNLISTKPKLLIKALISDGKKMS 163
           + ++L+ELLPLSR+PNGS+VVAVS LP+NL+STKP+L +KAL S+ K+ S
Sbjct: 317 ELSILVELLPLSRVPNGSLVVAVSALPRNLVSTKPRLCVKALTSNTKEGS 366


>dbj|BAI63590.1| hypothetical protein [Lotus japonicus]
          Length = 336

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/50 (64%), Positives = 44/50 (88%)
 Frame = +2

Query: 14  KFAVLIELLPLSRMPNGSVVVAVSVLPQNLISTKPKLLIKALISDGKKMS 163
           + ++L+ELLPLSR+PNGS+VVAVS LP+NL+STKP+L +KAL S+ K+ S
Sbjct: 284 ELSILVELLPLSRVPNGSLVVAVSALPRNLVSTKPRLCVKALTSNTKEGS 333


Top